RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 FAM193AP78312 1265 aa20.05■□□□□ 0.8
SCARB2-223ENST00000640640 OTUD7BQ6GQQ9 843 aa20.05■□□□□ 0.8
SCARB2-223ENST00000640640 CTAGE1Q96RT6 745 aa20.05■□□□□ 0.8
SCARB2-223ENST00000640640 JAK2O60674 1132 aa20.05■□□□□ 0.8
SCARB2-223ENST00000640640 ME3Q16798 604 aa20.05■□□□□ 0.8
SCARB2-223ENST00000640640 PPP4R3BQ5MIZ7 849 aa20.05■□□□□ 0.8
SCARB2-223ENST00000640640 PAXBP1Q9Y5B6 917 aa20.05■□□□□ 0.8
SCARB2-223ENST00000640640 ERBB3P21860 1342 aa20.05■□□□□ 0.8
SCARB2-223ENST00000640640 A2ML1A8K2U0 1454 aa20.05■□□□□ 0.8
SCARB2-223ENST00000640640 PATL2C9JE40 543 aaKnown RBP20.04■□□□□ 0.8
SCARB2-223ENST00000640640 TRMT1LQ7Z2T5 733 aaKnown RBP20.04■□□□□ 0.8
SCARB2-223ENST00000640640 UNC5CLQ8IV45 518 aa20.04■□□□□ 0.8
SCARB2-223ENST00000640640 ZNF532Q9HCE3 1301 aa20.04■□□□□ 0.8
SCARB2-223ENST00000640640 CDC42BPBQ9Y5S2 1711 aa20.04■□□□□ 0.8
SCARB2-223ENST00000640640 PSMA7O14818 248 aa20.04■□□□□ 0.8
SCARB2-223ENST00000640640 RILPL1Q5EBL4 403 aa20.04■□□□□ 0.8
SCARB2-223ENST00000640640 CDC37L1Q7L3B6 337 aa20.04■□□□□ 0.8
SCARB2-223ENST00000640640 CENPHQ9H3R5 247 aa20.04■□□□□ 0.8
SCARB2-223ENST00000640640 PRDM1O75626 825 aa20.04■□□□□ 0.8
SCARB2-223ENST00000640640 TRIM21P19474 475 aaKnown RBP20.04■□□□□ 0.8
SCARB2-223ENST00000640640 LEO1Q8WVC0 666 aaPredicted RBP20.04■□□□□ 0.8
SCARB2-223ENST00000640640 MROH5Q6ZUA9 1318 aa20.04■□□□□ 0.8
SCARB2-223ENST00000640640 E7EWF7 191 aa20.04■□□□□ 0.8
SCARB2-223ENST00000640640 GADD45BO75293 160 aaPredicted RBP20.04■□□□□ 0.8
SCARB2-223ENST00000640640 NPHP4O75161 1426 aaPredicted RBP20.03■□□□□ 0.8
SCARB2-223ENST00000640640 SPATA5Q8NB90 893 aa20.03■□□□□ 0.8
SCARB2-223ENST00000640640 SEC62Q99442 399 aaKnown RBP20.03■□□□□ 0.8
SCARB2-223ENST00000640640 CRACR2AQ9BSW2 395 aa20.03■□□□□ 0.8
SCARB2-223ENST00000640640 SPHKAPQ2M3C7 1700 aa20.03■□□□□ 0.8
SCARB2-223ENST00000640640 FAM98CQ17RN3 349 aaKnown RBP20.03■□□□□ 0.8
SCARB2-223ENST00000640640 JAKMIP3Q5VZ66 844 aa20.03■□□□□ 0.8
SCARB2-223ENST00000640640 ANO1Q5XXA6 986 aa20.03■□□□□ 0.8
SCARB2-223ENST00000640640 H0YHG0 523 aa20.03■□□□□ 0.8
SCARB2-223ENST00000640640 PAFAH1B1P43034 410 aa20.03■□□□□ 0.8
SCARB2-223ENST00000640640 RBM28Q9NW13 759 aaKnown RBP20.03■□□□□ 0.8
SCARB2-223ENST00000640640 PRAMEF22A3QJZ6 481 aa20.03■□□□□ 0.8
SCARB2-223ENST00000640640 DYNC1I1O14576 645 aa20.03■□□□□ 0.8
SCARB2-223ENST00000640640 DEXIO95424 95 aa20.03■□□□□ 0.8
SCARB2-223ENST00000640640 OGFOD1Q8N543 542 aa20.03■□□□□ 0.8
SCARB2-223ENST00000640640 PTGS1P23219 599 aa20.02■□□□□ 0.8
SCARB2-223ENST00000640640 DNA2P51530 1060 aa20.02■□□□□ 0.8
SCARB2-223ENST00000640640 ASIC1P78348 528 aa20.02■□□□□ 0.8
SCARB2-223ENST00000640640 RIMBP2O15034 1052 aa20.02■□□□□ 0.8
SCARB2-223ENST00000640640 MCM7P33993 719 aa20.02■□□□□ 0.8
SCARB2-223ENST00000640640 CROCC2H7BZ55 1655 aa20.02■□□□□ 0.79
SCARB2-223ENST00000640640 CTSWP56202 376 aa20.02■□□□□ 0.79
SCARB2-223ENST00000640640 RRP36Q96EU6 259 aaKnown RBP20.02■□□□□ 0.79
SCARB2-223ENST00000640640 CGNQ9P2M7 1197 aaKnown RBP20.02■□□□□ 0.79
SCARB2-223ENST00000640640 GNA11P29992 359 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 LRRC24Q50LG9 513 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 ELP1O95163 1332 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 IQUBQ8NA54 791 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 ZBTB38Q8NAP3 1195 aaPredicted RBP20.01■□□□□ 0.79
SCARB2-223ENST00000640640 HAUS7Q99871 368 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.01■□□□□ 0.79
SCARB2-223ENST00000640640 IFNKQ9P0W0 207 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 MYO1BO43795 1136 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 TRAF1Q13077 416 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 PKP1Q13835 747 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 DIS3L2Q8IYB7 885 aaKnown RBP20.01■□□□□ 0.79
SCARB2-223ENST00000640640 ERMNQ8TAM6 284 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 ZSWIM6Q9HCJ5 1215 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 PCCAP05165 728 aaPredicted RBP20.01■□□□□ 0.79
SCARB2-223ENST00000640640 TMEM63CQ9P1W3 806 aa20.01■□□□□ 0.79
SCARB2-223ENST00000640640 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.01■□□□□ 0.79
SCARB2-223ENST00000640640 AKR1B10O60218 316 aa20■□□□□ 0.79
SCARB2-223ENST00000640640 STX17P56962 302 aa20■□□□□ 0.79
SCARB2-223ENST00000640640 TEX11Q8IYF3 940 aa20■□□□□ 0.79
SCARB2-223ENST00000640640 CNKSR2Q8WXI2 1034 aa20■□□□□ 0.79
SCARB2-223ENST00000640640 MYL10Q9BUA6 226 aa20■□□□□ 0.79
SCARB2-223ENST00000640640 TTC6Q86TZ1 520 aa20■□□□□ 0.79
SCARB2-223ENST00000640640 GTF3C6Q969F1 213 aa20■□□□□ 0.79
SCARB2-223ENST00000640640 DBNLQ9UJU6 430 aaKnown RBP20■□□□□ 0.79
SCARB2-223ENST00000640640 SAMM50Q9Y512 469 aa20■□□□□ 0.79
SCARB2-223ENST00000640640 CETN1Q12798 172 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 DTHD1Q6ZMT9 781 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 DNAI1Q9UI46 699 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 TNNI2P48788 182 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 CBX1P83916 185 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 CCDC24Q8N4L8 307 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 V9GY48 417 aaPredicted RBP19.99■□□□□ 0.79
SCARB2-223ENST00000640640 UFL1O94874 794 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 RASEFQ8IZ41 740 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 PHKBQ93100 1093 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.99■□□□□ 0.79
SCARB2-223ENST00000640640 GLI2P10070 1586 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 MAP9Q49MG5 647 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 STXBP4Q6ZWJ1 553 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 CLSTN2Q9H4D0 955 aa19.99■□□□□ 0.79
SCARB2-223ENST00000640640 TBCAO75347 108 aaKnown RBP19.98■□□□□ 0.79
SCARB2-223ENST00000640640 CARD10Q9BWT7 1032 aa19.98■□□□□ 0.79
SCARB2-223ENST00000640640 MADDQ8WXG6 1647 aa19.98■□□□□ 0.79
SCARB2-223ENST00000640640 VWA3AA6NCI4 1184 aa19.98■□□□□ 0.79
SCARB2-223ENST00000640640 CTDSPL2Q05D32 466 aa19.98■□□□□ 0.79
SCARB2-223ENST00000640640 ZSWIM4Q9H7M6 989 aa19.98■□□□□ 0.79
SCARB2-223ENST00000640640 PTCH1Q13635 1447 aa19.98■□□□□ 0.79
SCARB2-223ENST00000640640 HSPD1P10809 573 aaKnown RBP19.98■□□□□ 0.79
SCARB2-223ENST00000640640 MYL5Q02045 173 aa19.98■□□□□ 0.79
SCARB2-223ENST00000640640 KRT79Q5XKE5 535 aa19.98■□□□□ 0.79
SCARB2-223ENST00000640640 TSPYL1Q9H0U9 437 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms