RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 B3GALT4O96024 378 aa9.07□□□□□ -0.96
CCDC7-216ENST00000640058 FCGRTP55899 365 aa9.07□□□□□ -0.96
CCDC7-216ENST00000640058 POU4F3Q15319 338 aa9.07□□□□□ -0.96
CCDC7-216ENST00000640058 SGO2Q562F6 1265 aa9.07□□□□□ -0.96
CCDC7-216ENST00000640058 TRIM42Q8IWZ5 723 aa9.07□□□□□ -0.96
CCDC7-216ENST00000640058 FAM20CQ8IXL6 584 aa9.07□□□□□ -0.96
CCDC7-216ENST00000640058 TRIM56Q9BRZ2 755 aaKnown RBP9.07□□□□□ -0.96
CCDC7-216ENST00000640058 CYP4F12Q9HCS2 524 aa9.07□□□□□ -0.96
CCDC7-216ENST00000640058 EXOSC6Q5RKV6 272 aaKnown RBP9.06□□□□□ -0.96
CCDC7-216ENST00000640058 DTHD1Q6ZMT9 781 aa9.06□□□□□ -0.96
CCDC7-216ENST00000640058 AEBP1Q8IUX7 1158 aa9.06□□□□□ -0.96
CCDC7-216ENST00000640058 ZSCAN29Q8IWY8 852 aaPredicted RBP9.06□□□□□ -0.96
CCDC7-216ENST00000640058 SETDB2Q96T68 719 aa9.06□□□□□ -0.96
CCDC7-216ENST00000640058 BCO2Q9BYV7 579 aa9.06□□□□□ -0.96
CCDC7-216ENST00000640058 IGLV1-40P01703 118 aa9.05□□□□□ -0.96
CCDC7-216ENST00000640058 CYP11A1P05108 521 aa9.05□□□□□ -0.96
CCDC7-216ENST00000640058 RXRBP28702 533 aa9.05□□□□□ -0.96
CCDC7-216ENST00000640058 FAAP100Q0VG06 881 aa9.05□□□□□ -0.96
CCDC7-216ENST00000640058 ENOX2Q16206 610 aaKnown RBP9.05□□□□□ -0.96
CCDC7-216ENST00000640058 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCDC7-216ENST00000640058 BEND4Q6ZU67 534 aa9.05□□□□□ -0.96
CCDC7-216ENST00000640058 SMG8Q8ND04 991 aaKnown RBP9.05□□□□□ -0.96
CCDC7-216ENST00000640058 CORO1BQ9BR76 489 aa9.05□□□□□ -0.96
CCDC7-216ENST00000640058 TIAF1O95411 115 aa9.04□□□□□ -0.96
CCDC7-216ENST00000640058 NXPE4Q6UWF7 544 aa9.04□□□□□ -0.96
CCDC7-216ENST00000640058 DDX54Q8TDD1 881 aaKnown RBP9.04□□□□□ -0.96
CCDC7-216ENST00000640058 ASB16Q96NS5 453 aa9.04□□□□□ -0.96
CCDC7-216ENST00000640058 SUGCTQ9HAC7 445 aa9.04□□□□□ -0.96
CCDC7-216ENST00000640058 MAP4P27816 1152 aaKnown RBP9.03□□□□□ -0.96
CCDC7-216ENST00000640058 PTPN12Q05209 780 aaKnown RBP9.03□□□□□ -0.96
CCDC7-216ENST00000640058 PDE3AQ14432 1141 aa9.03□□□□□ -0.96
CCDC7-216ENST00000640058 AKAP4Q5JQC9 854 aa9.03□□□□□ -0.96
CCDC7-216ENST00000640058 CLEC10AQ8IUN9 316 aa9.03□□□□□ -0.96
CCDC7-216ENST00000640058 ZC3H12CQ9C0D7 883 aaKnown RBP9.03□□□□□ -0.96
CCDC7-216ENST00000640058 GPN3Q9UHW5 284 aaPredicted RBP9.03□□□□□ -0.96
CCDC7-216ENST00000640058 WWC3Q9ULE0 1092 aa9.03□□□□□ -0.96
CCDC7-216ENST00000640058 FMR1Q06787 632 aaKnown RBP eCLIP9.02□□□□□ -0.97
CCDC7-216ENST00000640058 NFIAQ12857 509 aa9.02□□□□□ -0.97
CCDC7-216ENST00000640058 ARTNQ5T4W7 220 aa9.02□□□□□ -0.97
CCDC7-216ENST00000640058 FAM83CQ9BQN1 747 aa9.02□□□□□ -0.97
CCDC7-216ENST00000640058 ZFP64Q9NPA5 681 aa9.02□□□□□ -0.97
CCDC7-216ENST00000640058 RAD18Q9NS91 495 aa9.02□□□□□ -0.97
CCDC7-216ENST00000640058 RNF112Q9ULX5 631 aa9.02□□□□□ -0.97
CCDC7-216ENST00000640058 AKAP2Q9Y2D5 859 aa9.02□□□□□ -0.97
CCDC7-216ENST00000640058 HIF3AQ9Y2N7 669 aa9.02□□□□□ -0.97
CCDC7-216ENST00000640058 GSC2O15499 205 aa9.01□□□□□ -0.97
CCDC7-216ENST00000640058 EIF4EBP3O60516 100 aaPredicted RBP9.01□□□□□ -0.97
CCDC7-216ENST00000640058 ADH5P11766 374 aa9.01□□□□□ -0.97
CCDC7-216ENST00000640058 PDIA4P13667 645 aaKnown RBP9.01□□□□□ -0.97
CCDC7-216ENST00000640058 USP11P51784 963 aa9.01□□□□□ -0.97
CCDC7-216ENST00000640058 SOX4Q06945 474 aaPredicted RBP9.01□□□□□ -0.97
CCDC7-216ENST00000640058 LRP8Q14114 963 aa9.01□□□□□ -0.97
CCDC7-216ENST00000640058 RNF43Q68DV7 783 aa9.01□□□□□ -0.97
CCDC7-216ENST00000640058 CDPF1Q6NVV7 123 aa9.01□□□□□ -0.97
CCDC7-216ENST00000640058 C2CD4AQ8NCU7 369 aaPredicted RBP9.01□□□□□ -0.97
CCDC7-216ENST00000640058 FBLIM1Q8WUP2 373 aa9.01□□□□□ -0.97
CCDC7-216ENST00000640058 PPP4R2Q9NY27 417 aa9.01□□□□□ -0.97
CCDC7-216ENST00000640058 AP4E1Q9UPM8 1137 aa9.01□□□□□ -0.97
CCDC7-216ENST00000640058 PATL2C9JE40 543 aaKnown RBP9□□□□□ -0.97
CCDC7-216ENST00000640058 TGFB1P01137 390 aa9□□□□□ -0.97
CCDC7-216ENST00000640058 SSTR4P31391 388 aa9□□□□□ -0.97
CCDC7-216ENST00000640058 RPS26P11Q5JNZ5 115 aaPredicted RBP9□□□□□ -0.97
CCDC7-216ENST00000640058 HYAL3O43820 417 aaPredicted RBP8.99□□□□□ -0.97
CCDC7-216ENST00000640058 AP3B2Q13367 1082 aa8.99□□□□□ -0.97
CCDC7-216ENST00000640058 NFKBIBQ15653 356 aa8.99□□□□□ -0.97
CCDC7-216ENST00000640058 HP1BP3Q5SSJ5 553 aaPredicted RBP8.99□□□□□ -0.97
CCDC7-216ENST00000640058 DYMQ7RTS9 669 aa8.99□□□□□ -0.97
CCDC7-216ENST00000640058 MFSD14AQ96MC6 490 aa8.99□□□□□ -0.97
CCDC7-216ENST00000640058 DBNDD2Q9BQY9 259 aa8.99□□□□□ -0.97
CCDC7-216ENST00000640058 ACTL7BQ9Y614 415 aa8.99□□□□□ -0.97
CCDC7-216ENST00000640058 P4HBP07237 508 aaKnown RBP8.98□□□□□ -0.97
CCDC7-216ENST00000640058 LIG1P18858 919 aa8.98□□□□□ -0.97
CCDC7-216ENST00000640058 RAB6AP20340 208 aa8.98□□□□□ -0.97
CCDC7-216ENST00000640058 ZDHHC13Q8IUH4 622 aa8.98□□□□□ -0.97
CCDC7-216ENST00000640058 SHKBP1Q8TBC3 707 aa8.98□□□□□ -0.97
CCDC7-216ENST00000640058 ZFYVE1Q9HBF4 777 aa8.98□□□□□ -0.97
CCDC7-216ENST00000640058 FAM95CA0A1B0GW59 222 aa8.97□□□□□ -0.97
CCDC7-216ENST00000640058 ATP2B2Q01814 1243 aa8.97□□□□□ -0.97
CCDC7-216ENST00000640058 SLC51AQ86UW1 340 aa8.97□□□□□ -0.97
CCDC7-216ENST00000640058 FBXL6Q8N531 539 aa8.97□□□□□ -0.97
CCDC7-216ENST00000640058 WDR18Q9BV38 432 aa8.97□□□□□ -0.97
CCDC7-216ENST00000640058 CCDC86Q9H6F5 360 aaKnown RBP8.97□□□□□ -0.97
CCDC7-216ENST00000640058 AOC2O75106 756 aa8.96□□□□□ -0.98
CCDC7-216ENST00000640058 XRCC5P13010 732 aaKnown RBP8.96□□□□□ -0.98
CCDC7-216ENST00000640058 PPP2R3AQ06190 1150 aa8.96□□□□□ -0.98
CCDC7-216ENST00000640058 FBF1Q8TES7 1133 aa8.96□□□□□ -0.98
CCDC7-216ENST00000640058 WDR89Q96FK6 387 aaPredicted RBP8.96□□□□□ -0.98
CCDC7-216ENST00000640058 OSBPL7Q9BZF2 842 aa8.96□□□□□ -0.98
CCDC7-216ENST00000640058 TMEM39AQ9NV64 488 aa8.96□□□□□ -0.98
CCDC7-216ENST00000640058 WDR64B1ANS9 1081 aa8.95□□□□□ -0.98
CCDC7-216ENST00000640058 ALG1LQ6GMV1 187 aa8.95□□□□□ -0.98
CCDC7-216ENST00000640058 PAOXQ6QHF9 649 aa8.95□□□□□ -0.98
CCDC7-216ENST00000640058 TPTE2Q6XPS3 522 aa8.95□□□□□ -0.98
CCDC7-216ENST00000640058 NBPF11Q86T75 865 aa8.95□□□□□ -0.98
CCDC7-216ENST00000640058 SHISA5Q8N114 240 aa8.95□□□□□ -0.98
CCDC7-216ENST00000640058 KCNB2Q92953 911 aa8.95□□□□□ -0.98
CCDC7-216ENST00000640058 FAM105AQ9NUU6 356 aa8.95□□□□□ -0.98
CCDC7-216ENST00000640058 PCMTD2Q9NV79 361 aa8.95□□□□□ -0.98
CCDC7-216ENST00000640058 FBXO24O75426 580 aa8.94□□□□□ -0.98
CCDC7-216ENST00000640058 NFICP08651 508 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms