RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	TUP1	P16649	713 aa		4.84	□□□□□ -1.63
SPO11	YHL022C	PRE4	P30657	266 aa		4.84	□□□□□ -1.63
SPO11	YHL022C	YMC1	P32331	307 aa		4.84	□□□□□ -1.63
SPO11	YHL022C	CRG1	P38892	291 aa	RIP-Chip data	4.84	□□□□□ -1.63	not detected
SPO11	YHL022C	TAF4	P50105	388 aa		4.84	□□□□□ -1.63
SPO11	YHL022C	SPO1	P53541	631 aa		4.84	□□□□□ -1.63
SPO11	YHL022C	TIM50	Q02776	476 aa		4.84	□□□□□ -1.63
SPO11	YHL022C	YDR179W-A	Q03983	463 aa		4.84	□□□□□ -1.63
SPO11	YHL022C	MRI1	Q06489	411 aa	Known RBP	4.84	□□□□□ -1.63
SPO11	YHL022C	STE4	P18851	423 aa		4.83	□□□□□ -1.64
SPO11	YHL022C	VPS34	P22543	875 aa		4.83	□□□□□ -1.64
SPO11	YHL022C	SAT4	P25333	603 aa	Known RBP	4.83	□□□□□ -1.64
SPO11	YHL022C	MNN11	P46985	422 aa	Known RBP	4.83	□□□□□ -1.64
SPO11	YHL022C	TRS23	Q03784	219 aa		4.83	□□□□□ -1.64
SPO11	YHL022C	PPN1	Q04119	674 aa		4.83	□□□□□ -1.64
SPO11	YHL022C	OSW1	Q08692	278 aa		4.83	□□□□□ -1.64
SPO11	YHL022C	CDS1	P38221	457 aa		4.82	□□□□□ -1.64
SPO11	YHL022C	FPR3	P38911	411 aa	Known RBP	4.82	□□□□□ -1.64
SPO11	YHL022C	VID28	P40547	921 aa		4.82	□□□□□ -1.64
SPO11	YHL022C	YGR237C	P50089	785 aa		4.82	□□□□□ -1.64
SPO11	YHL022C	FMP30	Q02883	468 aa		4.82	□□□□□ -1.64
SPO11	YHL022C	NGL2	Q03264	515 aa	Known RBP	4.82	□□□□□ -1.64
SPO11	YHL022C	TPK2	P06245	380 aa		4.81	□□□□□ -1.64
SPO11	YHL022C	HOM2	P13663	365 aa	Known RBP	4.81	□□□□□ -1.64
SPO11	YHL022C	CDC26	P14724	124 aa		4.81	□□□□□ -1.64
SPO11	YHL022C	UGP1	P32861	499 aa	Known RBP	4.81	□□□□□ -1.64
SPO11	YHL022C	PPE1	P38796	400 aa		4.81	□□□□□ -1.64
SPO11	YHL022C	FTR1	P40088	404 aa		4.81	□□□□□ -1.64
SPO11	YHL022C	PTA1	Q01329	785 aa	Predicted RBP	4.81	□□□□□ -1.64
SPO11	YHL022C	HFD1	Q04458	532 aa		4.81	□□□□□ -1.64
SPO11	YHL022C	FAP7	Q12055	197 aa	Predicted RBP	4.81	□□□□□ -1.64
SPO11	YHL022C	APM4	Q99186	491 aa		4.81	□□□□□ -1.64
SPO11	YHL022C	DID4	P36108	232 aa		4.8	□□□□□ -1.64
SPO11	YHL022C	PRM2	P40534	656 aa		4.8	□□□□□ -1.64
SPO11	YHL022C	FDC1	Q03034	503 aa		4.8	□□□□□ -1.64
SPO11	YHL022C	NSE5	Q03718	556 aa		4.8	□□□□□ -1.64
SPO11	YHL022C	ULA1	Q12059	462 aa		4.8	□□□□□ -1.64
SPO11	YHL022C	ADE5,7	P07244	802 aa	Known RBP	4.79	□□□□□ -1.64
SPO11	YHL022C	DAL3	P32459	195 aa		4.79	□□□□□ -1.64
SPO11	YHL022C	MTC7	P32633	139 aa		4.79	□□□□□ -1.64
SPO11	YHL022C	ORC2	P32833	620 aa		4.79	□□□□□ -1.64
SPO11	YHL022C	MRPL7	P36519	292 aa		4.79	□□□□□ -1.64
SPO11	YHL022C	YHR033W	P38690	423 aa		4.79	□□□□□ -1.64
SPO11	YHL022C	YGR054W	P53235	642 aa	Known RBP	4.79	□□□□□ -1.64
SPO11	YHL022C	SLK19	Q08581	821 aa	Known RBP	4.79	□□□□□ -1.64
SPO11	YHL022C	ERG11	P10614	530 aa		4.78	□□□□□ -1.64
SPO11	YHL022C	YIP4	P53093	235 aa		4.78	□□□□□ -1.64
SPO11	YHL022C	YGL117W	P53133	265 aa		4.78	□□□□□ -1.64
SPO11	YHL022C	DAK1	P54838	584 aa	Known RBP	4.78	□□□□□ -1.64
SPO11	YHL022C	ARG7	Q04728	441 aa		4.78	□□□□□ -1.64
SPO11	YHL022C	MF(ALPHA)2	P32435	120 aa		4.77	□□□□□ -1.65
SPO11	YHL022C	SER1	P33330	395 aa	Known RBP	4.77	□□□□□ -1.65
SPO11	YHL022C	EHT1	P38295	451 aa		4.77	□□□□□ -1.65
SPO11	YHL022C	MFM1	Q02783	413 aa		4.77	□□□□□ -1.65
SPO11	YHL022C	EFR3	Q03653	782 aa	Known RBP	4.77	□□□□□ -1.65
SPO11	YHL022C	HLR1	Q04429	423 aa		4.77	□□□□□ -1.65
SPO11	YHL022C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
SPO11	YHL022C	ATP12	P22135	325 aa		4.76	□□□□□ -1.65
SPO11	YHL022C	THI6	P41835	540 aa		4.76	□□□□□ -1.65
SPO11	YHL022C	TAX4	P47030	604 aa		4.76	□□□□□ -1.65
SPO11	YHL022C	YDL183C	P48569	320 aa		4.76	□□□□□ -1.65
SPO11	YHL022C	RIM13	Q03792	727 aa		4.76	□□□□□ -1.65
SPO11	YHL022C	HOF1	Q05080	669 aa		4.76	□□□□□ -1.65
SPO11	YHL022C	AAD3	P25612	363 aa		4.75	□□□□□ -1.65
SPO11	YHL022C	DGR2	P32330	852 aa		4.75	□□□□□ -1.65
SPO11	YHL022C	HXT4	P32467	576 aa		4.75	□□□□□ -1.65
SPO11	YHL022C	CPR8	P53728	308 aa		4.75	□□□□□ -1.65
SPO11	YHL022C	YCG1	Q06680	1035 aa		4.75	□□□□□ -1.65
SPO11	YHL022C	LEU2	P04173	364 aa	Predicted RBP	4.74	□□□□□ -1.65
SPO11	YHL022C	HMG2	P12684	1045 aa		4.74	□□□□□ -1.65
SPO11	YHL022C	CNE1	P27825	502 aa		4.74	□□□□□ -1.65
SPO11	YHL022C	NGL1	Q08213	363 aa	Known RBP	4.74	□□□□□ -1.65
SPO11	YHL022C	AIM41	Q12032	185 aa		4.74	□□□□□ -1.65
SPO11	YHL022C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
SPO11	YHL022C	NUP1	P20676	1076 aa		4.73	□□□□□ -1.65
SPO11	YHL022C	RMA1	P36001	430 aa	Known RBP	4.73	□□□□□ -1.65
SPO11	YHL022C	RIM4	P38741	713 aa		4.73	□□□□□ -1.65
SPO11	YHL022C	BUD17	P53727	317 aa		4.73	□□□□□ -1.65
SPO11	YHL022C	CEF1	Q03654	590 aa	Predicted RBP	4.73	□□□□□ -1.65
SPO11	YHL022C	ZPS1	Q12512	249 aa		4.73	□□□□□ -1.65
SPO11	YHL022C	PIH1	P38768	344 aa		4.72	□□□□□ -1.65
SPO11	YHL022C	UBP12	P39538	1254 aa		4.72	□□□□□ -1.65
SPO11	YHL022C	YEL025C	P39991	1188 aa		4.72	□□□□□ -1.65
SPO11	YHL022C	RNR4	P49723	345 aa	Known RBP	4.72	□□□□□ -1.65
SPO11	YHL022C	PIP2	P52960	996 aa		4.72	□□□□□ -1.65
SPO11	YHL022C	SEG1	Q04279	960 aa		4.72	□□□□□ -1.65
SPO11	YHL022C	ARR3	Q06598	404 aa		4.72	□□□□□ -1.65
SPO11	YHL022C	AFT2	Q08957	416 aa		4.72	□□□□□ -1.65
SPO11	YHL022C	YPL216W	Q08964	1102 aa		4.72	□□□□□ -1.65
SPO11	YHL022C	YPR027C	Q12079	277 aa		4.72	□□□□□ -1.65
SPO11	YHL022C	AI5_ALPHA	Q9ZZX1	630 aa		4.72	□□□□□ -1.65
SPO11	YHL022C	BRN1	P38170	754 aa		4.71	□□□□□ -1.66
SPO11	YHL022C	GPP2	P40106	250 aa	Known RBP	4.71	□□□□□ -1.66
SPO11	YHL022C	LRO1	P40345	661 aa		4.71	□□□□□ -1.66
SPO11	YHL022C	ENP2	P48234	707 aa	Known RBP	4.71	□□□□□ -1.66
SPO11	YHL022C	RPS15	Q01855	142 aa	Known RBP	4.71	□□□□□ -1.66
SPO11	YHL022C	CPA2	P03965	1118 aa	Known RBP	4.7	□□□□□ -1.66
SPO11	YHL022C	PMA2	P19657	947 aa		4.7	□□□□□ -1.66
SPO11	YHL022C	HOP1	P20050	605 aa		4.7	□□□□□ -1.66
SPO11	YHL022C	DHR2	P36009	735 aa	Predicted RBP	4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms