RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ATP6V0A2Q9Y487 856 aa10.53□□□□□ -0.72
PHGDH-219ENST00000641513 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
PHGDH-219ENST00000641513 TCRBV5S4A2TA0A5A2 114 aa10.52□□□□□ -0.73
PHGDH-219ENST00000641513 G3V3G9 751 aa10.52□□□□□ -0.73
PHGDH-219ENST00000641513 RIMBP2O15034 1052 aa10.52□□□□□ -0.73
PHGDH-219ENST00000641513 CYP21A2P08686 494 aa10.52□□□□□ -0.73
PHGDH-219ENST00000641513 NUCB2P80303 420 aa10.52□□□□□ -0.73
PHGDH-219ENST00000641513 C1QBPQ07021 282 aaKnown RBP10.52□□□□□ -0.73
PHGDH-219ENST00000641513 IMMTQ16891 758 aaKnown RBP10.52□□□□□ -0.73
PHGDH-219ENST00000641513 DCAF8Q5TAQ9 597 aa10.52□□□□□ -0.73
PHGDH-219ENST00000641513 NAA16Q6N069 864 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-219ENST00000641513 MIGA1Q8NAN2 632 aa10.52□□□□□ -0.73
PHGDH-219ENST00000641513 TBC1D16Q8TBP0 767 aa10.52□□□□□ -0.73
PHGDH-219ENST00000641513 LARP6Q9BRS8 491 aaKnown RBP10.52□□□□□ -0.73
PHGDH-219ENST00000641513 ARMT1Q9H993 441 aa10.52□□□□□ -0.73
PHGDH-219ENST00000641513 ZSWIM6Q9HCJ5 1215 aa10.52□□□□□ -0.73
PHGDH-219ENST00000641513 ZNF219Q9P2Y4 722 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-219ENST00000641513 LAMB1P07942 1786 aa10.52□□□□□ -0.73
PHGDH-219ENST00000641513 RPAP1Q9BWH6 1393 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-219ENST00000641513 NAV1Q8NEY1 1877 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 MAGEB6P1A0A0J9YX57 407 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 GOLGA6L22H0YM25 854 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 TRAK2O60296 914 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 CHRNA5P30532 468 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 AK2P54819 239 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 HAND2P61296 217 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 FGD1P98174 961 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 SPTY2D1Q68D10 685 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-219ENST00000641513 TTLL5Q6EMB2 1281 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 STYK1Q6J9G0 422 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 DPP8Q6V1X1 898 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-219ENST00000641513 DZIP1Q86YF9 867 aaKnown RBP10.51□□□□□ -0.73
PHGDH-219ENST00000641513 MPNDQ8N594 471 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 ZGPATQ8N5A5 531 aaKnown RBP10.51□□□□□ -0.73
PHGDH-219ENST00000641513 FBXW7Q969H0 707 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 TMX3Q96JJ7 454 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 NEK1Q96PY6 1258 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 POLLQ9UGP5 575 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 TAF6LQ9Y6J9 622 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 SLC4A4Q9Y6R1 1079 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 PDS5AQ29RF7 1337 aaKnown RBP10.51□□□□□ -0.73
PHGDH-219ENST00000641513 DUOX1Q9NRD9 1551 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
PHGDH-219ENST00000641513 ZNF213O14771 459 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 FGAP02671 866 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 KCNA4P22459 653 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 RPS6KB1P23443 525 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 TSGA10IPQ3SY00 556 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 OLFM4Q6UX06 510 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 C15orf52Q6ZUT6 534 aaKnown RBP10.5□□□□□ -0.73
PHGDH-219ENST00000641513 LCORLQ8N3X6 602 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 TDRD7Q8NHU6 1098 aaKnown RBP10.5□□□□□ -0.73
PHGDH-219ENST00000641513 WDR66Q8TBY9 1149 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 TNPO1Q92973 898 aaKnown RBP10.5□□□□□ -0.73
PHGDH-219ENST00000641513 CNKSR1Q969H4 720 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 TCEANC2Q96MN5 208 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 TTC14Q96N46 770 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 STRBPQ96SI9 672 aaKnown RBP10.5□□□□□ -0.73
PHGDH-219ENST00000641513 NAPBQ9H115 298 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 CD209Q9NNX6 404 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 PODXL2Q9NZ53 605 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 LIMCH1Q9UPQ0 1083 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 IRS2Q9Y4H2 1338 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 MYH1P12882 1939 aa10.5□□□□□ -0.73
PHGDH-219ENST00000641513 MYH8P13535 1937 aa10.49□□□□□ -0.73
PHGDH-219ENST00000641513 A0A0G2JLW4 131 aa10.49□□□□□ -0.73
PHGDH-219ENST00000641513 GOLGA6L3A6NEY3 463 aa10.49□□□□□ -0.73
PHGDH-219ENST00000641513 PATL2C9JE40 543 aaKnown RBP10.49□□□□□ -0.73
PHGDH-219ENST00000641513 E7EWF7 191 aa10.49□□□□□ -0.73
PHGDH-219ENST00000641513 LDHBP07195 334 aaKnown RBP10.49□□□□□ -0.73
PHGDH-219ENST00000641513 HMGB1P09429 215 aaKnown RBP10.49□□□□□ -0.73
PHGDH-219ENST00000641513 GNAT2P19087 354 aa10.49□□□□□ -0.73
PHGDH-219ENST00000641513 TDO2P48775 406 aa10.49□□□□□ -0.73
PHGDH-219ENST00000641513 MRE11P49959 708 aa10.49□□□□□ -0.73
PHGDH-219ENST00000641513 ANKRD1Q15327 319 aa10.49□□□□□ -0.73
PHGDH-219ENST00000641513 SLC16A10Q8TF71 515 aa10.49□□□□□ -0.73
PHGDH-219ENST00000641513 NACAP1Q9BZK3 213 aa10.49□□□□□ -0.73
PHGDH-219ENST00000641513 ZC3H12CQ9C0D7 883 aaKnown RBP10.49□□□□□ -0.73
PHGDH-219ENST00000641513 ECM29Q5VYK3 1845 aa10.49□□□□□ -0.73
PHGDH-219ENST00000641513 ZBTB7AO95365 584 aa10.48□□□□□ -0.73
PHGDH-219ENST00000641513 DYNLL1P63167 89 aaKnown RBP10.48□□□□□ -0.73
PHGDH-219ENST00000641513 MECOMQ03112 1051 aa10.48□□□□□ -0.73
PHGDH-219ENST00000641513 Q6ZUG5 572 aa10.48□□□□□ -0.73
PHGDH-219ENST00000641513 STOX1Q6ZVD7 989 aa10.48□□□□□ -0.73
PHGDH-219ENST00000641513 RALYLQ86SE5 291 aaKnown RBP10.48□□□□□ -0.73
PHGDH-219ENST00000641513 ADGRA1Q86SQ6 560 aa10.48□□□□□ -0.73
PHGDH-219ENST00000641513 FAM43AQ8N2R8 423 aa10.48□□□□□ -0.73
PHGDH-219ENST00000641513 UPF1Q92900 1129 aaKnown RBP eCLIP10.48□□□□□ -0.73
PHGDH-219ENST00000641513 NSUN4Q96CB9 384 aaKnown RBP10.48□□□□□ -0.73
PHGDH-219ENST00000641513 ZSCAN31Q96LW9 406 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-219ENST00000641513 EYA3Q99504 573 aa10.48□□□□□ -0.73
PHGDH-219ENST00000641513 NOL10Q9BSC4 688 aaKnown RBP10.48□□□□□ -0.73
PHGDH-219ENST00000641513 ATF5Q9Y2D1 282 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-219ENST00000641513 FOCADQ5VW36 1801 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 FOXP2O15409 715 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 PRKAB2O43741 272 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 IL1R1P14778 569 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 POLD1P28340 1107 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 PRDX5P30044 214 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 GSTO1P78417 241 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms