RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Olfr992Q8VGC6 309 aa10.32□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Sytl3Q99N48 607 aa10.32□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm20806Q9D9T3 227 aa10.32□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr19Q9JHB2 309 aa10.32□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gpx2Q9JHC0 190 aa10.32□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1408Q8VG32 310 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tex101Q9JMI7 250 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Scn8aQ9WTU3 1978 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm44973A0A140LJJ1 189 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Ascl5M0QWB7 188 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Lbx1P52955 282 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Defb4P82019 63 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tmem18Q3TUD9 140 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Lhfpl5Q4KL25 219 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Oxgr1Q6IYF8 337 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1181Q7TR18 311 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr231E9Q0M4 307 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm8677K9J7G9 307 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Cst7O89098 144 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Kcnip4Q6PHZ8 250 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Smco4Q9JIS3 59 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 H1f0P10922 194 aaKnown RBP10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tex30Q3TUU5 225 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 BC100530Q497J0 97 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Q6DIA7 600 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr901Q7TRD1 311 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Aqp6Q8C4A0 293 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Aqp3Q8R2N1 292 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Prss28Q924N9 274 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Rpl11Q9CXW4 178 aaKnown RBP10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1154L7MU57 310 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Alx3O70137 343 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Muc13P19467 573 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Bst1Q64277 311 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tas2r114Q7M722 309 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1283Q7TQY4 305 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tmem106cQ80VP8 260 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1454Q8VFW2 307 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr50Q8VGK5 312 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Abhd14aQ922Q6 247 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Rgs21V9GXQ3 152 aa10.31□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tnfaip6O08859 275 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Prss39O70169 367 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 AesP63002 197 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr323Q5NCD0 323 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 BambiQ9D0L6 260 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 DnlzQ9D113 177 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Ammecr1Q9JHT5 344 aaKnown RBP10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Igkv9-123A0A140T8N8 117 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Lbhd2G3UW55 114 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Sdc1P18828 311 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 ArsbP50429 534 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 HrasQ61411 189 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Ewsr1Q61545 655 aaKnown RBP10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Zfp947Q8BIQ6 437 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Sfxn3Q91V61 321 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Nat8Q9JIY7 227 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Slurp1Q9Z0K7 110 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 1700025C18RikA2A580 89 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 PtgirP43252 415 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 MffQ6PCP5 291 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Vmn1r36Q8R2E3 305 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr76Q8VFV2 317 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 3100002H09RikQ9CXW6 140 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Trbv23A0A0A6YWQ1 115 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm4779A0A1B0GR91 561 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr282A1L1B4 308 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Spink14B9EJP9 96 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 B4galt1P15535 399 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Hoxd11P23813 323 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Acyp2P56375 106 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Lrrc52Q5M8M9 314 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Sft2d1Q5SSN7 159 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr153Q7TR48 307 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tsen54Q8C2A2 525 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Dhrs7cQ8CHS7 311 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Commd9Q8K2Q0 198 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Ctag2Q9D9S4 219 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Rab9aQ9R0M6 201 aa10.3□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Csrp1P97315 193 aaKnown RBP10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Zglp1Q1WG82 266 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Scarb1Q61009 509 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tmprss11dQ8VHK8 417 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Plp2Q9R1Q7 152 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1224-ps1A3KGY4 311 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Kcnk15B2RVL1 343 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Vmn1r195Q5SVD6 316 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Stpg2Q8C8J0 561 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Cdc34Q8CFI2 235 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Chrdl2Q8VEA6 426 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1271Q8VG62 305 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr638Q8VH20 321 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Trappc2lQ9JME7 139 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm20821J3QPJ2 227 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 P01638 115 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Egr1P08046 533 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 InmtP40936 264 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm5771Q792Y9 245 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr91Q7TRL3 312 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr335-psQ7TRY6 312 aa10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms