RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 SRRM4A7MD48 611 aaKnown RBP12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 IGHV1-69P01742 117 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 ARHGDIBP52566 201 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 RAB32Q13637 225 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 CYB5R2Q6BCY4 276 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 SSX9Q7RTT3 188 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 VKORC1L1Q8N0U8 176 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 C17orf50Q8WW18 174 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 AJUBAQ96IF1 538 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 RHOVQ96L33 236 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 FAM90A9PA6NNJ1 464 aa12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 TIMM23O14925 209 aa12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 SHOXO15266 292 aa12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 AVPP01185 164 aa12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 MBPP02686 304 aaPredicted RBP12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 SAA4P35542 130 aa12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 NKX2-5P52952 324 aaPredicted RBP12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 HABP2Q14520 560 aaPredicted RBP12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 GPR157Q5UAW9 335 aa12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 C11orf87Q6NUJ2 197 aa12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 DYNAPQ8N1N2 210 aa12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 OR1S1Q8NH92 325 aa12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 ZFP57Q9NU63 452 aa12.85□□□□□ -0.35
SNRPD3-201ENST00000215829 TRAV40A0A0B4J280 105 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 SCGB1D2O95969 90 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 SLC25A4P12235 298 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 CD1BP29016 333 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 NKX2-1P43699 371 aaPredicted RBP12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 RPS16P62249 146 aaKnown RBP12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 ID3Q02535 119 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 CXorf66Q5JRM2 361 aaPredicted RBP12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 CIARTQ8N365 385 aaPredicted RBP12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 THAP6Q8TBB0 222 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 CFHR4Q92496 578 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 HARBI1Q96MB7 349 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 RNF126Q9BV68 326 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 MS4A7Q9GZW8 240 aaPredicted RBP12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 TMEM140Q9NV12 185 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 SVEP1Q4LDE5 3571 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 H0YIZ8 118 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 ST8SIA3O43173 380 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 OR9G9P0C7N8 305 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 PET100P0DJ07 73 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 LGALS7P47929 136 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 S100A10P60903 97 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 OR4A47Q6IF82 309 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 POMT1Q9Y6A1 747 aa12.84□□□□□ -0.35
SNRPD3-201ENST00000215829 CCDC168Q8NDH2 2452 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 IGHV3OR16-10A0A075B7F0 116 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 K7EPK0 472 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 RLN2P04090 185 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 IL6RP08887 468 aaPredicted RBP12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 IGHV4-38-2P0DP08 117 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 PAX6P26367 422 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 RUSC1-AS1Q66K80 236 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 PRSS54Q6PEW0 395 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 FOXRED2Q8IWF2 684 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 FAM71E2Q8N5Q1 922 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 RITA1Q96K30 269 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 RNF5Q99942 180 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 MBD2Q9UBB5 411 aa12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 LSM5Q9Y4Y9 91 aaKnown RBP12.83□□□□□ -0.36
SNRPD3-201ENST00000215829 FXYD6-FXYD2A0A087WZ82 144 aa12.82□□□□□ -0.36
SNRPD3-201ENST00000215829 HMSDA8MTL9 139 aa12.82□□□□□ -0.36
SNRPD3-201ENST00000215829 DEDDO75618 318 aa12.82□□□□□ -0.36
SNRPD3-201ENST00000215829 VENTXO95231 258 aa12.82□□□□□ -0.36
SNRPD3-201ENST00000215829 LYL1P12980 280 aa12.82□□□□□ -0.36
SNRPD3-201ENST00000215829 RELBQ01201 579 aa12.82□□□□□ -0.36
SNRPD3-201ENST00000215829 KLF17Q5JT82 389 aaPredicted RBP12.82□□□□□ -0.36
SNRPD3-201ENST00000215829 TMEM65Q6PI78 240 aa12.82□□□□□ -0.36
SNRPD3-201ENST00000215829 GRPEL2Q8TAA5 225 aa12.82□□□□□ -0.36
SNRPD3-201ENST00000215829 BET1LQ9NYM9 111 aa12.82□□□□□ -0.36
SNRPD3-201ENST00000215829 NSG2Q9Y328 171 aa12.82□□□□□ -0.36
SNRPD3-201ENST00000215829 FAM90A26D6RGX4 464 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 IGLV2-23P01705 113 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 SAA1P0DJI8 122 aaPredicted RBP12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 BRD3OSQ6XYD6 125 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 ZNF546Q86UE3 836 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 PUSL1Q8N0Z8 303 aaKnown RBP12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 OR4A16Q8NH70 328 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 OR5AC2Q9NZP5 309 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 TRAV3A0A0B4J244 114 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 SMAD7O15105 426 aaKnown RBP12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 RBMXL2O75526 392 aaKnown RBP12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 SNAPC5O75971 98 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 NXPH3O95157 252 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 POLR2GP62487 172 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 AARDQ4LEZ3 155 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 VSTM2AQ8TAG5 236 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 MAGT1Q9H0U3 335 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 ITGB1BP2Q9UKP3 347 aa12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 RCL1Q9Y2P8 373 aaKnown RBP12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 ZNF469Q96JG9 3925 aaPredicted RBP12.81□□□□□ -0.36
SNRPD3-201ENST00000215829 ITPR3Q14573 2671 aa12.8□□□□□ -0.36
SNRPD3-201ENST00000215829 UPK2O00526 184 aa12.8□□□□□ -0.36
SNRPD3-201ENST00000215829 MOSP00540 346 aa12.8□□□□□ -0.36
SNRPD3-201ENST00000215829 IGKV1D-33P01593 117 aa12.8□□□□□ -0.36
SNRPD3-201ENST00000215829 IGKV1-33P01594 117 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms