RNA–Protein interactions for RNA: YDL105W

NSE4, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE4, Length 1,209 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE4	YDL105W	YFT2	Q06676	274 aa		4.14	□□□□□ -1.75
NSE4	YDL105W	VPS36	Q06696	566 aa		4.14	□□□□□ -1.75
NSE4	YDL105W	YTM1	Q12024	460 aa	Predicted RBP	4.14	□□□□□ -1.75
NSE4	YDL105W	DCS2	Q12123	353 aa		4.14	□□□□□ -1.75
NSE4	YDL105W	FRS1	P15624	595 aa	Known RBP	4.13	□□□□□ -1.75
NSE4	YDL105W	TSR4	P25040	408 aa		4.13	□□□□□ -1.75
NSE4	YDL105W	MSS1	P32559	526 aa	Predicted RBP	4.13	□□□□□ -1.75
NSE4	YDL105W	PET127	P32606	800 aa		4.13	□□□□□ -1.75
NSE4	YDL105W	YPT7	P32939	208 aa		4.13	□□□□□ -1.75
NSE4	YDL105W	YEN1	P40028	759 aa		4.13	□□□□□ -1.75
NSE4	YDL105W	TAX4	P47030	604 aa		4.13	□□□□□ -1.75
NSE4	YDL105W	YDR179W-A	Q03983	463 aa		4.13	□□□□□ -1.75
NSE4	YDL105W	VBA4	Q04602	768 aa	Known RBP	4.13	□□□□□ -1.75
NSE4	YDL105W	RPS9B	P05755	195 aa	Known RBP	4.12	□□□□□ -1.75
NSE4	YDL105W	APN1	P22936	367 aa		4.12	□□□□□ -1.75
NSE4	YDL105W	GRX4	P32642	244 aa		4.12	□□□□□ -1.75
NSE4	YDL105W	RGT1	P32862	1170 aa		4.12	□□□□□ -1.75
NSE4	YDL105W	PRP22	P24384	1145 aa	Known RBP	4.11	□□□□□ -1.75
NSE4	YDL105W	DID4	P36108	232 aa		4.11	□□□□□ -1.75
NSE4	YDL105W	BEM4	P39011	633 aa		4.11	□□□□□ -1.75
NSE4	YDL105W	NUG1	P40010	520 aa	Known RBP	4.11	□□□□□ -1.75
NSE4	YDL105W	CCT5	P40413	562 aa	Known RBP	4.11	□□□□□ -1.75
NSE4	YDL105W	GPP1	P41277	250 aa	Known RBP	4.11	□□□□□ -1.75
NSE4	YDL105W	GPG1	P53130	126 aa		4.11	□□□□□ -1.75
NSE4	YDL105W	SNF12	P53628	566 aa		4.11	□□□□□ -1.75
NSE4	YDL105W	DAK1	P54838	584 aa	Known RBP	4.11	□□□□□ -1.75
NSE4	YDL105W	YMR210W	Q03649	449 aa		4.11	□□□□□ -1.75
NSE4	YDL105W	IZH3	Q07959	543 aa		4.11	□□□□□ -1.75
NSE4	YDL105W	CIR2	Q08822	631 aa		4.11	□□□□□ -1.75
NSE4	YDL105W	ELF1	P36053	145 aa		4.1	□□□□□ -1.75
NSE4	YDL105W	HOT13	P36078	116 aa		4.1	□□□□□ -1.75
NSE4	YDL105W	OAF1	P39720	1047 aa	Predicted RBP	4.1	□□□□□ -1.75
NSE4	YDL105W	ATG36	P46983	293 aa		4.1	□□□□□ -1.75
NSE4	YDL105W	MNN11	P46985	422 aa	Known RBP	4.1	□□□□□ -1.75
NSE4	YDL105W	ARG7	Q04728	441 aa		4.1	□□□□□ -1.75
NSE4	YDL105W	IMG2	P25642	146 aa	Predicted RBP	4.09	□□□□□ -1.75
NSE4	YDL105W	THI6	P41835	540 aa		4.09	□□□□□ -1.75
NSE4	YDL105W	YGL117W	P53133	265 aa		4.09	□□□□□ -1.75
NSE4	YDL105W	CPR8	P53728	308 aa		4.09	□□□□□ -1.75
NSE4	YDL105W	PTA1	Q01329	785 aa	Predicted RBP	4.09	□□□□□ -1.75
NSE4	YDL105W	ECM9	Q02202	377 aa		4.09	□□□□□ -1.75
NSE4	YDL105W	YHM2	Q04013	314 aa		4.09	□□□□□ -1.75
NSE4	YDL105W	TDA9	Q04545	1251 aa		4.09	□□□□□ -1.75
NSE4	YDL105W	MBR1	P23493	339 aa		4.08	□□□□□ -1.76
NSE4	YDL105W	SEC65	P29478	273 aa		4.08	□□□□□ -1.76
NSE4	YDL105W	YLR407W	Q06070	228 aa		4.08	□□□□□ -1.76
NSE4	YDL105W	SSB1	P11484	613 aa	Known RBP	4.07	□□□□□ -1.76
NSE4	YDL105W	STE4	P18851	423 aa		4.07	□□□□□ -1.76
NSE4	YDL105W	AAD3	P25612	363 aa		4.07	□□□□□ -1.76
NSE4	YDL105W	YKU70	P32807	602 aa		4.07	□□□□□ -1.76
NSE4	YDL105W	SSB2	P40150	613 aa	Known RBP	4.07	□□□□□ -1.76
NSE4	YDL105W	ULP2	P40537	1034 aa	Predicted RBP	4.07	□□□□□ -1.76
NSE4	YDL105W	PXA1	P41909	870 aa		4.07	□□□□□ -1.76
NSE4	YDL105W	YPL068C	Q02749	293 aa		4.07	□□□□□ -1.76
NSE4	YDL105W	ORM2	Q06144	216 aa		4.07	□□□□□ -1.76
NSE4	YDL105W	TRE2	Q08693	809 aa		4.07	□□□□□ -1.76
NSE4	YDL105W	AI5_ALPHA	Q9ZZX1	630 aa		4.07	□□□□□ -1.76
NSE4	YDL105W	SWI6	P09959	803 aa		4.06	□□□□□ -1.76
NSE4	YDL105W	OAF3	P36023	863 aa		4.06	□□□□□ -1.76
NSE4	YDL105W	RIM4	P38741	713 aa		4.06	□□□□□ -1.76
NSE4	YDL105W	PIH1	P38768	344 aa		4.06	□□□□□ -1.76
NSE4	YDL105W	HXT6	P39003	570 aa	Known RBP	4.06	□□□□□ -1.76
NSE4	YDL105W	HXT7	P39004	570 aa		4.06	□□□□□ -1.76
NSE4	YDL105W	DUG1	P43616	481 aa	Known RBP	4.06	□□□□□ -1.76
NSE4	YDL105W	STP1	Q00947	519 aa		4.06	□□□□□ -1.76
NSE4	YDL105W	PPN1	Q04119	674 aa		4.06	□□□□□ -1.76
NSE4	YDL105W	IRC3	Q06683	689 aa		4.06	□□□□□ -1.76
NSE4	YDL105W	HFI1	Q12060	488 aa		4.06	□□□□□ -1.76
NSE4	YDL105W	RMP1	Q12530	201 aa		4.06	□□□□□ -1.76
NSE4	YDL105W	RPS21B	Q3E754	87 aa	Known RBP	4.06	□□□□□ -1.76
NSE4	YDL105W	PSA1	P41940	361 aa	Known RBP	4.05	□□□□□ -1.76
NSE4	YDL105W	MEP2	P41948	499 aa		4.05	□□□□□ -1.76
NSE4	YDL105W	SPO1	P53541	631 aa		4.05	□□□□□ -1.76
NSE4	YDL105W	NOP15	P53927	220 aa	Predicted RBP	4.05	□□□□□ -1.76
NSE4	YDL105W	RCR2	Q03446	210 aa	Known RBP	4.05	□□□□□ -1.76
NSE4	YDL105W	CEF1	Q03654	590 aa	Predicted RBP	4.05	□□□□□ -1.76
NSE4	YDL105W	TRS23	Q03784	219 aa		4.05	□□□□□ -1.76
NSE4	YDL105W	TMA17	Q12513	150 aa		4.05	□□□□□ -1.76
NSE4	YDL105W	APM4	Q99186	491 aa		4.05	□□□□□ -1.76
NSE4	YDL105W	RPS17A	P02407	136 aa	Known RBP	4.04	□□□□□ -1.76
NSE4	YDL105W	RPS17B	P14127	136 aa	Known RBP	4.04	□□□□□ -1.76
NSE4	YDL105W	AEP2	P22136	580 aa		4.04	□□□□□ -1.76
NSE4	YDL105W	MRC1	P25588	1096 aa		4.04	□□□□□ -1.76
NSE4	YDL105W	EUG1	P32474	517 aa		4.04	□□□□□ -1.76
NSE4	YDL105W	DUN1	P39009	513 aa		4.04	□□□□□ -1.76
NSE4	YDL105W	PIP2	P52960	996 aa		4.04	□□□□□ -1.76
NSE4	YDL105W	ZPS1	Q12512	249 aa		4.04	□□□□□ -1.76
NSE4	YDL105W	RPS21A	P0C0V8	87 aa	Known RBP	4.03	□□□□□ -1.76
NSE4	YDL105W	PMA2	P19657	947 aa		4.03	□□□□□ -1.76
NSE4	YDL105W	IME1	P21190	360 aa		4.03	□□□□□ -1.76
NSE4	YDL105W	PAF1	P38351	445 aa		4.03	□□□□□ -1.76
NSE4	YDL105W	TMN3	P40071	706 aa		4.03	□□□□□ -1.76
NSE4	YDL105W	BUD8	P41698	603 aa		4.03	□□□□□ -1.76
NSE4	YDL105W	RNR4	P49723	345 aa	Known RBP	4.03	□□□□□ -1.76
NSE4	YDL105W	FDC1	Q03034	503 aa		4.03	□□□□□ -1.76
NSE4	YDL105W	YPS7	Q06325	596 aa		4.03	□□□□□ -1.76
NSE4	YDL105W	GEP3	Q08622	556 aa		4.03	□□□□□ -1.76
NSE4	YDL105W	YPR027C	Q12079	277 aa		4.03	□□□□□ -1.76
NSE4	YDL105W	GLN4	P13188	809 aa	Known RBP	4.02	□□□□□ -1.77
NSE4	YDL105W	YBR071W	P38243	211 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms