RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C RCR2Q03446 210 aaKnown RBP3.69□□□□□ -1.82
RPB5YBR154C YDL073WQ07454 984 aa3.69□□□□□ -1.82
RPB5YBR154C PMA2P19657 947 aa3.68□□□□□ -1.82
RPB5YBR154C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
RPB5YBR154C TDA3P38758 523 aa3.68□□□□□ -1.82
RPB5YBR154C PPE1P38796 400 aa3.68□□□□□ -1.82
RPB5YBR154C RET2P43621 546 aa3.68□□□□□ -1.82
RPB5YBR154C PIP2P52960 996 aa3.68□□□□□ -1.82
RPB5YBR154C ATP23P53722 227 aa3.68□□□□□ -1.82
RPB5YBR154C YNL193WP53870 558 aa3.68□□□□□ -1.82
RPB5YBR154C TFB2Q02939 513 aa3.68□□□□□ -1.82
RPB5YBR154C YLR001CQ07895 862 aa3.68□□□□□ -1.82
RPB5YBR154C YPL216WQ08964 1102 aa3.68□□□□□ -1.82
RPB5YBR154C HEM1P09950 548 aaPredicted RBP3.67□□□□□ -1.82
RPB5YBR154C IME1P21190 360 aa3.67□□□□□ -1.82
RPB5YBR154C YUR1P26725 428 aa3.67□□□□□ -1.82
RPB5YBR154C MRPL9P31334 269 aa3.67□□□□□ -1.82
RPB5YBR154C APD1P38281 316 aa3.67□□□□□ -1.82
RPB5YBR154C TMN3P40071 706 aa3.67□□□□□ -1.82
RPB5YBR154C BUD8P41698 603 aa3.67□□□□□ -1.82
RPB5YBR154C MFM1Q02783 413 aa3.67□□□□□ -1.82
RPB5YBR154C YMR084WA2P2R3 262 aa3.66□□□□□ -1.82
RPB5YBR154C CPA2P03965 1118 aaKnown RBP3.66□□□□□ -1.82
RPB5YBR154C RPL7AP05737 244 aaKnown RBP3.66□□□□□ -1.82
RPB5YBR154C TUP1P16649 713 aa3.66□□□□□ -1.82
RPB5YBR154C TSR4P25040 408 aa3.66□□□□□ -1.82
RPB5YBR154C SFP1P32432 683 aa3.66□□□□□ -1.82
RPB5YBR154C BEM3P32873 1128 aa3.66□□□□□ -1.82
RPB5YBR154C RPC34P32910 317 aa3.66□□□□□ -1.82
RPB5YBR154C DHR2P36009 735 aaPredicted RBP3.66□□□□□ -1.82
RPB5YBR154C MGS1P40151 587 aa3.66□□□□□ -1.82
RPB5YBR154C YIP4P53093 235 aa3.66□□□□□ -1.82
RPB5YBR154C SDA1P53313 767 aaKnown RBP3.66□□□□□ -1.82
RPB5YBR154C HLR1Q04429 423 aa3.66□□□□□ -1.82
RPB5YBR154C GFD1Q04839 188 aaKnown RBP3.66□□□□□ -1.82
RPB5YBR154C YPS7Q06325 596 aa3.66□□□□□ -1.82
RPB5YBR154C RPL7BQ12213 244 aaKnown RBP3.66□□□□□ -1.82
RPB5YBR154C LEU2P04173 364 aaPredicted RBP3.65□□□□□ -1.83
RPB5YBR154C SWI6P09959 803 aa3.65□□□□□ -1.83
RPB5YBR154C WHI2P12611 486 aa3.65□□□□□ -1.83
RPB5YBR154C LOT5P34234 306 aa3.65□□□□□ -1.83
RPB5YBR154C DUN1P39009 513 aa3.65□□□□□ -1.83
RPB5YBR154C STB2P46679 850 aa3.65□□□□□ -1.83
RPB5YBR154C TAF4P50105 388 aa3.65□□□□□ -1.83
RPB5YBR154C COQ6P53318 479 aa3.65□□□□□ -1.83
RPB5YBR154C ERG13P54839 491 aaKnown RBP3.65□□□□□ -1.83
RPB5YBR154C EFR3Q03653 782 aaKnown RBP3.65□□□□□ -1.83
RPB5YBR154C NSE5Q03718 556 aa3.65□□□□□ -1.83
RPB5YBR154C TGS1Q12052 315 aa3.65□□□□□ -1.83
RPB5YBR154C RPS17AP02407 136 aaKnown RBP3.64□□□□□ -1.83
RPB5YBR154C RPS17BP14127 136 aaKnown RBP3.64□□□□□ -1.83
RPB5YBR154C CNE1P27825 502 aa3.64□□□□□ -1.83
RPB5YBR154C PRE4P30657 266 aa3.64□□□□□ -1.83
RPB5YBR154C EUG1P32474 517 aa3.64□□□□□ -1.83
RPB5YBR154C CKB2P38930 258 aa3.64□□□□□ -1.83
RPB5YBR154C YEL025CP39991 1188 aa3.64□□□□□ -1.83
RPB5YBR154C SNO3P43544 222 aa3.64□□□□□ -1.83
RPB5YBR154C BPL1P48445 690 aaPredicted RBP3.64□□□□□ -1.83
RPB5YBR154C YGR054WP53235 642 aaKnown RBP3.64□□□□□ -1.83
RPB5YBR154C NOP15P53927 220 aaPredicted RBP3.64□□□□□ -1.83
RPB5YBR154C YPL068CQ02749 293 aa3.64□□□□□ -1.83
RPB5YBR154C FPR4Q06205 392 aaPredicted RBP3.64□□□□□ -1.83
RPB5YBR154C STP4Q07351 490 aa3.64□□□□□ -1.83
RPB5YBR154C MRPL7P36519 292 aa3.63□□□□□ -1.83
RPB5YBR154C NMD5P46970 1048 aa3.63□□□□□ -1.83
RPB5YBR154C BUD17P53727 317 aa3.63□□□□□ -1.83
RPB5YBR154C YNL018CP53976 612 aa3.63□□□□□ -1.83
RPB5YBR154C GEP3Q08622 556 aa3.63□□□□□ -1.83
RPB5YBR154C AIM41Q12032 185 aa3.63□□□□□ -1.83
RPB5YBR154C CRG1P38892 291 aaRIP-Chip data3.62□□□□□ -1.83not detected
RPB5YBR154C FTR1P40088 404 aa3.62□□□□□ -1.83
RPB5YBR154C YJL043WP47053 257 aa3.62□□□□□ -1.83
RPB5YBR154C CIR2Q08822 631 aa3.62□□□□□ -1.83
RPB5YBR154C CAP1P28495 268 aaKnown RBP3.61□□□□□ -1.83
RPB5YBR154C SPC97P38863 823 aa3.61□□□□□ -1.83
RPB5YBR154C OPT1P40897 799 aa3.61□□□□□ -1.83
RPB5YBR154C YGR153WP48238 217 aa3.61□□□□□ -1.83
RPB5YBR154C TIM50Q02776 476 aa3.61□□□□□ -1.83
RPB5YBR154C NOP14Q99207 810 aaKnown RBP3.61□□□□□ -1.83
RPB5YBR154C HOP1P20050 605 aa3.6□□□□□ -1.83
RPB5YBR154C SEC65P29478 273 aa3.6□□□□□ -1.83
RPB5YBR154C ECM32P32644 1121 aaKnown RBP3.6□□□□□ -1.83
RPB5YBR154C RRP14P36080 434 aaKnown RBP3.6□□□□□ -1.83
RPB5YBR154C BRN1P38170 754 aa3.6□□□□□ -1.83
RPB5YBR154C PRM2P40534 656 aa3.6□□□□□ -1.83
RPB5YBR154C IES1P43579 692 aa3.6□□□□□ -1.83
RPB5YBR154C FRE7Q12333 620 aa3.6□□□□□ -1.83
RPB5YBR154C AQY1P0CD91 305 aa3.59□□□□□ -1.83
RPB5YBR154C RPL8AP17076 256 aaKnown RBP3.59□□□□□ -1.83
RPB5YBR154C PRP19P32523 503 aaKnown RBP3.59□□□□□ -1.83
RPB5YBR154C JHD1P40034 492 aa3.59□□□□□ -1.83
RPB5YBR154C MNT3P40549 630 aa3.59□□□□□ -1.83
RPB5YBR154C YJR096WP47137 282 aa3.59□□□□□ -1.83
RPB5YBR154C ENP2P48234 707 aaKnown RBP3.59□□□□□ -1.83
RPB5YBR154C TDA9Q04545 1251 aa3.59□□□□□ -1.83
RPB5YBR154C YTA7P40340 1379 aa3.59□□□□□ -1.83
RPB5YBR154C TUF1P02992 437 aaKnown RBP3.58□□□□□ -1.84
RPB5YBR154C RNR3P21672 869 aaKnown RBP3.58□□□□□ -1.84
RPB5YBR154C URE2P23202 354 aaKnown RBP3.58□□□□□ -1.84
RPB5YBR154C GSY2P27472 705 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms