RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 RIC3Q7Z5B4 369 aa9.41□□□□□ -0.9
PHGDH-225ENST00000641720 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.41□□□□□ -0.9
PHGDH-225ENST00000641720 SSH1Q8WYL5 1049 aa9.41□□□□□ -0.9
PHGDH-225ENST00000641720 CDC5LQ99459 802 aaKnown RBP9.41□□□□□ -0.9
PHGDH-225ENST00000641720 MYH2Q9UKX2 1941 aa9.41□□□□□ -0.9
PHGDH-225ENST00000641720 CDK5RAP2Q96SN8 1893 aa9.4□□□□□ -0.9
PHGDH-225ENST00000641720 MAST2Q6P0Q8 1798 aa9.4□□□□□ -0.9
PHGDH-225ENST00000641720 CLRN2A0PK11 232 aa9.4□□□□□ -0.9
PHGDH-225ENST00000641720 NEURL1BA8MQ27 555 aa9.4□□□□□ -0.9
PHGDH-225ENST00000641720 MTFR1Q15390 333 aa9.4□□□□□ -0.9
PHGDH-225ENST00000641720 CWF19L2Q2TBE0 894 aaKnown RBP9.4□□□□□ -0.9
PHGDH-225ENST00000641720 CFAP100Q494V2 611 aa9.4□□□□□ -0.9
PHGDH-225ENST00000641720 SPDYE2Q495Y8 402 aa9.4□□□□□ -0.9
PHGDH-225ENST00000641720 ANKRD13AQ8IZ07 590 aa9.4□□□□□ -0.9
PHGDH-225ENST00000641720 SH3TC2Q8TF17 1288 aa9.4□□□□□ -0.9
PHGDH-225ENST00000641720 OPTNQ96CV9 577 aa9.4□□□□□ -0.9
PHGDH-225ENST00000641720 STK31Q9BXU1 1019 aa9.4□□□□□ -0.9
PHGDH-225ENST00000641720 LTBP2Q14767 1821 aa9.4□□□□□ -0.91
PHGDH-225ENST00000641720 SLC4A2P04920 1241 aa9.39□□□□□ -0.91
PHGDH-225ENST00000641720 HSP90B1P14625 803 aaKnown RBP9.39□□□□□ -0.91
PHGDH-225ENST00000641720 RARSP54136 660 aaKnown RBP9.39□□□□□ -0.91
PHGDH-225ENST00000641720 CHRNDQ07001 517 aa9.39□□□□□ -0.91
PHGDH-225ENST00000641720 VGLL4Q14135 290 aa9.39□□□□□ -0.91
PHGDH-225ENST00000641720 RASA3Q14644 834 aa9.39□□□□□ -0.91
PHGDH-225ENST00000641720 DLGAP5Q15398 846 aa9.39□□□□□ -0.91
PHGDH-225ENST00000641720 SLC9C1Q4G0N8 1177 aa9.39□□□□□ -0.91
PHGDH-225ENST00000641720 MRPL50Q8N5N7 158 aaKnown RBP9.39□□□□□ -0.91
PHGDH-225ENST00000641720 ELP3Q9H9T3 547 aa9.39□□□□□ -0.91
PHGDH-225ENST00000641720 SMC4Q9NTJ3 1288 aa9.39□□□□□ -0.91
PHGDH-225ENST00000641720 MAP3K2Q9Y2U5 619 aa9.39□□□□□ -0.91
PHGDH-225ENST00000641720 SNCAIPQ9Y6H5 919 aa9.39□□□□□ -0.91
PHGDH-225ENST00000641720 SIPA1L1O43166 1804 aa9.38□□□□□ -0.91
PHGDH-225ENST00000641720 FAM205AQ6ZU69 1335 aa9.38□□□□□ -0.91
PHGDH-225ENST00000641720 DLL1O00548 723 aa9.38□□□□□ -0.91
PHGDH-225ENST00000641720 PPP1R12BO60237 982 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-225ENST00000641720 TLR2O60603 784 aa9.38□□□□□ -0.91
PHGDH-225ENST00000641720 CT47B1P0C2W7 299 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-225ENST00000641720 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-225ENST00000641720 LACTBP83111 547 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-225ENST00000641720 FLIIQ13045 1269 aa9.38□□□□□ -0.91
PHGDH-225ENST00000641720 MOGSQ13724 837 aa9.38□□□□□ -0.91
PHGDH-225ENST00000641720 GRIK5Q16478 980 aa9.38□□□□□ -0.91
PHGDH-225ENST00000641720 TMEM106CQ9BVX2 250 aa9.38□□□□□ -0.91
PHGDH-225ENST00000641720 NCOR1O75376 2440 aa9.38□□□□□ -0.91
PHGDH-225ENST00000641720 COL2A1P02458 1487 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-225ENST00000641720 CCL15-CCL14A0A0B4J2E2 113 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 PI4KAP2A4QPH2 592 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 SPDYE5A6NIY4 337 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 ZBTB7BO15156 539 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-225ENST00000641720 ITGA6P23229 1130 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 IREB2P48200 963 aaKnown RBP9.37□□□□□ -0.91
PHGDH-225ENST00000641720 TAF1CQ15572 869 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-225ENST00000641720 CCL15Q16663 113 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 ALDH1L2Q3SY69 923 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 SUPT20HL1Q3ZLR7 823 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 C17orf99Q6UX52 265 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 KSR2Q6VAB6 950 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 UBE3BQ7Z3V4 1068 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 PI4KAP1Q8N8J0 262 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 FBXW7Q969H0 707 aa9.37□□□□□ -0.91
PHGDH-225ENST00000641720 ZCCHC17Q9NP64 241 aaKnown RBP9.37□□□□□ -0.91
PHGDH-225ENST00000641720 ZNF70Q9UC06 446 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-225ENST00000641720 BTBD19C9JJ37 291 aa9.36□□□□□ -0.91
PHGDH-225ENST00000641720 F6X3S4 739 aa9.36□□□□□ -0.91
PHGDH-225ENST00000641720 BCAR3O75815 825 aa9.36□□□□□ -0.91
PHGDH-225ENST00000641720 GJA8P48165 433 aa9.36□□□□□ -0.91
PHGDH-225ENST00000641720 FKBP5Q13451 457 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-225ENST00000641720 LRCH3Q96II8 777 aa9.36□□□□□ -0.91
PHGDH-225ENST00000641720 TRIM47Q96LD4 638 aa9.36□□□□□ -0.91
PHGDH-225ENST00000641720 CHMP4AQ9BY43 222 aa9.36□□□□□ -0.91
PHGDH-225ENST00000641720 ANKRD2Q9GZV1 360 aa9.36□□□□□ -0.91
PHGDH-225ENST00000641720 RPAP1Q9BWH6 1393 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-225ENST00000641720 REV3LO60673 3130 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 TAF5LO75529 589 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 FOXO4P98177 505 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 GCKRQ14397 625 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 OTUD7BQ6GQQ9 843 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 NBPF11Q86T75 865 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 HELBQ8NG08 1087 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-225ENST00000641720 TDRD7Q8NHU6 1098 aaKnown RBP9.35□□□□□ -0.91
PHGDH-225ENST00000641720 TMEM39BQ9GZU3 492 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 VEZTQ9HBM0 779 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 ZFYVE28Q9HCC9 887 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 TNNQ9UQP3 1299 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 JAG2Q9Y219 1238 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 FOCADQ5VW36 1801 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 RLFQ13129 1914 aa9.35□□□□□ -0.91
PHGDH-225ENST00000641720 A0A1W2PPC1 479 aa9.34□□□□□ -0.91
PHGDH-225ENST00000641720 F8W031 263 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-225ENST00000641720 IRF6O14896 467 aa9.34□□□□□ -0.91
PHGDH-225ENST00000641720 DDX58O95786 925 aaKnown RBP9.34□□□□□ -0.91
PHGDH-225ENST00000641720 MYCP01106 439 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-225ENST00000641720 GJB1P08034 283 aa9.34□□□□□ -0.91
PHGDH-225ENST00000641720 OSBPP22059 807 aa9.34□□□□□ -0.91
PHGDH-225ENST00000641720 IGHMBP2P38935 993 aaKnown RBP9.34□□□□□ -0.91
PHGDH-225ENST00000641720 GTF2A2P52657 109 aa9.34□□□□□ -0.91
PHGDH-225ENST00000641720 PRMT2P55345 433 aa9.34□□□□□ -0.91
PHGDH-225ENST00000641720 MAP3K9P80192 1104 aa9.34□□□□□ -0.91
PHGDH-225ENST00000641720 SLC4A8Q2Y0W8 1093 aa9.34□□□□□ -0.91
PHGDH-225ENST00000641720 EPHA10Q5JZY3 1008 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms