RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 DPCR1Q3MIW9 517 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 PRIMPOLQ96LW4 560 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 SDF4Q9BRK5 362 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 ZNF532Q9HCE3 1301 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 VGLL2Q8N8G2 317 aa19.63■□□□□ 0.73
PHGDH-223ENST00000641597 UBN2Q6ZU65 1347 aa19.63■□□□□ 0.73
PHGDH-223ENST00000641597 STARD3NLO95772 234 aa19.63■□□□□ 0.73
PHGDH-223ENST00000641597 ADD2P35612 726 aa19.63■□□□□ 0.73
PHGDH-223ENST00000641597 SF3A1Q15459 793 aaKnown RBP19.63■□□□□ 0.73
PHGDH-223ENST00000641597 MICU3Q86XE3 530 aa19.63■□□□□ 0.73
PHGDH-223ENST00000641597 MRPS27Q92552 414 aaKnown RBP19.63■□□□□ 0.73
PHGDH-223ENST00000641597 KIF3AQ9Y496 699 aa19.63■□□□□ 0.73
PHGDH-223ENST00000641597 NEDD4P46934 1319 aa19.63■□□□□ 0.73
PHGDH-223ENST00000641597 PLEKHG2Q9H7P9 1386 aa19.62■□□□□ 0.73
PHGDH-223ENST00000641597 ZFYP08048 801 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-223ENST00000641597 CDC27P30260 824 aa19.62■□□□□ 0.73
PHGDH-223ENST00000641597 CCDC102BQ68D86 513 aa19.62■□□□□ 0.73
PHGDH-223ENST00000641597 BCL2L12Q9HB09 334 aa19.62■□□□□ 0.73
PHGDH-223ENST00000641597 RTEL1Q9NZ71 1219 aa19.62■□□□□ 0.73
PHGDH-223ENST00000641597 TACC3Q9Y6A5 838 aa19.62■□□□□ 0.73
PHGDH-223ENST00000641597 BECN2A8MW95 431 aa19.62■□□□□ 0.73
PHGDH-223ENST00000641597 CYP19A1P11511 503 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-223ENST00000641597 MYSM1Q5VVJ2 828 aa19.62■□□□□ 0.73
PHGDH-223ENST00000641597 PLA2G12BQ9BX93 195 aa19.62■□□□□ 0.73
PHGDH-223ENST00000641597 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.62■□□□□ 0.73
PHGDH-223ENST00000641597 ANKRD18BA2A2Z9 1011 aa19.61■□□□□ 0.73
PHGDH-223ENST00000641597 NAA30Q147X3 362 aaPredicted RBP19.61■□□□□ 0.73
PHGDH-223ENST00000641597 MROH7-TTC4A0A0A0MT08 1334 aa19.61■□□□□ 0.73
PHGDH-223ENST00000641597 WDHD1O75717 1129 aaPredicted RBP19.61■□□□□ 0.73
PHGDH-223ENST00000641597 SPEF2Q9C093 1822 aa19.6■□□□□ 0.73
PHGDH-223ENST00000641597 CTDSPL2Q05D32 466 aa19.6■□□□□ 0.73
PHGDH-223ENST00000641597 KLHL34Q8N239 644 aa19.6■□□□□ 0.73
PHGDH-223ENST00000641597 PDE8BO95263 885 aa19.6■□□□□ 0.73
PHGDH-223ENST00000641597 TPM3P06753 285 aa19.6■□□□□ 0.73
PHGDH-223ENST00000641597 PDE6AP16499 860 aa19.6■□□□□ 0.73
PHGDH-223ENST00000641597 KIF23Q02241 960 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-223ENST00000641597 ADALQ6DHV7 355 aa19.6■□□□□ 0.73
PHGDH-223ENST00000641597 SEC31BQ9NQW1 1179 aa19.6■□□□□ 0.73
PHGDH-223ENST00000641597 SPTLC2O15270 562 aa19.59■□□□□ 0.73
PHGDH-223ENST00000641597 MYH7P12883 1935 aa19.59■□□□□ 0.73
PHGDH-223ENST00000641597 SMIM22K7EJ46 135 aa19.59■□□□□ 0.73
PHGDH-223ENST00000641597 PRKAB2O43741 272 aa19.59■□□□□ 0.73
PHGDH-223ENST00000641597 PTPN21Q16825 1174 aa19.59■□□□□ 0.73
PHGDH-223ENST00000641597 WTIPA6NIX2 430 aaPredicted RBP19.58■□□□□ 0.73
PHGDH-223ENST00000641597 GTF2F1P35269 517 aaKnown RBP eCLIP19.58■□□□□ 0.73
PHGDH-223ENST00000641597 GLIPR1L2Q4G1C9 344 aa19.58■□□□□ 0.73
PHGDH-223ENST00000641597 LRRC8AQ8IWT6 810 aa19.58■□□□□ 0.73
PHGDH-223ENST00000641597 CMTR1Q8N1G2 835 aaKnown RBP19.58■□□□□ 0.73
PHGDH-223ENST00000641597 FBXL16Q8N461 479 aa19.58■□□□□ 0.73
PHGDH-223ENST00000641597 ZKSCAN3Q9BRR0 538 aa19.58■□□□□ 0.73
PHGDH-223ENST00000641597 AXDND1Q5T1B0 1012 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-223ENST00000641597 CCDC82Q8N4S0 544 aa19.58■□□□□ 0.72
PHGDH-223ENST00000641597 ZNF592Q92610 1267 aa19.58■□□□□ 0.72
PHGDH-223ENST00000641597 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.58■□□□□ 0.721e-14■□□□□ 11
PHGDH-223ENST00000641597 EPB41L4AQ9HCS5 686 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-223ENST00000641597 TRMT1Q9NXH9 659 aaKnown RBP19.58■□□□□ 0.72
PHGDH-223ENST00000641597 IQSEC3Q9UPP2 1182 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-223ENST00000641597 SLIT2O94813 1529 aa19.58■□□□□ 0.72
PHGDH-223ENST00000641597 ABCA3Q99758 1704 aa19.58■□□□□ 0.72
PHGDH-223ENST00000641597 CTAGE5O15320 804 aa19.57■□□□□ 0.72
PHGDH-223ENST00000641597 LRRFIP1Q32MZ4 808 aaKnown RBP19.57■□□□□ 0.72
PHGDH-223ENST00000641597 DZIP3Q86Y13 1208 aaKnown RBP19.57■□□□□ 0.72
PHGDH-223ENST00000641597 CLIC6Q96NY7 704 aa19.57■□□□□ 0.72
PHGDH-223ENST00000641597 ALG1Q9BT22 464 aa19.57■□□□□ 0.72
PHGDH-223ENST00000641597 ANGEL1Q9UNK9 670 aaKnown RBP19.57■□□□□ 0.72
PHGDH-223ENST00000641597 ITGB4P16144 1822 aa19.57■□□□□ 0.72
PHGDH-223ENST00000641597 RANBP6O60518 1105 aaKnown RBP19.57■□□□□ 0.72
PHGDH-223ENST00000641597 METAP2P50579 478 aaKnown RBP eCLIP19.57■□□□□ 0.721e-6■■□□□ 12.1
PHGDH-223ENST00000641597 ANO1Q5XXA6 986 aa19.57■□□□□ 0.72
PHGDH-223ENST00000641597 APOA5Q6Q788 366 aa19.57■□□□□ 0.72
PHGDH-223ENST00000641597 ARMT1Q9H993 441 aa19.57■□□□□ 0.72
PHGDH-223ENST00000641597 ANO10Q9NW15 660 aa19.57■□□□□ 0.72
PHGDH-223ENST00000641597 TCRBV5S4A2TA0A5A2 114 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 ZNF202O95125 648 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 TNNT1P13805 278 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 PFKFB1P16118 471 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 TRDNQ13061 729 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 RASGRF1Q13972 1273 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-223ENST00000641597 MAGEB6Q8N7X4 407 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 ZMYND15Q9H091 742 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 PRDM10Q9NQV6 1147 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 FBXO3Q9UK99 471 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 SH2B2O14492 632 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-223ENST00000641597 SYNE3Q6ZMZ3 975 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 NBPF11Q86T75 865 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 VPS37DQ86XT2 251 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 CEP57L1Q8IYX8 460 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 POLR3EQ9NVU0 708 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 KIAA1468Q9P260 1216 aa19.56■□□□□ 0.72
PHGDH-223ENST00000641597 CDHR2Q9BYE9 1310 aa19.55■□□□□ 0.72
PHGDH-223ENST00000641597 CCDC69A6NI79 296 aa19.55■□□□□ 0.72
PHGDH-223ENST00000641597 DHX16O60231 1041 aaKnown RBP19.55■□□□□ 0.72
PHGDH-223ENST00000641597 MBD4O95243 580 aa19.55■□□□□ 0.72
PHGDH-223ENST00000641597 TPD52L1Q16890 204 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-223ENST00000641597 SPECC1Q5M775 1068 aa19.55■□□□□ 0.72
PHGDH-223ENST00000641597 KRT40Q6A162 431 aa19.55■□□□□ 0.72
PHGDH-223ENST00000641597 SARM1Q6SZW1 724 aa19.55■□□□□ 0.72
PHGDH-223ENST00000641597 STRBPQ96SI9 672 aaKnown RBP19.55■□□□□ 0.72
PHGDH-223ENST00000641597 GUCY1A2P33402 732 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms