RNA–Protein interactions for RNA: YDR059C

UBC5, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC5, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC5	YDR059C	MPS1	P54199	764 aa		4.93	□□□□□ -1.62
UBC5	YDR059C	TRS23	Q03784	219 aa		4.93	□□□□□ -1.62
UBC5	YDR059C	IRC3	Q06683	689 aa		4.93	□□□□□ -1.62
UBC5	YDR059C	PMA2	P19657	947 aa		4.92	□□□□□ -1.62
UBC5	YDR059C	RIM4	P38741	713 aa		4.92	□□□□□ -1.62
UBC5	YDR059C	PIH1	P38768	344 aa		4.92	□□□□□ -1.62
UBC5	YDR059C	ATG36	P46983	293 aa		4.92	□□□□□ -1.62
UBC5	YDR059C	ORM2	Q06144	216 aa		4.92	□□□□□ -1.62
UBC5	YDR059C	STP4	Q07351	490 aa		4.92	□□□□□ -1.62
UBC5	YDR059C	ZPS1	Q12512	249 aa		4.92	□□□□□ -1.62
UBC5	YDR059C	TDA3	P38758	523 aa		4.91	□□□□□ -1.62
UBC5	YDR059C	TMN3	P40071	706 aa		4.91	□□□□□ -1.62
UBC5	YDR059C	PSA1	P41940	361 aa	Known RBP	4.91	□□□□□ -1.62
UBC5	YDR059C	STP1	Q00947	519 aa		4.91	□□□□□ -1.62
UBC5	YDR059C	CEF1	Q03654	590 aa	Predicted RBP	4.91	□□□□□ -1.62
UBC5	YDR059C	PRE4	P30657	266 aa		4.9	□□□□□ -1.63
UBC5	YDR059C	YIP4	P53093	235 aa		4.9	□□□□□ -1.63
UBC5	YDR059C	HLR1	Q04429	423 aa		4.9	□□□□□ -1.63
UBC5	YDR059C	RPS17A	P02407	136 aa	Known RBP	4.89	□□□□□ -1.63
UBC5	YDR059C	RPL7A	P05737	244 aa	Known RBP	4.89	□□□□□ -1.63
UBC5	YDR059C	RPS17B	P14127	136 aa	Known RBP	4.89	□□□□□ -1.63
UBC5	YDR059C	MRPL7	P36519	292 aa		4.89	□□□□□ -1.63
UBC5	YDR059C	PPE1	P38796	400 aa		4.89	□□□□□ -1.63
UBC5	YDR059C	SCS3	P53012	380 aa		4.89	□□□□□ -1.63
UBC5	YDR059C	SDA1	P53313	767 aa	Known RBP	4.89	□□□□□ -1.63
UBC5	YDR059C	YDL073W	Q07454	984 aa		4.89	□□□□□ -1.63
UBC5	YDR059C	CIR2	Q08822	631 aa		4.89	□□□□□ -1.63
UBC5	YDR059C	RPL7B	Q12213	244 aa	Known RBP	4.89	□□□□□ -1.63
UBC5	YDR059C	CPA2	P03965	1118 aa	Known RBP	4.88	□□□□□ -1.63
UBC5	YDR059C	YUR1	P26725	428 aa		4.88	□□□□□ -1.63
UBC5	YDR059C	CKB2	P38930	258 aa		4.88	□□□□□ -1.63
UBC5	YDR059C	YGR054W	P53235	642 aa	Known RBP	4.88	□□□□□ -1.63
UBC5	YDR059C	NOP15	P53927	220 aa	Predicted RBP	4.88	□□□□□ -1.63
UBC5	YDR059C	MFM1	Q02783	413 aa		4.88	□□□□□ -1.63
UBC5	YDR059C	EFR3	Q03653	782 aa	Known RBP	4.88	□□□□□ -1.63
UBC5	YDR059C	NSE5	Q03718	556 aa		4.88	□□□□□ -1.63
UBC5	YDR059C	FPR4	Q06205	392 aa	Predicted RBP	4.88	□□□□□ -1.63
UBC5	YDR059C	HEM1	P09950	548 aa	Predicted RBP	4.87	□□□□□ -1.63
UBC5	YDR059C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
UBC5	YDR059C	CNE1	P27825	502 aa		4.87	□□□□□ -1.63
UBC5	YDR059C	BEM3	P32873	1128 aa		4.87	□□□□□ -1.63
UBC5	YDR059C	CRG1	P38892	291 aa	RIP-Chip data	4.87	□□□□□ -1.63	not detected
UBC5	YDR059C	FTR1	P40088	404 aa		4.87	□□□□□ -1.63
UBC5	YDR059C	IES1	P43579	692 aa		4.87	□□□□□ -1.63
UBC5	YDR059C	BPL1	P48445	690 aa	Predicted RBP	4.87	□□□□□ -1.63
UBC5	YDR059C	TAF4	P50105	388 aa		4.87	□□□□□ -1.63
UBC5	YDR059C	COQ6	P53318	479 aa		4.87	□□□□□ -1.63
UBC5	YDR059C	ATP23	P53722	227 aa		4.87	□□□□□ -1.63
UBC5	YDR059C	YNL018C	P53976	612 aa		4.87	□□□□□ -1.63
UBC5	YDR059C	NOP14	Q99207	810 aa	Known RBP	4.87	□□□□□ -1.63
UBC5	YDR059C	TUP1	P16649	713 aa		4.86	□□□□□ -1.63
UBC5	YDR059C	RPL8A	P17076	256 aa	Known RBP	4.86	□□□□□ -1.63
UBC5	YDR059C	RRP14	P36080	434 aa	Known RBP	4.86	□□□□□ -1.63
UBC5	YDR059C	YJR096W	P47137	282 aa		4.86	□□□□□ -1.63
UBC5	YDR059C	BUD17	P53727	317 aa		4.86	□□□□□ -1.63
UBC5	YDR059C	YPL068C	Q02749	293 aa		4.86	□□□□□ -1.63
UBC5	YDR059C	TIM50	Q02776	476 aa		4.86	□□□□□ -1.63
UBC5	YDR059C	YPL216W	Q08964	1102 aa		4.86	□□□□□ -1.63
UBC5	YDR059C	FRE7	Q12333	620 aa		4.86	□□□□□ -1.63
UBC5	YDR059C	YTA7	P40340	1379 aa		4.86	□□□□□ -1.63
UBC5	YDR059C	YMR084W	A2P2R3	262 aa		4.85	□□□□□ -1.63
UBC5	YDR059C	DUN1	P39009	513 aa		4.85	□□□□□ -1.63
UBC5	YDR059C	GEP3	Q08622	556 aa		4.85	□□□□□ -1.63
UBC5	YDR059C	WHI2	P12611	486 aa		4.84	□□□□□ -1.63
UBC5	YDR059C	SFP1	P32432	683 aa		4.84	□□□□□ -1.63
UBC5	YDR059C	ECM32	P32644	1121 aa	Known RBP	4.84	□□□□□ -1.63
UBC5	YDR059C	RPC34	P32910	317 aa		4.84	□□□□□ -1.63
UBC5	YDR059C	DHR2	P36009	735 aa	Predicted RBP	4.84	□□□□□ -1.63
UBC5	YDR059C	CDS1	P38221	457 aa		4.84	□□□□□ -1.63
UBC5	YDR059C	APD1	P38281	316 aa		4.84	□□□□□ -1.63
UBC5	YDR059C	NMD5	P46970	1048 aa		4.84	□□□□□ -1.63
UBC5	YDR059C	RPS15	Q01855	142 aa	Known RBP	4.84	□□□□□ -1.63
UBC5	YDR059C	HOP1	P20050	605 aa		4.83	□□□□□ -1.64
UBC5	YDR059C	SEC65	P29478	273 aa		4.83	□□□□□ -1.64
UBC5	YDR059C	PRM2	P40534	656 aa		4.83	□□□□□ -1.64
UBC5	YDR059C	YGR153W	P48238	217 aa		4.83	□□□□□ -1.64
UBC5	YDR059C	RPS21B	Q3E754	87 aa	Known RBP	4.83	□□□□□ -1.64
UBC5	YDR059C	AQY1	P0CD91	305 aa		4.82	□□□□□ -1.64
UBC5	YDR059C	MRPL9	P31334	269 aa		4.82	□□□□□ -1.64
UBC5	YDR059C	PRP19	P32523	503 aa	Known RBP	4.82	□□□□□ -1.64
UBC5	YDR059C	LOT5	P34234	306 aa		4.82	□□□□□ -1.64
UBC5	YDR059C	HXT6	P39003	570 aa	Known RBP	4.82	□□□□□ -1.64
UBC5	YDR059C	HXT7	P39004	570 aa		4.82	□□□□□ -1.64
UBC5	YDR059C	ALG12	P53730	551 aa		4.82	□□□□□ -1.64
UBC5	YDR059C	GFD1	Q04839	188 aa	Known RBP	4.82	□□□□□ -1.64
UBC5	YDR059C	TSR4	P25040	408 aa		4.81	□□□□□ -1.64
UBC5	YDR059C	CAP1	P28495	268 aa	Known RBP	4.81	□□□□□ -1.64
UBC5	YDR059C	YEL025C	P39991	1188 aa		4.81	□□□□□ -1.64
UBC5	YDR059C	ERG13	P54839	491 aa	Known RBP	4.81	□□□□□ -1.64
UBC5	YDR059C	TGS1	Q12052	315 aa		4.81	□□□□□ -1.64
UBC5	YDR059C	GLN4	P13188	809 aa	Known RBP	4.8	□□□□□ -1.64
UBC5	YDR059C	OAF3	P36023	863 aa		4.8	□□□□□ -1.64
UBC5	YDR059C	SNO3	P43544	222 aa		4.8	□□□□□ -1.64
UBC5	YDR059C	STB2	P46679	850 aa		4.8	□□□□□ -1.64
UBC5	YDR059C	YJL043W	P47053	257 aa		4.8	□□□□□ -1.64
UBC5	YDR059C	ECM9	Q02202	377 aa		4.8	□□□□□ -1.64
UBC5	YDR059C	TDA9	Q04545	1251 aa		4.8	□□□□□ -1.64
UBC5	YDR059C	AIM41	Q12032	185 aa		4.8	□□□□□ -1.64
UBC5	YDR059C	APM4	Q99186	491 aa		4.8	□□□□□ -1.64
UBC5	YDR059C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms