RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	GPAA1	O43292	621 aa		13.34	□□□□□ -0.27
GFAP-238	ENST00000640859	F13A1	P00488	732 aa		13.34	□□□□□ -0.27
GFAP-238	ENST00000640859	PDIA4	P13667	645 aa	Known RBP	13.34	□□□□□ -0.27
GFAP-238	ENST00000640859	TM4SF1	P30408	202 aa		13.34	□□□□□ -0.27
GFAP-238	ENST00000640859	SPATA5	Q8NB90	893 aa		13.34	□□□□□ -0.27
GFAP-238	ENST00000640859	GPT2	Q8TD30	523 aa		13.34	□□□□□ -0.27
GFAP-238	ENST00000640859	POLRMT	O00411	1230 aa	Known RBP	13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	FGA	P02671	866 aa		13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	PDE6A	P16499	860 aa		13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	PDE6B	P35913	854 aa		13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	RASGRF1	Q13972	1273 aa		13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	SLC9C2	Q5TAH2	1124 aa		13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	ANKRD18A	Q8IVF6	992 aa		13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	FBXL16	Q8N461	479 aa		13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	TMEM87A	Q8NBN3	555 aa		13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	BSDC1	Q9NW68	430 aa	Predicted RBP	13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	WWC3	Q9ULE0	1092 aa		13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	ZNF532	Q9HCE3	1301 aa		13.33	□□□□□ -0.28
GFAP-238	ENST00000640859	PFKFB2	O60825	505 aa		13.32	□□□□□ -0.28
GFAP-238	ENST00000640859	IDH1	O75874	414 aa	Known RBP	13.32	□□□□□ -0.28
GFAP-238	ENST00000640859	BCAM	P50895	628 aa		13.32	□□□□□ -0.28
GFAP-238	ENST00000640859	UBE4A	Q14139	1066 aa		13.32	□□□□□ -0.28
GFAP-238	ENST00000640859	IMMT	Q16891	758 aa	Known RBP	13.32	□□□□□ -0.28
GFAP-238	ENST00000640859	GAS2L3	Q86XJ1	694 aa		13.32	□□□□□ -0.28
GFAP-238	ENST00000640859	GTF3C6	Q969F1	213 aa		13.32	□□□□□ -0.28
GFAP-238	ENST00000640859	SGIP1	Q9BQI5	828 aa		13.32	□□□□□ -0.28
GFAP-238	ENST00000640859	C4A	P0C0L4	1744 aa		13.31	□□□□□ -0.28
GFAP-238	ENST00000640859	DTNB	O60941	627 aa		13.31	□□□□□ -0.28
GFAP-238	ENST00000640859	XRCC6	P12956	609 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
GFAP-238	ENST00000640859	PDC	P20941	246 aa		13.31	□□□□□ -0.28
GFAP-238	ENST00000640859	MRE11	P49959	708 aa		13.31	□□□□□ -0.28
GFAP-238	ENST00000640859	ZNF445	P59923	1031 aa		13.31	□□□□□ -0.28
GFAP-238	ENST00000640859	TGFB2	P61812	414 aa		13.31	□□□□□ -0.28
GFAP-238	ENST00000640859	DDR1	Q08345	913 aa		13.31	□□□□□ -0.28
GFAP-238	ENST00000640859	ALX1	Q15699	326 aa		13.31	□□□□□ -0.28
GFAP-238	ENST00000640859	BRF1	Q92994	677 aa		13.31	□□□□□ -0.28
GFAP-238	ENST00000640859	LRRC2	Q9BYS8	371 aa		13.31	□□□□□ -0.28
GFAP-238	ENST00000640859	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.31	□□□□□ -0.28
GFAP-238	ENST00000640859		H0YIN7	160 aa		13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	MBD3	O95983	291 aa		13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	NCL	P19338	710 aa	Known RBP	13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	EVC	P57679	992 aa		13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	MAP3K12	Q12852	859 aa		13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	STK3	Q13188	491 aa		13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	LARP1B	Q659C4	914 aa	Known RBP	13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	USP48	Q86UV5	1035 aa		13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	REM2	Q8IYK8	340 aa	Predicted RBP	13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	SMARCC2	Q8TAQ2	1214 aa		13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	STRBP	Q96SI9	672 aa	Known RBP	13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	LLPH	Q9BRT6	129 aa	Known RBP	13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	BRIP1	Q9BX63	1249 aa		13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	TMX4	Q9H1E5	349 aa	Predicted RBP	13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	MINPP1	Q9UNW1	487 aa		13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	ATP6V1D	Q9Y5K8	247 aa		13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	ZNF804B	A4D1E1	1349 aa		13.3	□□□□□ -0.28
GFAP-238	ENST00000640859	APOBR	Q0VD83	1088 aa		13.29	□□□□□ -0.28
GFAP-238	ENST00000640859	SCRN1	Q12765	414 aa		13.29	□□□□□ -0.28
GFAP-238	ENST00000640859	PRR5L	Q6MZQ0	368 aa		13.29	□□□□□ -0.28
GFAP-238	ENST00000640859	CAVIN1	Q6NZI2	390 aa	Known RBP	13.29	□□□□□ -0.28
GFAP-238	ENST00000640859	CELF1	Q92879	486 aa	Known RBP	13.29	□□□□□ -0.28
GFAP-238	ENST00000640859	ZNF274	Q96GC6	653 aa	Predicted RBP	13.29	□□□□□ -0.28
GFAP-238	ENST00000640859	NLRP3	Q96P20	1036 aa		13.29	□□□□□ -0.28
GFAP-238	ENST00000640859	SYT17	Q9BSW7	474 aa		13.29	□□□□□ -0.28
GFAP-238	ENST00000640859	CNPY2	Q9Y2B0	182 aa		13.29	□□□□□ -0.28
GFAP-238	ENST00000640859	WDR19	Q8NEZ3	1342 aa		13.29	□□□□□ -0.28
GFAP-238	ENST00000640859	ZNF213	O14771	459 aa		13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	JAK2	O60674	1132 aa		13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	GADD45B	O75293	160 aa	Predicted RBP	13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	HAND2	P61296	217 aa		13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	RPS8	P62241	208 aa	Known RBP	13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	FGD1	P98174	961 aa		13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	ZSCAN23	Q3MJ62	389 aa		13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	MAGEB6	Q8N7X4	407 aa		13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	NBPF3	Q9H094	633 aa		13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	GRPEL1	Q9HAV7	217 aa		13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	RBM27	Q9P2N5	1060 aa	Known RBP	13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	ZMYM6	O95789	1325 aa		13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	SRCAP	Q6ZRS2	3230 aa		13.28	□□□□□ -0.28
GFAP-238	ENST00000640859	VPS37C	A5D8V6	355 aa	Predicted RBP	13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	PATL2	C9JE40	543 aa	Known RBP	13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	CTDNEP1	O95476	244 aa		13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	PDIA3	P30101	505 aa	Known RBP	13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	MCM5	P33992	734 aa		13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	ANTXR2	P58335	489 aa		13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	FBXO33	Q7Z6M2	555 aa		13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	NSUN7	Q8NE18	718 aa	Known RBP	13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	NCOA7	Q8NI08	942 aa		13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	RPGR	Q92834	1020 aa	Known RBP	13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	GDPD2	Q9HCC8	539 aa		13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	GNL3L	Q9NVN8	582 aa	Known RBP	13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	TMEM63C	Q9P1W3	806 aa		13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	BRPF3	Q9ULD4	1205 aa		13.27	□□□□□ -0.29
GFAP-238	ENST00000640859	WTIP	A6NIX2	430 aa	Predicted RBP	13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	PRC1	O43663	620 aa		13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	MBD4	O95243	580 aa		13.26	□□□□□ -0.29

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