RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	SWM1	Q12379	170 aa		5.23	□□□□□ -1.57
UBC1	YDR177W	TPK1	P06244	397 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	PRE8	P23639	250 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	DBF4	P32325	704 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	CBF2	P32504	956 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	SAC6	P32599	642 aa	Known RBP	5.22	□□□□□ -1.57
UBC1	YDR177W	YBR259W	P38338	688 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	SRP72	P38688	640 aa	Known RBP	5.22	□□□□□ -1.57
UBC1	YDR177W	AKR1	P39010	764 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	PEX7	P39108	375 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	ECM1	P39715	212 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	DPH1	P40487	425 aa	Known RBP	5.22	□□□□□ -1.57
UBC1	YDR177W	GPD2	P41911	440 aa	Known RBP	5.22	□□□□□ -1.57
UBC1	YDR177W	IMA1	P53051	589 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	BUD9	P53226	547 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	SPO1	P53541	631 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	YNR071C	P53757	342 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	SRC1	Q03707	834 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	SYF1	Q04048	859 aa	Predicted RBP	5.22	□□□□□ -1.57
UBC1	YDR177W	YKU80	Q04437	629 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	STP4	Q07351	490 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	YOR352W	Q08816	343 aa		5.22	□□□□□ -1.57
UBC1	YDR177W	RTK1	Q12100	620 aa	Predicted RBP	5.22	□□□□□ -1.57
UBC1	YDR177W	RRG1	Q12167	365 aa	Predicted RBP	5.22	□□□□□ -1.57
UBC1	YDR177W	SEC12	P11655	471 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	MSB1	P21339	1137 aa	Known RBP	5.21	□□□□□ -1.58
UBC1	YDR177W	RIT1	P23796	513 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	KIN82	P25341	720 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	NPL6	P32832	435 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	MND2	P40577	368 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	OYE3	P41816	400 aa	Predicted RBP	5.21	□□□□□ -1.58
UBC1	YDR177W	PFA3	P42836	336 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	COX18	P53239	316 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	LEE1	Q02799	301 aa	Known RBP	5.21	□□□□□ -1.58
UBC1	YDR177W	GAS5	Q08193	484 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
UBC1	YDR177W	TRM8	Q12009	286 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	AIM41	Q12032	185 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	PHM7	Q12252	991 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	SPT7	P35177	1332 aa		5.21	□□□□□ -1.58
UBC1	YDR177W	GCN4	P03069	281 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	AI1	P03875	834 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	RPS9B	P05755	195 aa	Known RBP	5.2	□□□□□ -1.58
UBC1	YDR177W	CTT1	P06115	562 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	HOM3	P10869	527 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	RED1	P14291	827 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	COQ2	P32378	372 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	IFA38	P38286	347 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	TAH11	P47112	604 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	YML6	P51998	286 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	ASI2	P53895	289 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	ARG5,6	Q01217	863 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	RPT6	Q01939	405 aa	Known RBP	5.2	□□□□□ -1.58
UBC1	YDR177W	VPS64	Q03944	604 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	TAF11	Q04226	346 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	DIA2	Q08496	732 aa	Predicted RBP	5.2	□□□□□ -1.58
UBC1	YDR177W	DIN7	Q12086	430 aa		5.2	□□□□□ -1.58
UBC1	YDR177W	YLR302C	O13544	120 aa		5.19	□□□□□ -1.58
UBC1	YDR177W	SEC53	P07283	254 aa	Known RBP	5.19	□□□□□ -1.58
UBC1	YDR177W	HMG2	P12684	1045 aa		5.19	□□□□□ -1.58
UBC1	YDR177W	GCD7	P32502	381 aa	Predicted RBP	5.19	□□□□□ -1.58
UBC1	YDR177W	DHR2	P36009	735 aa	Predicted RBP	5.19	□□□□□ -1.58
UBC1	YDR177W	SAF1	P38352	637 aa		5.19	□□□□□ -1.58
UBC1	YDR177W	APE4	P38821	490 aa		5.19	□□□□□ -1.58
UBC1	YDR177W	YJR061W	P40355	935 aa		5.19	□□□□□ -1.58
UBC1	YDR177W	IST3	P40565	148 aa	Predicted RBP	5.19	□□□□□ -1.58
UBC1	YDR177W	MUS81	Q04149	632 aa	Predicted RBP	5.19	□□□□□ -1.58
UBC1	YDR177W	SNO4	Q04902	237 aa		5.19	□□□□□ -1.58
UBC1	YDR177W	HSP33	Q08914	237 aa	Known RBP	5.19	□□□□□ -1.58
UBC1	YDR177W	HSP32	Q08992	237 aa		5.19	□□□□□ -1.58
UBC1	YDR177W	RIB2	Q12362	591 aa	Known RBP	5.19	□□□□□ -1.58
UBC1	YDR177W	SMC6	Q12749	1114 aa		5.19	□□□□□ -1.58
UBC1	YDR177W	YLR415C	O13578	112 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	URA3	P03962	267 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	ADE3	P07245	946 aa	Known RBP	5.18	□□□□□ -1.58
UBC1	YDR177W	SES1	P07284	462 aa	Known RBP	5.18	□□□□□ -1.58
UBC1	YDR177W	CDC24	P11433	854 aa	Predicted RBP	5.18	□□□□□ -1.58
UBC1	YDR177W	MET8	P15807	274 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	SGF29	P25554	259 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	RKM3	P38222	552 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	MUM2	P38236	366 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	YBR138C	P38277	524 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	SIC1	P38634	284 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	VFA1	P40080	203 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	LYS14	P40971	790 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	BUD8	P41698	603 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	BST1	P43571	1029 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	ARC1	P46672	376 aa	Known RBP	5.18	□□□□□ -1.58
UBC1	YDR177W	MEH1	Q02205	184 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	YPL108W	Q02872	168 aa	Predicted RBP	5.18	□□□□□ -1.58
UBC1	YDR177W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
UBC1	YDR177W	YOR111W	Q99210	232 aa		5.18	□□□□□ -1.58
UBC1	YDR177W	BIK1	P11709	440 aa		5.17	□□□□□ -1.58
UBC1	YDR177W	CHS2	P14180	963 aa		5.17	□□□□□ -1.58
UBC1	YDR177W	IME1	P21190	360 aa		5.17	□□□□□ -1.58
UBC1	YDR177W	ADE2	P21264	571 aa	Known RBP	5.17	□□□□□ -1.58
UBC1	YDR177W	VPH1	P32563	840 aa	Known RBP	5.17	□□□□□ -1.58
UBC1	YDR177W	YBL029W	P38201	376 aa		5.17	□□□□□ -1.58
UBC1	YDR177W	UBP7	P40453	1071 aa		5.17	□□□□□ -1.58
UBC1	YDR177W	URM1	P40554	99 aa	Predicted RBP	5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms