RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-223ENST00000640001 USP28Q96RU2 1077 aa8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 CCDC196A0A1B0GTZ2 297 aa8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 SPTLC2O15270 562 aa8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 NR1I2O75469 434 aa8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 NAA16Q6N069 864 aaPredicted RBP8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 ERCC4Q92889 916 aaPredicted RBP8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 KRT23Q9C075 422 aa8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 PIH1D3Q9NQM4 214 aaKnown RBP8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 CLIP2Q9UDT6 1046 aa8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 MAGEB6P1A0A0J9YX57 407 aa8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 NKX1-1Q15270 411 aaPredicted RBP8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 RTN1Q16799 776 aa8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 HS1BP3Q53T59 392 aa8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 IQCA1Q86XH1 822 aa8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 CLSTN2Q9H4D0 955 aa8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 NOL7Q9UMY1 257 aaKnown RBP8.99□□□□□ -0.97
HNRNPU-223ENST00000640001 SLIT3O75094 1523 aa8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 ADD1P35611 737 aaKnown RBP8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 KCNG4Q8TDN1 519 aa8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 ZNF274Q96GC6 653 aaPredicted RBP8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 CNNM2Q9H8M5 875 aa8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 PES1O00541 588 aaKnown RBP8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 RFC4P35249 363 aa8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 USP5P45974 858 aa8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 GYG1P46976 350 aa8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 CASP7P55210 303 aa8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 C17orf53Q8N3J3 647 aaPredicted RBP8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 CHD2O14647 1828 aaKnown RBP8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 SERPINC1P01008 464 aa8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 TRIM28Q13263 835 aaKnown RBP8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 FAM182BQ5T319 152 aa8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 CCDC186Q7Z3E2 898 aa8.98□□□□□ -0.97
HNRNPU-223ENST00000640001 PRDM1O75626 825 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 ADD2P35612 726 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 COL9A3Q14050 684 aaPredicted RBP8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 PDILTQ8N807 584 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 TMEM87AQ8NBN3 555 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 CATIPQ7Z7H3 387 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 ESR2Q92731 530 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 AK7Q96M32 723 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 TFCP2L1Q9NZI6 479 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 ERVV-1B6SEH8 477 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 CHRNDQ07001 517 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 HOMER1Q86YM7 354 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 AOPEPQ8N6M6 819 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 CBX8Q9HC52 389 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 SYKP43405 635 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 RESTQ13127 1097 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 USPL1Q5W0Q7 1092 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 IFNL3Q8IZI9 196 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 CNNM3Q8NE01 707 aa8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 CTCFLQ8NI51 663 aaPredicted RBP8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 RTCBQ9Y3I0 505 aaKnown RBP8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 FAM208AQ9UK61 1670 aaKnown RBP8.97□□□□□ -0.97
HNRNPU-223ENST00000640001 COL5A2P05997 1499 aaPredicted RBP8.96□□□□□ -0.97
HNRNPU-223ENST00000640001 TULP1O00294 542 aaPredicted RBP8.96□□□□□ -0.97
HNRNPU-223ENST00000640001 GNAT2P19087 354 aa8.96□□□□□ -0.97
HNRNPU-223ENST00000640001 PTGS1P23219 599 aa8.96□□□□□ -0.97
HNRNPU-223ENST00000640001 FAM160A1Q05DH4 1040 aa8.96□□□□□ -0.97
HNRNPU-223ENST00000640001 TMEM87BQ96K49 555 aa8.96□□□□□ -0.97
HNRNPU-223ENST00000640001 GJB4Q9NTQ9 266 aa8.96□□□□□ -0.97
HNRNPU-223ENST00000640001 PRKAB2O43741 272 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 RASGRF1Q13972 1273 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 UBE3CQ15386 1083 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 TSGA10IPQ3SY00 556 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 TPTE2Q6XPS3 522 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 SMIM5Q71RC9 77 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 BRAPQ7Z569 592 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 SDR42E1Q8WUS8 393 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 MKNK2Q9HBH9 465 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 CCNL1Q9UK58 526 aaPredicted RBP8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 RIPOR2Q9Y4F9 1068 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 RFX7Q2KHR2 1363 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 A0A087WWV3 80 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 TSPY2A6NKD2 308 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 PATL2C9JE40 543 aaKnown RBP8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 KCNQ2O43526 872 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 NOLC1Q14978 699 aaKnown RBP eCLIP8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 IFIT1BQ5T764 474 aaKnown RBP8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 KRT40Q6A162 431 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 LRP10Q7Z4F1 713 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 CMTR1Q8N1G2 835 aaKnown RBP8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 KCNB2Q92953 911 aa8.96□□□□□ -0.98
HNRNPU-223ENST00000640001 KIF1AQ12756 1690 aa8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 MARCH6O60337 910 aa8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 OFD1O75665 1012 aa8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 RPGRQ92834 1020 aaKnown RBP8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 CRNKL1Q9BZJ0 848 aaKnown RBP8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 INCENPQ9NQS7 918 aa8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 CARMIL3Q8ND23 1372 aa8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 PALLDQ8WX93 1383 aa8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 ST3GAL1Q11201 340 aa8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 ANO1Q5XXA6 986 aa8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 CDHR2Q9BYE9 1310 aa8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 MED1Q15648 1581 aaPredicted RBP8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 AKNAD1Q5T1N1 836 aa8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 C16orf45Q96MC5 204 aaPredicted RBP8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 NYXQ9GZU5 481 aa8.95□□□□□ -0.98
HNRNPU-223ENST00000640001 ELP1O95163 1332 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms