RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 A630095N17RikJ3KMM7 116 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm10666K7N6B8 321 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Vmn1r121K7N6J4 314 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Dcpp1L7N1X9 171 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Grap2O89100 322 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Fabp4P04117 132 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gsc2P56916 198 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mbd6Q3TY92 1003 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 2810408A11RikQ6NSU2 435 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mindy2Q6PDI6 601 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Nectin4Q8R007 508 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr488Q8VG02 314 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tstd3Q9D0B5 157 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mrpl13Q9D1P0 178 aaKnown RBP12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rnase6Q9D244 153 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr930Q9EQ99 308 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm3550W4VSN7 160 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Loxhd1C8YR32 2068 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr1326-ps1A0A140T8J7 311 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 4930444P10RikD3YUR1 185 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 4931429L15RikE9PVU2 379 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Hmgb3O54879 200 aaKnown RBP12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tlx3O55144 291 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 EnamO55196 1274 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Hprt1P00493 218 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Cxcl1P12850 96 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rab24P35290 203 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm10447Q3UQ92 135 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Arf2Q8BSL7 181 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Plcxd1Q8CHS4 345 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Crb3Q8QZT4 113 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rbpms2Q8VC52 206 aaKnown RBP12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr351Q8VGK1 310 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Acy1Q99JW2 408 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Kcnmb2Q9CZM9 235 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mrps30Q9D0G0 442 aaKnown RBP12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Spsb1Q9D5L7 273 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Golt1aQ9DCQ3 133 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Cisd3B1AR13 137 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr102B2RT33 308 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Aqp7O54794 303 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm10644Q3TZG3 87 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Fstl4Q5STE3 841 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Fbxo27Q6DIA9 280 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Smap2Q7TN29 428 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 MetrnQ8C1Q4 291 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rab4bQ91ZR1 213 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Nudt22Q9DD16 308 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Prg4Q9JM99 1054 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Angpt4Q9WVH6 509 aa12.8□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Fndc7A2AED3 737 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Vmn1r113G3UWI8 307 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Zfp36l1P23950 338 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tnfrsf4P47741 272 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 ElnP54320 860 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Lrrc30Q3UV48 300 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Taar6Q5QD13 345 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Npy6rQ61212 371 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr43Q7TRX1 313 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr403Q7TRX2 313 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mfsd8Q8BH31 519 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tox4Q8BU11 619 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rnf170Q8CBG9 286 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rab7bQ8VEA8 199 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr113Q8VEU4 312 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Lrrc26Q91W20 331 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Utp23Q9CX11 249 aaKnown RBP12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Htra3Q9D236 459 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Ms4a4bQ9ES61 226 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 NgfrQ9Z0W1 417 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tcrg-C4A0A075B6C7 190 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Scgb1b10A0A087WPW0 93 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Hsbp1l1B2RXB2 72 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 BC048679D3YXE9 172 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr1220F7BL62 311 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Ninj1O70131 152 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Zfp26P10076 861 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mas1P30554 324 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Nkpd1Q0VF94 599 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tas2r120Q7M721 295 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr1137Q7TR40 310 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tbl1xr1Q8BHJ5 514 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Plppr5Q8BJ52 321 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Vmn1r183Q8K3N5 305 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr530Q8VFE8 307 aa12.79□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm35060A0A140LIV7 231 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Trav12-1A0N8R1 115 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm43191F6YIH5 235 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 C3ar1O09047 477 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Bcl6bO88282 474 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 mt-Co3P00416 261 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 GusbP12265 648 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 CortP56469 109 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Nutf2P61971 127 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 S100a3P62818 101 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Il9rQ01114 468 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Fbxo7Q3U7U3 523 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Taar5Q5QD14 337 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rai1Q61818 1889 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Coq2Q66JT7 374 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms