RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 ZNF384Q8TF68 577 aa18.19■□□□□ 0.5
SPIN3-219ENST00000639053 SALL1Q9NSC2 1324 aa18.19■□□□□ 0.5
SPIN3-219ENST00000639053 BRCA1P38398 1863 aaKnown RBP18.19■□□□□ 0.5
SPIN3-219ENST00000639053 CYP7A1P22680 504 aa18.19■□□□□ 0.5
SPIN3-219ENST00000639053 VPS53Q5VIR6 699 aa18.19■□□□□ 0.5
SPIN3-219ENST00000639053 MAP4K1Q92918 833 aa18.19■□□□□ 0.5
SPIN3-219ENST00000639053 DBNDD1Q9H9R9 158 aa18.19■□□□□ 0.5
SPIN3-219ENST00000639053 PALD1Q9ULE6 856 aa18.19■□□□□ 0.5
SPIN3-219ENST00000639053 FAM205AQ6ZU69 1335 aa18.19■□□□□ 0.5
SPIN3-219ENST00000639053 MCM4P33991 863 aa18.18■□□□□ 0.5
SPIN3-219ENST00000639053 HSPA4P34932 840 aa18.18■□□□□ 0.5
SPIN3-219ENST00000639053 GTF2IP78347 998 aa18.18■□□□□ 0.5
SPIN3-219ENST00000639053 MECOMQ03112 1051 aa18.18■□□□□ 0.5
SPIN3-219ENST00000639053 SOGA3Q5TF21 947 aa18.18■□□□□ 0.5
SPIN3-219ENST00000639053 RBM8AQ9Y5S9 174 aaKnown RBP18.18■□□□□ 0.5
SPIN3-219ENST00000639053 GPAA1O43292 621 aa18.17■□□□□ 0.5
SPIN3-219ENST00000639053 KIAA2012Q0VF49 1180 aa18.17■□□□□ 0.5
SPIN3-219ENST00000639053 RAB3GAP1Q15042 981 aa18.17■□□□□ 0.5
SPIN3-219ENST00000639053 SPTY2D1Q68D10 685 aaPredicted RBP18.17■□□□□ 0.5
SPIN3-219ENST00000639053 ADGRA1Q86SQ6 560 aa18.17■□□□□ 0.5
SPIN3-219ENST00000639053 ZGPATQ8N5A5 531 aaKnown RBP18.17■□□□□ 0.5
SPIN3-219ENST00000639053 FBXW7Q969H0 707 aa18.17■□□□□ 0.5
SPIN3-219ENST00000639053 NSUN4Q96CB9 384 aaKnown RBP18.17■□□□□ 0.5
SPIN3-219ENST00000639053 PSMD1Q99460 953 aa18.17■□□□□ 0.5
SPIN3-219ENST00000639053 BCS1LQ9Y276 419 aa18.17■□□□□ 0.5
SPIN3-219ENST00000639053 PPIP5K2O43314 1243 aa18.17■□□□□ 0.5
SPIN3-219ENST00000639053 NAA16Q6N069 864 aaPredicted RBP18.17■□□□□ 0.5
SPIN3-219ENST00000639053 CHD4Q14839 1912 aa18.16■□□□□ 0.5
SPIN3-219ENST00000639053 DDX11L8A8MPP1 907 aa18.16■□□□□ 0.5
SPIN3-219ENST00000639053 ECE2O60344 883 aa18.16■□□□□ 0.5
SPIN3-219ENST00000639053 LDHBP07195 334 aaKnown RBP18.16■□□□□ 0.5
SPIN3-219ENST00000639053 MIGA1Q8NAN2 632 aa18.16■□□□□ 0.5
SPIN3-219ENST00000639053 FHDC1Q9C0D6 1143 aaPredicted RBP18.16■□□□□ 0.5
SPIN3-219ENST00000639053 CWC22Q9HCG8 908 aaKnown RBP18.16■□□□□ 0.5
SPIN3-219ENST00000639053 KCNQ5Q9NR82 932 aa18.16■□□□□ 0.5
SPIN3-219ENST00000639053 ZNF277Q9NRM2 450 aaPredicted RBP18.16■□□□□ 0.5
SPIN3-219ENST00000639053 FOXP2O15409 715 aa18.15■□□□□ 0.5
SPIN3-219ENST00000639053 MBD4O95243 580 aa18.15■□□□□ 0.5
SPIN3-219ENST00000639053 HSPD1P10809 573 aaKnown RBP18.15■□□□□ 0.5
SPIN3-219ENST00000639053 PTMSP20962 102 aa18.15■□□□□ 0.5
SPIN3-219ENST00000639053 NECTIN1Q15223 517 aa18.15■□□□□ 0.5
SPIN3-219ENST00000639053 MFSD14BQ5SR56 506 aa18.15■□□□□ 0.5
SPIN3-219ENST00000639053 PODNQ7Z5L7 613 aa18.15■□□□□ 0.5
SPIN3-219ENST00000639053 DZIP1Q86YF9 867 aaKnown RBP18.15■□□□□ 0.5
SPIN3-219ENST00000639053 AIDAQ96BJ3 306 aa18.15■□□□□ 0.5
SPIN3-219ENST00000639053 DSCC1Q9BVC3 393 aa18.15■□□□□ 0.5
SPIN3-219ENST00000639053 ARMT1Q9H993 441 aa18.15■□□□□ 0.5
SPIN3-219ENST00000639053 TTLL5Q6EMB2 1281 aa18.14■□□□□ 0.5
SPIN3-219ENST00000639053 TBC1D22AQ8WUA7 517 aa18.14■□□□□ 0.5
SPIN3-219ENST00000639053 STRBPQ96SI9 672 aaKnown RBP18.14■□□□□ 0.5
SPIN3-219ENST00000639053 MXD3Q9BW11 206 aa18.14■□□□□ 0.5
SPIN3-219ENST00000639053 MAST2Q6P0Q8 1798 aa18.14■□□□□ 0.49
SPIN3-219ENST00000639053 CREB3L3Q68CJ9 461 aa18.14■□□□□ 0.49
SPIN3-219ENST00000639053 RASEFQ8IZ41 740 aa18.14■□□□□ 0.49
SPIN3-219ENST00000639053 LCORLQ8N3X6 602 aa18.14■□□□□ 0.49
SPIN3-219ENST00000639053 GBP4Q96PP9 640 aa18.14■□□□□ 0.49
SPIN3-219ENST00000639053 SNX14Q9Y5W7 946 aa18.14■□□□□ 0.49
SPIN3-219ENST00000639053 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
SPIN3-219ENST00000639053 SLC27A2O14975 620 aa18.13■□□□□ 0.49
SPIN3-219ENST00000639053 CERS5Q8N5B7 392 aa18.13■□□□□ 0.49
SPIN3-219ENST00000639053 MAGEB6P1A0A0J9YX57 407 aa18.12■□□□□ 0.49
SPIN3-219ENST00000639053 NFKBIEO00221 500 aa18.12■□□□□ 0.49
SPIN3-219ENST00000639053 DYNLL1P63167 89 aaKnown RBP18.12■□□□□ 0.49
SPIN3-219ENST00000639053 NUCB2P80303 420 aa18.12■□□□□ 0.49
SPIN3-219ENST00000639053 CLEC17AQ6ZS10 378 aa18.12■□□□□ 0.49
SPIN3-219ENST00000639053 LARGE2Q8N3Y3 721 aa18.12■□□□□ 0.49
SPIN3-219ENST00000639053 KCNB2Q92953 911 aa18.12■□□□□ 0.49
SPIN3-219ENST00000639053 COL4A5P29400 1685 aa18.12■□□□□ 0.49
SPIN3-219ENST00000639053 YDJCA8MPS7 323 aa18.12■□□□□ 0.49
SPIN3-219ENST00000639053 DIXDC1Q155Q3 683 aa18.12■□□□□ 0.49
SPIN3-219ENST00000639053 TNPO1Q92973 898 aaKnown RBP18.12■□□□□ 0.49
SPIN3-219ENST00000639053 RIOK1Q9BRS2 568 aaKnown RBP18.12■□□□□ 0.49
SPIN3-219ENST00000639053 TAF6LQ9Y6J9 622 aa18.12■□□□□ 0.49
SPIN3-219ENST00000639053 PRKAB2O43741 272 aa18.11■□□□□ 0.49
SPIN3-219ENST00000639053 IGSF3O75054 1194 aa18.11■□□□□ 0.49
SPIN3-219ENST00000639053 NEK4P51957 841 aa18.11■□□□□ 0.49
SPIN3-219ENST00000639053 TAOK3Q9H2K8 898 aa18.11■□□□□ 0.49
SPIN3-219ENST00000639053 FER1L6Q2WGJ9 1857 aa18.1■□□□□ 0.49
SPIN3-219ENST00000639053 CCDC88AQ3V6T2 1871 aa18.1■□□□□ 0.49
SPIN3-219ENST00000639053 IARSP41252 1262 aaKnown RBP18.1■□□□□ 0.49
SPIN3-219ENST00000639053 GSTO1P78417 241 aa18.1■□□□□ 0.49
SPIN3-219ENST00000639053 DACT2Q5SW24 774 aa18.1■□□□□ 0.49
SPIN3-219ENST00000639053 STRIP1Q5VSL9 837 aa18.1■□□□□ 0.49
SPIN3-219ENST00000639053 TMED8Q6PL24 325 aaPredicted RBP18.1■□□□□ 0.49
SPIN3-219ENST00000639053 VPS33BQ9H267 617 aa18.1■□□□□ 0.49
SPIN3-219ENST00000639053 SCN9AQ15858 1988 aa18.1■□□□□ 0.49
SPIN3-219ENST00000639053 USP17L3A6NCW0 530 aa18.09■□□□□ 0.49
SPIN3-219ENST00000639053 USP17L4A6NCW7 530 aa18.09■□□□□ 0.49
SPIN3-219ENST00000639053 F8W031 263 aaPredicted RBP18.09■□□□□ 0.49
SPIN3-219ENST00000639053 FGAP02671 866 aa18.09■□□□□ 0.49
SPIN3-219ENST00000639053 APPP05067 770 aa18.09■□□□□ 0.49
SPIN3-219ENST00000639053 USP17L1Q7RTZ2 530 aa18.09■□□□□ 0.49
SPIN3-219ENST00000639053 AATFQ9NY61 560 aaKnown RBP eCLIP18.09■□□□□ 0.49
SPIN3-219ENST00000639053 SLC4A4Q9Y6R1 1079 aa18.09■□□□□ 0.49
SPIN3-219ENST00000639053 GSG1L2A8MUP6 293 aa18.09■□□□□ 0.49
SPIN3-219ENST00000639053 PATL2C9JE40 543 aaKnown RBP18.09■□□□□ 0.49
SPIN3-219ENST00000639053 LDHCP07864 332 aa18.09■□□□□ 0.49
SPIN3-219ENST00000639053 RASSF7Q02833 373 aa18.09■□□□□ 0.49
SPIN3-219ENST00000639053 RNF20Q5VTR2 975 aa18.09■□□□□ 0.49
SPIN3-219ENST00000639053 SYT17Q9BSW7 474 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms