RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.5■□□□□ 0.23
ATRIP-208ENST00000639561 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
ATRIP-208ENST00000639561 HACL1Q9UJ83 578 aa16.5■□□□□ 0.23
ATRIP-208ENST00000639561 AKAP2Q9Y2D5 859 aa16.5■□□□□ 0.23
ATRIP-208ENST00000639561 COL4A5P29400 1685 aa16.5■□□□□ 0.23
ATRIP-208ENST00000639561 PSMA5P28066 241 aa16.5■□□□□ 0.23
ATRIP-208ENST00000639561 ME3Q16798 604 aa16.5■□□□□ 0.23
ATRIP-208ENST00000639561 TAF1DQ9H5J8 278 aaPredicted RBP16.5■□□□□ 0.23
ATRIP-208ENST00000639561 DTNBO60941 627 aa16.49■□□□□ 0.23
ATRIP-208ENST00000639561 PRPF40AO75400 957 aaKnown RBP16.49■□□□□ 0.23
ATRIP-208ENST00000639561 SCARF1Q14162 830 aa16.49■□□□□ 0.23
ATRIP-208ENST00000639561 L1TD1Q5T7N2 865 aaKnown RBP16.49■□□□□ 0.23
ATRIP-208ENST00000639561 LDHAL6AQ6ZMR3 332 aa16.49■□□□□ 0.23
ATRIP-208ENST00000639561 LDHDQ86WU2 507 aa16.49■□□□□ 0.23
ATRIP-208ENST00000639561 CCDC83Q8IWF9 413 aa16.49■□□□□ 0.23
ATRIP-208ENST00000639561 TPCN1Q9ULQ1 816 aa16.49■□□□□ 0.23
ATRIP-208ENST00000639561 PDE8AO60658 829 aa16.49■□□□□ 0.23
ATRIP-208ENST00000639561 RPS6KB1P23443 525 aa16.49■□□□□ 0.23
ATRIP-208ENST00000639561 ZMYM1Q5SVZ6 1142 aa16.49■□□□□ 0.23
ATRIP-208ENST00000639561 BLOC1S2Q6QNY1 142 aa16.49■□□□□ 0.23
ATRIP-208ENST00000639561 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.49■□□□□ 0.23
ATRIP-208ENST00000639561 ANKRD18BA2A2Z9 1011 aa16.48■□□□□ 0.23
ATRIP-208ENST00000639561 CYP21A2P08686 494 aa16.48■□□□□ 0.23
ATRIP-208ENST00000639561 XRCC6P12956 609 aaKnown RBP eCLIP16.48■□□□□ 0.23
ATRIP-208ENST00000639561 METTL24Q5JXM2 366 aa16.48■□□□□ 0.23
ATRIP-208ENST00000639561 CCDC158Q5M9N0 1113 aa16.48■□□□□ 0.23
ATRIP-208ENST00000639561 VGLL2Q8N8G2 317 aa16.48■□□□□ 0.23
ATRIP-208ENST00000639561 SH2B1Q9NRF2 756 aaPredicted RBP16.48■□□□□ 0.23
ATRIP-208ENST00000639561 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
ATRIP-208ENST00000639561 PNMA8AQ86V59 439 aaPredicted RBP16.48■□□□□ 0.23
ATRIP-208ENST00000639561 GAS2L3Q86XJ1 694 aa16.48■□□□□ 0.23
ATRIP-208ENST00000639561 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
ATRIP-208ENST00000639561 HELLSQ9NRZ9 838 aa16.48■□□□□ 0.23
ATRIP-208ENST00000639561 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
ATRIP-208ENST00000639561 MAST3O60307 1309 aa16.47■□□□□ 0.23
ATRIP-208ENST00000639561 WDR33Q9C0J8 1336 aaKnown RBP16.47■□□□□ 0.23
ATRIP-208ENST00000639561 ADAMTSL1Q8N6G6 1762 aa16.47■□□□□ 0.23
ATRIP-208ENST00000639561 LMOD1P29536 600 aaPredicted RBP16.47■□□□□ 0.23
ATRIP-208ENST00000639561 TOB2Q14106 344 aaPredicted RBP16.47■□□□□ 0.23
ATRIP-208ENST00000639561 ATP2B3Q16720 1220 aa16.47■□□□□ 0.23
ATRIP-208ENST00000639561 AOC3Q16853 763 aa16.47■□□□□ 0.23
ATRIP-208ENST00000639561 GORABQ5T7V8 394 aa16.47■□□□□ 0.23
ATRIP-208ENST00000639561 PI16Q6UXB8 463 aa16.47■□□□□ 0.23
ATRIP-208ENST00000639561 SLC51AQ86UW1 340 aa16.47■□□□□ 0.23
ATRIP-208ENST00000639561 TICAM2Q86XR7 235 aa16.47■□□□□ 0.23
ATRIP-208ENST00000639561 NECAB1Q8N987 351 aa16.47■□□□□ 0.23
ATRIP-208ENST00000639561 GPT2Q8TD30 523 aa16.47■□□□□ 0.23
ATRIP-208ENST00000639561 GJA3Q9Y6H8 435 aa16.47■□□□□ 0.23
ATRIP-208ENST00000639561 SYT1P21579 422 aa16.46■□□□□ 0.23
ATRIP-208ENST00000639561 EPHX2P34913 555 aa16.46■□□□□ 0.23
ATRIP-208ENST00000639561 DNAJC5GQ8N7S2 189 aa16.46■□□□□ 0.23
ATRIP-208ENST00000639561 CNNM1Q9NRU3 951 aa16.46■□□□□ 0.23
ATRIP-208ENST00000639561 SMC3Q9UQE7 1217 aa16.46■□□□□ 0.23
ATRIP-208ENST00000639561 DUOX1Q9NRD9 1551 aa16.46■□□□□ 0.23
ATRIP-208ENST00000639561 RNF113AO15541 343 aaKnown RBP16.46■□□□□ 0.23
ATRIP-208ENST00000639561 KIAA2012Q0VF49 1180 aa16.46■□□□□ 0.23
ATRIP-208ENST00000639561 CCDC152Q4G0S7 254 aa16.46■□□□□ 0.23
ATRIP-208ENST00000639561 AKAP11Q9UKA4 1901 aa16.46■□□□□ 0.23
ATRIP-208ENST00000639561 TCHHQ07283 1943 aa16.46■□□□□ 0.22
ATRIP-208ENST00000639561 CELF1Q92879 486 aaKnown RBP16.45■□□□□ 0.22
ATRIP-208ENST00000639561 KLRG1Q96E93 195 aa16.45■□□□□ 0.22
ATRIP-208ENST00000639561 ALDH8A1Q9H2A2 487 aaPredicted RBP16.45■□□□□ 0.22
ATRIP-208ENST00000639561 ZNRF3Q9ULT6 936 aa16.45■□□□□ 0.22
ATRIP-208ENST00000639561 GJB2P29033 226 aa16.45■□□□□ 0.22
ATRIP-208ENST00000639561 ZAP70P43403 619 aa16.45■□□□□ 0.22
ATRIP-208ENST00000639561 KRT32Q14532 448 aa16.45■□□□□ 0.22
ATRIP-208ENST00000639561 FOXD4L6Q3SYB3 417 aaPredicted RBP16.45■□□□□ 0.22
ATRIP-208ENST00000639561 EAPPQ56P03 285 aaPredicted RBP16.45■□□□□ 0.22
ATRIP-208ENST00000639561 FOXD4L3Q6VB84 417 aaPredicted RBP16.45■□□□□ 0.22
ATRIP-208ENST00000639561 OSBP2Q969R2 916 aa16.45■□□□□ 0.22
ATRIP-208ENST00000639561 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
ATRIP-208ENST00000639561 M0R2C6 588 aa16.44■□□□□ 0.22
ATRIP-208ENST00000639561 STX6O43752 255 aa16.44■□□□□ 0.22
ATRIP-208ENST00000639561 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
ATRIP-208ENST00000639561 STOX1Q6ZVD7 989 aa16.44■□□□□ 0.22
ATRIP-208ENST00000639561 NEK1Q96PY6 1258 aa16.44■□□□□ 0.22
ATRIP-208ENST00000639561 DSCC1Q9BVC3 393 aa16.44■□□□□ 0.22
ATRIP-208ENST00000639561 PANK2Q9BZ23 570 aa16.44■□□□□ 0.22
ATRIP-208ENST00000639561 POTEIP0CG38 1075 aa16.44■□□□□ 0.22
ATRIP-208ENST00000639561 POTEJP0CG39 1038 aa16.44■□□□□ 0.22
ATRIP-208ENST00000639561 HSPD1P10809 573 aaKnown RBP16.44■□□□□ 0.22
ATRIP-208ENST00000639561 CAVIN1Q6NZI2 390 aaKnown RBP16.44■□□□□ 0.22
ATRIP-208ENST00000639561 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
ATRIP-208ENST00000639561 LAMA4Q16363 1823 aa16.43■□□□□ 0.22
ATRIP-208ENST00000639561 PDE8BO95263 885 aa16.43■□□□□ 0.22
ATRIP-208ENST00000639561 ZSCAN22P10073 491 aaPredicted RBP16.43■□□□□ 0.22
ATRIP-208ENST00000639561 MCAMP43121 646 aa16.43■□□□□ 0.22
ATRIP-208ENST00000639561 ANKRD1Q15327 319 aa16.43■□□□□ 0.22
ATRIP-208ENST00000639561 ISY1Q9ULR0 285 aaKnown RBP16.43■□□□□ 0.22
ATRIP-208ENST00000639561 NCLP19338 710 aaKnown RBP16.43■□□□□ 0.22
ATRIP-208ENST00000639561 MRE11P49959 708 aa16.43■□□□□ 0.22
ATRIP-208ENST00000639561 HTRA3P83110 453 aa16.43■□□□□ 0.22
ATRIP-208ENST00000639561 EYA3Q99504 573 aa16.43■□□□□ 0.22
ATRIP-208ENST00000639561 GRPEL1Q9HAV7 217 aa16.43■□□□□ 0.22
ATRIP-208ENST00000639561 CLEC11AQ9Y240 323 aa16.43■□□□□ 0.22
ATRIP-208ENST00000639561 MYH7P12883 1935 aa16.42■□□□□ 0.22
ATRIP-208ENST00000639561 COL4A1P02462 1669 aa16.42■□□□□ 0.22
ATRIP-208ENST00000639561 FOXP2O15409 715 aa16.42■□□□□ 0.22
ATRIP-208ENST00000639561 CEP350Q5VT06 3117 aa16.42■□□□□ 0.22
ATRIP-208ENST00000639561 TNIP1Q15025 636 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms