RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 SHTN1A0MZ66 631 aa9.33□□□□□ -0.92
NECAP1-220ENST00000639841 FOSP01100 380 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-220ENST00000639841 MYL1P05976 194 aa9.33□□□□□ -0.92
NECAP1-220ENST00000639841 POU5F1BQ06416 359 aa9.33□□□□□ -0.92
NECAP1-220ENST00000639841 C10orf62Q5T681 223 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-220ENST00000639841 ABTB2Q8N961 1025 aa9.33□□□□□ -0.92
NECAP1-220ENST00000639841 EDEM1Q92611 657 aa9.33□□□□□ -0.92
NECAP1-220ENST00000639841 MARF1Q9Y4F3 1742 aaKnown RBP9.33□□□□□ -0.92
NECAP1-220ENST00000639841 SOS2Q07890 1332 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-220ENST00000639841 STAU1O95793 577 aaKnown RBP9.32□□□□□ -0.92
NECAP1-220ENST00000639841 MCL1Q07820 350 aa9.32□□□□□ -0.92
NECAP1-220ENST00000639841 PPARGC1BQ86YN6 1023 aaKnown RBP9.32□□□□□ -0.92
NECAP1-220ENST00000639841 ANAPC16Q96DE5 110 aa9.32□□□□□ -0.92
NECAP1-220ENST00000639841 ATRNO75882 1429 aa9.32□□□□□ -0.92
NECAP1-220ENST00000639841 NRDCO43847 1150 aa9.32□□□□□ -0.92
NECAP1-220ENST00000639841 ZNF500O60304 480 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-220ENST00000639841 BRD3Q15059 726 aa9.32□□□□□ -0.92
NECAP1-220ENST00000639841 NBPF20Q3BBV1 942 aa9.32□□□□□ -0.92
NECAP1-220ENST00000639841 PPP4R4Q6NUP7 873 aa9.32□□□□□ -0.92
NECAP1-220ENST00000639841 BRICD5Q6PL45 260 aa9.32□□□□□ -0.92
NECAP1-220ENST00000639841 EVA1BQ9NVM1 165 aa9.32□□□□□ -0.92
NECAP1-220ENST00000639841 NPHP3Q7Z494 1330 aa9.31□□□□□ -0.92
NECAP1-220ENST00000639841 USP17L7P0C7H9 530 aa9.31□□□□□ -0.92
NECAP1-220ENST00000639841 IRS1P35568 1242 aa9.31□□□□□ -0.92
NECAP1-220ENST00000639841 ZRSR2Q15696 482 aaKnown RBP9.31□□□□□ -0.92
NECAP1-220ENST00000639841 THNSL2Q86YJ6 484 aa9.31□□□□□ -0.92
NECAP1-220ENST00000639841 NAP1L4Q99733 375 aaKnown RBP9.31□□□□□ -0.92
NECAP1-220ENST00000639841 CD2APQ9Y5K6 639 aa9.31□□□□□ -0.92
NECAP1-220ENST00000639841 KIF1AQ12756 1690 aa9.31□□□□□ -0.92
NECAP1-220ENST00000639841 CNGA1P29973 690 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 CDC27P30260 824 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 C2orf27AQ580R0 203 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 ARSIQ5FYB1 569 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 PPP4R3BQ5MIZ7 849 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 PCGF6Q9BYE7 350 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-220ENST00000639841 ZNF700Q9H0M5 742 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 DNAJC25Q9H1X3 360 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 F6X3S4 739 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 CCNYL3P0C7X3 344 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 SCNN1DP51172 638 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 C2orf49Q9BVC5 232 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-220ENST00000639841 CARD14Q9BXL6 1004 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 JADE2Q9NQC1 790 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 USP21Q9UK80 565 aa9.3□□□□□ -0.92
NECAP1-220ENST00000639841 CLTCL1P53675 1640 aa9.29□□□□□ -0.92
NECAP1-220ENST00000639841 ERBB3P21860 1342 aa9.29□□□□□ -0.92
NECAP1-220ENST00000639841 MYOM2P54296 1465 aa9.29□□□□□ -0.92
NECAP1-220ENST00000639841 METP08581 1390 aa9.29□□□□□ -0.92
NECAP1-220ENST00000639841 SMAD7O15105 426 aaKnown RBP9.29□□□□□ -0.92
NECAP1-220ENST00000639841 ETFBKMTQ8IXQ9 262 aa9.29□□□□□ -0.92
NECAP1-220ENST00000639841 JMYQ8N9B5 988 aa9.29□□□□□ -0.92
NECAP1-220ENST00000639841 EPS8L3Q8TE67 593 aaKnown RBP9.29□□□□□ -0.92
NECAP1-220ENST00000639841 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.29□□□□□ -0.92
NECAP1-220ENST00000639841 FAM8A1Q9UBU6 413 aa9.29□□□□□ -0.92
NECAP1-220ENST00000639841 INTUQ9ULD6 942 aa9.29□□□□□ -0.92
NECAP1-220ENST00000639841 LHX6Q9UPM6 363 aa9.29□□□□□ -0.92
NECAP1-220ENST00000639841 PDPK1O15530 556 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 LIG1P18858 919 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 IFRD2Q12894 506 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-220ENST00000639841 RASGRF1Q13972 1273 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 C21orf62-AS1Q17RA5 79 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 PPM1EQ8WY54 764 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 SEPT9Q9UHD8 586 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-220ENST00000639841 SCTRP47872 440 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 DDR2Q16832 855 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 USPL1Q5W0Q7 1092 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-220ENST00000639841 PODNQ7Z5L7 613 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 SH3RF1Q7Z6J0 888 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 FAM169BQ8N8A8 192 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 SVIPQ8NHG7 77 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 TTC8Q8TAM2 541 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 MYO19Q96H55 970 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 SHDQ96IW2 340 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 ST7Q9NRC1 585 aa9.28□□□□□ -0.92
NECAP1-220ENST00000639841 R3HCC1Q9Y3T6 440 aaKnown RBP9.28□□□□□ -0.92
NECAP1-220ENST00000639841 LRP5O75197 1615 aa9.27□□□□□ -0.92
NECAP1-220ENST00000639841 KNDC1Q76NI1 1749 aa9.27□□□□□ -0.93
NECAP1-220ENST00000639841 BLMP54132 1417 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-220ENST00000639841 POTEFA5A3E0 1075 aa9.27□□□□□ -0.93
NECAP1-220ENST00000639841 PPP1R12BO60237 982 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-220ENST00000639841 ASMTLO95671 621 aa9.27□□□□□ -0.93
NECAP1-220ENST00000639841 STAT3P40763 770 aa9.27□□□□□ -0.93
NECAP1-220ENST00000639841 TCEA2Q15560 299 aa9.27□□□□□ -0.93
NECAP1-220ENST00000639841 TBCELQ5QJ74 424 aa9.27□□□□□ -0.93
NECAP1-220ENST00000639841 MYO1HQ8N1T3 1032 aa9.27□□□□□ -0.93
NECAP1-220ENST00000639841 CEP63Q96MT8 703 aa9.27□□□□□ -0.93
NECAP1-220ENST00000639841 INO80BQ9C086 356 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-220ENST00000639841 A6NHS1 94 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 GIPC1O14908 333 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 MCCP23508 829 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 PMLP29590 882 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 RAB27AP51159 221 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 CACTIN-AS1Q8N1I8 211 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 THAP11Q96EK4 314 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 RSRP1Q9BUV0 290 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 SCINQ9Y6U3 715 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 PPLO60437 1756 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 CCDC144AA2RUR9 1427 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms