RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 FBXL16Q8N461 479 aa19.46■□□□□ 0.71
PHGDH-216ENST00000641375 NCOA7Q8NI08 942 aa19.46■□□□□ 0.71
PHGDH-216ENST00000641375 AGXT2Q9BYV1 514 aa19.46■□□□□ 0.71
PHGDH-216ENST00000641375 PARP3Q9Y6F1 533 aa19.46■□□□□ 0.71
PHGDH-216ENST00000641375 CCDC88AQ3V6T2 1871 aa19.46■□□□□ 0.71
PHGDH-216ENST00000641375 PDIA4P13667 645 aaKnown RBP19.46■□□□□ 0.71
PHGDH-216ENST00000641375 NACAP1Q9BZK3 213 aa19.46■□□□□ 0.71
PHGDH-216ENST00000641375 ARMT1Q9H993 441 aa19.46■□□□□ 0.71
PHGDH-216ENST00000641375 WDR33Q9C0J8 1336 aaKnown RBP19.46■□□□□ 0.71
PHGDH-216ENST00000641375 ATP2B4P23634 1241 aa19.45■□□□□ 0.7
PHGDH-216ENST00000641375 ZNF804AQ7Z570 1209 aa19.45■□□□□ 0.7
PHGDH-216ENST00000641375 RALYLQ86SE5 291 aaKnown RBP19.45■□□□□ 0.7
PHGDH-216ENST00000641375 TRDNQ13061 729 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 TXNRD3Q86VQ6 643 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 IFNL3Q8IZI9 196 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 BRF1Q92994 677 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 NAPBQ9H115 298 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 NSFL1CQ9UNZ2 370 aaKnown RBP19.44■□□□□ 0.7
PHGDH-216ENST00000641375 LRRC37AA6NMS7 1700 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 MMP10P09238 476 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 MCM5P33992 734 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 PDE6BP35913 854 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 NAA16Q6N069 864 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-216ENST00000641375 NECAB1Q8N987 351 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 PODXL2Q9NZ53 605 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 WDR19Q8NEZ3 1342 aa19.44■□□□□ 0.7
PHGDH-216ENST00000641375 GJB2P29033 226 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 GPSM2P81274 684 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 ST3GAL1Q11201 340 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 CHD4Q14839 1912 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 SPTY2D1Q68D10 685 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-216ENST00000641375 MAST2Q6P0Q8 1798 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 LCORLQ8N3X6 602 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 CAMKK2Q96RR4 588 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 GGA1Q9UJY5 639 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 QSER1Q2KHR3 1735 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 MAGEB6P1A0A0J9YX57 407 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 GSG1L2A8MUP6 293 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 GTF3C6Q969F1 213 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 CHMP4CQ96CF2 233 aa19.43■□□□□ 0.7
PHGDH-216ENST00000641375 SLC15A2Q16348 729 aa19.42■□□□□ 0.7
PHGDH-216ENST00000641375 MB21D2Q8IYB1 491 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-216ENST00000641375 MIGA1Q8NAN2 632 aa19.42■□□□□ 0.7
PHGDH-216ENST00000641375 WDR66Q8TBY9 1149 aa19.42■□□□□ 0.7
PHGDH-216ENST00000641375 LRRC2Q9BYS8 371 aa19.42■□□□□ 0.7
PHGDH-216ENST00000641375 SALL1Q9NSC2 1324 aa19.42■□□□□ 0.7
PHGDH-216ENST00000641375 UFL1O94874 794 aa19.42■□□□□ 0.7
PHGDH-216ENST00000641375 SRGNP10124 158 aa19.42■□□□□ 0.7
PHGDH-216ENST00000641375 NPR1P16066 1061 aa19.42■□□□□ 0.7
PHGDH-216ENST00000641375 EZH2Q15910 746 aaKnown RBP19.42■□□□□ 0.7
PHGDH-216ENST00000641375 SKOR2Q2VWA4 1001 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-216ENST00000641375 SP8Q8IXZ3 490 aa19.42■□□□□ 0.7
PHGDH-216ENST00000641375 TDRD7Q8NHU6 1098 aaKnown RBP19.42■□□□□ 0.7
PHGDH-216ENST00000641375 NSUN4Q96CB9 384 aaKnown RBP19.42■□□□□ 0.7
PHGDH-216ENST00000641375 EPB41L4AQ9HCS5 686 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-216ENST00000641375 PPEF1O14829 653 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-216ENST00000641375 STX6O43752 255 aa19.41■□□□□ 0.7
PHGDH-216ENST00000641375 TRAK2O60296 914 aa19.41■□□□□ 0.7
PHGDH-216ENST00000641375 SYT1P21579 422 aa19.41■□□□□ 0.7
PHGDH-216ENST00000641375 ALDH1B1P30837 517 aa19.41■□□□□ 0.7
PHGDH-216ENST00000641375 EN1Q05925 392 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-216ENST00000641375 CHAF1AQ13111 956 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-216ENST00000641375 STK3Q13188 491 aa19.41■□□□□ 0.7
PHGDH-216ENST00000641375 ADGRA1Q86SQ6 560 aa19.41■□□□□ 0.7
PHGDH-216ENST00000641375 STK32BQ9NY57 414 aa19.41■□□□□ 0.7
PHGDH-216ENST00000641375 PDCP20941 246 aa19.4■□□□□ 0.7
PHGDH-216ENST00000641375 TDO2P48775 406 aa19.4■□□□□ 0.7
PHGDH-216ENST00000641375 ZNF274Q96GC6 653 aaPredicted RBP19.4■□□□□ 0.7
PHGDH-216ENST00000641375 NBPF3Q9H094 633 aa19.4■□□□□ 0.7
PHGDH-216ENST00000641375 KIAA1551Q9HCM1 1747 aa19.4■□□□□ 0.7
PHGDH-216ENST00000641375 PFKFB2O60825 505 aa19.4■□□□□ 0.7
PHGDH-216ENST00000641375 MECOMQ03112 1051 aa19.4■□□□□ 0.7
PHGDH-216ENST00000641375 RIOK1Q9BRS2 568 aaKnown RBP19.4■□□□□ 0.7
PHGDH-216ENST00000641375 LTBP1Q14766 1721 aa19.39■□□□□ 0.7
PHGDH-216ENST00000641375 PRC1O43663 620 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 EVCP57679 992 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 MCTP1Q6DN14 999 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 TBC1D10CQ8IV04 446 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 ATP6V0A2Q9Y487 856 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 DUOX1Q9NRD9 1551 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 TIAM2Q8IVF5 1701 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 PRKAB2O43741 272 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 APOBRQ0VD83 1088 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 GSE1Q14687 1217 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 CHST3Q7LGC8 479 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 LLPHQ9BRT6 129 aaKnown RBP19.39■□□□□ 0.69
PHGDH-216ENST00000641375 CNNM2Q9H8M5 875 aa19.39■□□□□ 0.69
PHGDH-216ENST00000641375 ZSCAN22P10073 491 aaPredicted RBP19.38■□□□□ 0.69
PHGDH-216ENST00000641375 SF3B2Q13435 895 aaKnown RBP19.38■□□□□ 0.69
PHGDH-216ENST00000641375 FOXD4L5Q5VV16 416 aaPredicted RBP19.38■□□□□ 0.69
PHGDH-216ENST00000641375 TBC1D16Q8TBP0 767 aa19.38■□□□□ 0.69
PHGDH-216ENST00000641375 FOXD4L4Q8WXT5 416 aaPredicted RBP19.38■□□□□ 0.69
PHGDH-216ENST00000641375 MASTLQ96GX5 879 aa19.38■□□□□ 0.69
PHGDH-216ENST00000641375 PRDX5P30044 214 aa19.37■□□□□ 0.69
PHGDH-216ENST00000641375 MSL1Q68DK7 614 aa19.37■□□□□ 0.69
PHGDH-216ENST00000641375 SLC51AQ86UW1 340 aa19.37■□□□□ 0.69
PHGDH-216ENST00000641375 ZNF384Q8TF68 577 aa19.37■□□□□ 0.69
PHGDH-216ENST00000641375 ATP6V1DQ9Y5K8 247 aa19.37■□□□□ 0.69
PHGDH-216ENST00000641375 IL1R1P14778 569 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms