RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Fabp9O08716 132 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 H2-LP01897 362 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Cd8bP10300 213 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Mob3aQ8BSU7 217 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Zim1Q8C393 579 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Vmn1r66Q8K4I0 310 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Tmem54Q9D7S1 219 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Fthl17bA2AHC5 176 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Fthl17cA2AHC6 176 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr194L7N1Y8 306 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr203L7N205 307 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Vmn2r60L7N2A1 853 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 NrasP08556 189 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Apoc1P34928 88 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Slc45a2P58355 530 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Fthl17fQ3SXD2 176 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Gls2Q571F8 602 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Lrrc52Q5M8M9 314 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm12253Q5NC48 229 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr324Q5NCC7 333 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Epha5Q60629 876 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Adat3Q6PAT0 349 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 9430097D07RikQ8BS47 195 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 TskuQ8CBR6 354 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Poc1aQ8JZX3 405 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr829Q8VGX1 321 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Pdzd11Q9CZG9 140 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Mmp1aQ9EPL5 464 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Myoz1Q9JK37 296 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Eif3iQ9QZD9 325 aaKnown RBP14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Timm9Q9WV98 89 aaKnown RBP14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Mbd2Q9Z2E1 414 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Urb1Q571H0 2274 aaKnown RBP14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Rps2-ps6A0A140T8L5 221 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr64F8VPZ8 307 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Slc7a15Q50E62 488 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Stoml3Q6PE84 287 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Sys1Q78S06 156 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr923Q7TRB9 317 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Bcdin3dQ91YP1 285 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Atg12Q9CQY1 141 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Tmem88Q9D0N8 159 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Wbp2nlQ9D529 359 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Q9DAF8 208 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Tbl1xQ9QXE7 527 aa14.13□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm45808A0A1B0GSH8 263 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm12790B1AUV6 201 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm45692D3Z0A0 150 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Igh-3P01867 404 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Prkar2aP12367 401 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Pax6P63015 422 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm11110Q3U4K9 109 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr1111Q7TR55 312 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Cdk3Q80YP0 303 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Nmnat2Q8BNJ3 307 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Tmem100Q9CQG9 134 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Tmem208Q9CR96 173 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Lhfpl3Q9CTN8 222 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Spsb1Q9D5L7 273 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Ndufaf3Q9JKL4 185 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 4931429L15RikE9PVU2 379 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Ifna2P01573 190 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Igk-V19-17P01633 149 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 PilraQ2YFS3 302 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Trav8d-1Q5R1H8 112 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Scrt2Q8BTH6 311 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr512Q8VFZ4 326 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr156Q8VGA9 318 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Rpl7l1Q9D8M4 246 aaKnown RBP14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Q9D9C7 252 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Q9DAE8 263 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Chst1Q9EQC0 411 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 NmuQ9QXK8 174 aa14.12□□□□□ -0.15
Shh-201ENSMUST00000002708 Wdfy4E9Q2M9 3149 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm13083A2AGW5 501 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Eid2bE9Q2Y0 151 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Vmn1r129E9QA94 307 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Tex54G3UW99 86 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm8720K9J7F4 307 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 B4galt1P15535 399 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Sft2d1Q5SSN7 159 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 SargQ8BI29 606 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr186Q8VEX5 309 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr803Q8VFI3 308 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr1443Q8VFW8 312 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr802Q8VGJ2 312 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Rnf126Q91YL2 313 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Tmem128Q9CZB9 163 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Gpr34Q9R1K6 375 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm5678A0A1B0GRG8 277 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Foxl2O88470 375 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Evx1P23683 416 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Clec3bP43025 202 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Rnd3P61588 244 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Psg19Q4KL31 475 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Dhrs13Q5SS80 376 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Zfp455Q7M6X9 461 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Q8BG31 207 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 B4galt7Q8R087 327 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Lmo1Q924W9 156 aa14.11□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms