RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TCIRG1Q13488 830 aa16.07■□□□□ 0.16
PHGDH-233ENST00000642021 OSBPL5Q9H0X9 879 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-233ENST00000642021 IFNKQ9P0W0 207 aa16.07■□□□□ 0.16
PHGDH-233ENST00000642021 ERVV-2B6SEH9 535 aa16.07■□□□□ 0.16
PHGDH-233ENST00000642021 ZNF213O14771 459 aa16.07■□□□□ 0.16
PHGDH-233ENST00000642021 ZFYP08048 801 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-233ENST00000642021 RXRAP19793 462 aa16.07■□□□□ 0.16
PHGDH-233ENST00000642021 NCAPHQ15003 741 aa16.07■□□□□ 0.16
PHGDH-233ENST00000642021 ANO1Q5XXA6 986 aa16.07■□□□□ 0.16
PHGDH-233ENST00000642021 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-233ENST00000642021 ADAMTSL3P82987 1691 aa16.07■□□□□ 0.16
PHGDH-233ENST00000642021 SLC3A2P08195 630 aaKnown RBP16.06■□□□□ 0.16
PHGDH-233ENST00000642021 PFKFB1P16118 471 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 ARMCX5Q6P1M9 558 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 TOM1L2Q6ZVM7 507 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 IPO4Q8TEX9 1081 aaKnown RBP16.06■□□□□ 0.16
PHGDH-233ENST00000642021 CHMP4CQ96CF2 233 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 SENP2Q9HC62 589 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 AKAP2Q9Y2D5 859 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 SPATA31A3Q5VYP0 1347 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 DHX16O60231 1041 aaKnown RBP16.06■□□□□ 0.16
PHGDH-233ENST00000642021 SMC2O95347 1197 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 E4F1Q66K89 784 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-233ENST00000642021 SYNE3Q6ZMZ3 975 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 RALYLQ86SE5 291 aaKnown RBP16.06■□□□□ 0.16
PHGDH-233ENST00000642021 MROH7-TTC4A0A0A0MT08 1334 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 PCDH11XQ9BZA7 1347 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 PCDH11YQ9BZA8 1340 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 KCPQ6ZWJ8 1503 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 LAMB4A4D0S4 1761 aa16.06■□□□□ 0.16
PHGDH-233ENST00000642021 IGSF3O75054 1194 aa16.05■□□□□ 0.16
PHGDH-233ENST00000642021 BRD2P25440 801 aaKnown RBP16.05■□□□□ 0.16
PHGDH-233ENST00000642021 MCAMP43121 646 aa16.05■□□□□ 0.16
PHGDH-233ENST00000642021 TMC6Q7Z403 805 aa16.05■□□□□ 0.16
PHGDH-233ENST00000642021 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
PHGDH-233ENST00000642021 TNS3Q68CZ2 1445 aa16.05■□□□□ 0.16
PHGDH-233ENST00000642021 NUP188Q5SRE5 1749 aa16.05■□□□□ 0.16
PHGDH-233ENST00000642021 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
PHGDH-233ENST00000642021 CYB5R4Q7L1T6 521 aa16.05■□□□□ 0.16
PHGDH-233ENST00000642021 BPIFA3Q9BQP9 254 aa16.05■□□□□ 0.16
PHGDH-233ENST00000642021 PLEKHG2Q9H7P9 1386 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 CMA1P23946 247 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 LRRFIP1Q32MZ4 808 aaKnown RBP16.04■□□□□ 0.16
PHGDH-233ENST00000642021 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 FEZ1Q99689 392 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 HSD3B7Q9H2F3 369 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 CSF1RP07333 972 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 GSDMDP57764 484 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 NLRP12P59046 1061 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
PHGDH-233ENST00000642021 CPDO75976 1380 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 UBE2Q2LH0YL09 131 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 ATP1A3P13637 1013 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 LMOD1P29536 600 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-233ENST00000642021 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
PHGDH-233ENST00000642021 SLC39A14Q15043 492 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 INCENPQ9NQS7 918 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 KCND1Q9NSA2 647 aa16.04■□□□□ 0.16
PHGDH-233ENST00000642021 WDR17Q8IZU2 1322 aa16.03■□□□□ 0.16
PHGDH-233ENST00000642021 CDC27P30260 824 aa16.03■□□□□ 0.16
PHGDH-233ENST00000642021 NKX1-1Q15270 411 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-233ENST00000642021 PHKBQ93100 1093 aa16.03■□□□□ 0.16
PHGDH-233ENST00000642021 IMPACTQ9P2X3 320 aa16.03■□□□□ 0.16
PHGDH-233ENST00000642021 RIPOR2Q9Y4F9 1068 aa16.03■□□□□ 0.16
PHGDH-233ENST00000642021 SLC9C2Q5TAH2 1124 aa16.03■□□□□ 0.16
PHGDH-233ENST00000642021 ALG1Q9BT22 464 aa16.03■□□□□ 0.16
PHGDH-233ENST00000642021 OGFRQ9NZT2 677 aa16.03■□□□□ 0.16
PHGDH-233ENST00000642021 CGNQ9P2M7 1197 aaKnown RBP16.03■□□□□ 0.16
PHGDH-233ENST00000642021 PCCAP05165 728 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-233ENST00000642021 KMT5BQ4FZB7 885 aa16.02■□□□□ 0.16
PHGDH-233ENST00000642021 SHC4Q6S5L8 630 aa16.02■□□□□ 0.16
PHGDH-233ENST00000642021 VPS37DQ86XT2 251 aa16.02■□□□□ 0.16
PHGDH-233ENST00000642021 PRDM11Q9NQV5 511 aa16.02■□□□□ 0.16
PHGDH-233ENST00000642021 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.16
PHGDH-233ENST00000642021 FBXO3Q9UK99 471 aa16.02■□□□□ 0.16
PHGDH-233ENST00000642021 SPEF2Q9C093 1822 aa16.02■□□□□ 0.16
PHGDH-233ENST00000642021 ADD2P35612 726 aa16.02■□□□□ 0.15
PHGDH-233ENST00000642021 TRIM28Q13263 835 aaKnown RBP16.02■□□□□ 0.15
PHGDH-233ENST00000642021 METTL24Q5JXM2 366 aa16.02■□□□□ 0.15
PHGDH-233ENST00000642021 KIF18AQ8NI77 898 aa16.02■□□□□ 0.15
PHGDH-233ENST00000642021 CLIC6Q96NY7 704 aa16.02■□□□□ 0.15
PHGDH-233ENST00000642021 PIH1D3Q9NQM4 214 aaKnown RBP16.02■□□□□ 0.15
PHGDH-233ENST00000642021 ANGEL1Q9UNK9 670 aaKnown RBP16.02■□□□□ 0.15
PHGDH-233ENST00000642021 KRT40Q6A162 431 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 LDHAL6AQ6ZMR3 332 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 DNAJC10Q8IXB1 793 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 ZBTB38Q8NAP3 1195 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-233ENST00000642021 DPF2Q92785 391 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 PPP1R13BQ96KQ4 1090 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 GREM2Q9H772 168 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 GPTP24298 496 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 METAP2P50579 478 aaKnown RBP eCLIP16.01■□□□□ 0.151e-6■■□□□ 12.1
PHGDH-233ENST00000642021 FANCCQ00597 558 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 PTPAQ15257 358 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 HLFQ16534 295 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 PTPN21Q16825 1174 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 MYL10Q9BUA6 226 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 PLA2G12BQ9BX93 195 aa16.01■□□□□ 0.15
PHGDH-233ENST00000642021 GTPBP4Q9BZE4 634 aaKnown RBP16.01■□□□□ 0.15
PHGDH-233ENST00000642021 RIC1Q4ADV7 1423 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms