RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W TIM50Q02776 476 aa5.33□□□□□ -1.56
SSU72YNL222W UFO1Q04511 668 aa5.33□□□□□ -1.56
SSU72YNL222W CDC26P14724 124 aa5.32□□□□□ -1.56
SSU72YNL222W PRE4P30657 266 aa5.32□□□□□ -1.56
SSU72YNL222W DID4P36108 232 aa5.32□□□□□ -1.56
SSU72YNL222W CRG1P38892 291 aaRIP-Chip data5.32□□□□□ -1.56not detected
SSU72YNL222W YDR179W-AQ03983 463 aa5.32□□□□□ -1.56
SSU72YNL222W MDM20Q12387 796 aaKnown RBP5.32□□□□□ -1.56
SSU72YNL222W APM4Q99186 491 aa5.32□□□□□ -1.56
SSU72YNL222W BRN1P38170 754 aa5.31□□□□□ -1.56
SSU72YNL222W PAC2P39937 518 aa5.31□□□□□ -1.56
SSU72YNL222W ASN1P49089 572 aaKnown RBP5.31□□□□□ -1.56
SSU72YNL222W MRK1P50873 501 aa5.31□□□□□ -1.56
SSU72YNL222W RPA135P22138 1203 aaKnown RBP5.3□□□□□ -1.56
SSU72YNL222W DAL3P32459 195 aa5.3□□□□□ -1.56
SSU72YNL222W PMC1P38929 1173 aaPredicted RBP5.3□□□□□ -1.56
SSU72YNL222W FTR1P40088 404 aa5.3□□□□□ -1.56
SSU72YNL222W PRM2P40534 656 aa5.3□□□□□ -1.56
SSU72YNL222W DOS2P54858 310 aa5.3□□□□□ -1.56
SSU72YNL222W FDC1Q03034 503 aa5.3□□□□□ -1.56
SSU72YNL222W NSE5Q03718 556 aa5.3□□□□□ -1.56
SSU72YNL222W TRS23Q03784 219 aa5.3□□□□□ -1.56
SSU72YNL222W TPK2P06245 380 aa5.29□□□□□ -1.56
SSU72YNL222W CDS1P38221 457 aa5.29□□□□□ -1.56
SSU72YNL222W YHR033WP38690 423 aa5.29□□□□□ -1.56
SSU72YNL222W NGL2Q03264 515 aaKnown RBP5.29□□□□□ -1.56
SSU72YNL222W COQ11Q05892 277 aa5.29□□□□□ -1.56
SSU72YNL222W YNL162W-AQ3E7A8 72 aa5.29□□□□□ -1.56
SSU72YNL222W STE4P18851 423 aa5.28□□□□□ -1.56
SSU72YNL222W SAT4P25333 603 aaKnown RBP5.28□□□□□ -1.56
SSU72YNL222W PPE1P38796 400 aa5.28□□□□□ -1.56
SSU72YNL222W THI7Q05998 598 aa5.28□□□□□ -1.56
SSU72YNL222W YMC1P32331 307 aa5.27□□□□□ -1.57
SSU72YNL222W MTC7P32633 139 aa5.27□□□□□ -1.57
SSU72YNL222W SER1P33330 395 aaKnown RBP5.27□□□□□ -1.57
SSU72YNL222W MRPL7P36519 292 aa5.27□□□□□ -1.57
SSU72YNL222W YGR054WP53235 642 aaKnown RBP5.27□□□□□ -1.57
SSU72YNL222W FMP30Q02883 468 aa5.27□□□□□ -1.57
SSU72YNL222W MRI1Q06489 411 aaKnown RBP5.27□□□□□ -1.57
SSU72YNL222W ACO1P19414 778 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
SSU72YNL222W VPS34P22543 875 aa5.26□□□□□ -1.57
SSU72YNL222W MF(ALPHA)2P32435 120 aa5.26□□□□□ -1.57
SSU72YNL222W HXT4P32467 576 aa5.26□□□□□ -1.57
SSU72YNL222W UGP1P32861 499 aaKnown RBP5.26□□□□□ -1.57
SSU72YNL222W EHT1P38295 451 aa5.26□□□□□ -1.57
SSU72YNL222W UBP12P39538 1254 aa5.26□□□□□ -1.57
SSU72YNL222W RNR4P49723 345 aaKnown RBP5.26□□□□□ -1.57
SSU72YNL222W DAK1P54838 584 aaKnown RBP5.26□□□□□ -1.57
SSU72YNL222W HLR1Q04429 423 aa5.26□□□□□ -1.57
SSU72YNL222W OSW1Q08692 278 aa5.26□□□□□ -1.57
SSU72YNL222W HOM2P13663 365 aaKnown RBP5.25□□□□□ -1.57
SSU72YNL222W MDM10P18409 493 aa5.25□□□□□ -1.57
SSU72YNL222W YEN1P40028 759 aa5.25□□□□□ -1.57
SSU72YNL222W YIP4P53093 235 aa5.25□□□□□ -1.57
SSU72YNL222W MFM1Q02783 413 aa5.25□□□□□ -1.57
SSU72YNL222W YCG1Q06680 1035 aa5.25□□□□□ -1.57
SSU72YNL222W ULA1Q12059 462 aa5.25□□□□□ -1.57
SSU72YNL222W YPR027CQ12079 277 aa5.25□□□□□ -1.57
SSU72YNL222W ADE5,7P07244 802 aaKnown RBP5.24□□□□□ -1.57
SSU72YNL222W HMG2P12684 1045 aa5.24□□□□□ -1.57
SSU72YNL222W ATP12P22135 325 aa5.24□□□□□ -1.57
SSU72YNL222W DGR2P32330 852 aa5.24□□□□□ -1.57
SSU72YNL222W ENP2P48234 707 aaKnown RBP5.24□□□□□ -1.57
SSU72YNL222W EFR3Q03653 782 aaKnown RBP5.24□□□□□ -1.57
SSU72YNL222W SLK19Q08581 821 aaKnown RBP5.24□□□□□ -1.57
SSU72YNL222W AIM41Q12032 185 aa5.24□□□□□ -1.57
SSU72YNL222W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
SSU72YNL222W RMP1Q12530 201 aa5.24□□□□□ -1.57
SSU72YNL222W ORC2P32833 620 aa5.23□□□□□ -1.57
SSU72YNL222W THI6P41835 540 aa5.23□□□□□ -1.57
SSU72YNL222W YDL183CP48569 320 aa5.23□□□□□ -1.57
SSU72YNL222W NGL1Q08213 363 aaKnown RBP5.23□□□□□ -1.57
SSU72YNL222W RIM4P38741 713 aa5.22□□□□□ -1.57
SSU72YNL222W YEL025CP39991 1188 aa5.22□□□□□ -1.57
SSU72YNL222W GPP2P40106 250 aaKnown RBP5.22□□□□□ -1.57
SSU72YNL222W YGL117WP53133 265 aa5.22□□□□□ -1.57
SSU72YNL222W YGL081WP53156 320 aa5.22□□□□□ -1.57
SSU72YNL222W ERG11P10614 530 aa5.21□□□□□ -1.58
SSU72YNL222W EUG1P32474 517 aa5.21□□□□□ -1.58
SSU72YNL222W DUG1P43616 481 aaKnown RBP5.21□□□□□ -1.58
SSU72YNL222W CPR8P53728 308 aa5.21□□□□□ -1.58
SSU72YNL222W CEF1Q03654 590 aaPredicted RBP5.21□□□□□ -1.58
SSU72YNL222W SKY1Q03656 742 aa5.21□□□□□ -1.58
SSU72YNL222W ARG7Q04728 441 aa5.21□□□□□ -1.58
SSU72YNL222W YPL216WQ08964 1102 aa5.21□□□□□ -1.58
SSU72YNL222W RMA1P36001 430 aaKnown RBP5.2□□□□□ -1.58
SSU72YNL222W DHR2P36009 735 aaPredicted RBP5.2□□□□□ -1.58
SSU72YNL222W SNM1P40993 198 aa5.2□□□□□ -1.58
SSU72YNL222W TAX4P47030 604 aa5.2□□□□□ -1.58
SSU72YNL222W BUD17P53727 317 aa5.2□□□□□ -1.58
SSU72YNL222W SQS1P53866 767 aaKnown RBP5.2□□□□□ -1.58
SSU72YNL222W GRX4P32642 244 aa5.19□□□□□ -1.58
SSU72YNL222W PIH1P38768 344 aa5.19□□□□□ -1.58
SSU72YNL222W LRO1P40345 661 aa5.19□□□□□ -1.58
SSU72YNL222W NIT2P47016 307 aa5.19□□□□□ -1.58
SSU72YNL222W RIM13Q03792 727 aa5.19□□□□□ -1.58
SSU72YNL222W ZPS1Q12512 249 aa5.19□□□□□ -1.58
SSU72YNL222W LEU2P04173 364 aaPredicted RBP5.18□□□□□ -1.58
SSU72YNL222W HOP1P20050 605 aa5.18□□□□□ -1.58
SSU72YNL222W AEP2P22136 580 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms