RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 STX6O43752 255 aa8.22□□□□□ -1.09
NECAP1-213ENST00000638883 GSDMDP57764 484 aa8.22□□□□□ -1.09
NECAP1-213ENST00000638883 KRT85P78386 507 aa8.22□□□□□ -1.09
NECAP1-213ENST00000638883 FLIIQ13045 1269 aa8.22□□□□□ -1.09
NECAP1-213ENST00000638883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.22□□□□□ -1.09
NECAP1-213ENST00000638883 SMARCC1Q92922 1105 aaPredicted RBP8.22□□□□□ -1.09
NECAP1-213ENST00000638883 ERCC3P19447 782 aa8.21□□□□□ -1.09
NECAP1-213ENST00000638883 GSCP56915 257 aaPredicted RBP8.21□□□□□ -1.09
NECAP1-213ENST00000638883 ARID5BQ14865 1188 aa8.21□□□□□ -1.09
NECAP1-213ENST00000638883 RBBP5Q15291 538 aaKnown RBP8.21□□□□□ -1.09
NECAP1-213ENST00000638883 FMNL2Q96PY5 1086 aa8.21□□□□□ -1.09
NECAP1-213ENST00000638883 CDK19Q9BWU1 502 aa8.21□□□□□ -1.09
NECAP1-213ENST00000638883 NAT10Q9H0A0 1025 aaKnown RBP8.21□□□□□ -1.09
NECAP1-213ENST00000638883 PDE11AQ9HCR9 933 aa8.21□□□□□ -1.09
NECAP1-213ENST00000638883 ZBTB40Q9NUA8 1239 aa8.21□□□□□ -1.09
NECAP1-213ENST00000638883 MYO5AQ9Y4I1 1855 aaKnown RBP8.21□□□□□ -1.1
NECAP1-213ENST00000638883 ATF3P18847 181 aa8.21□□□□□ -1.1
NECAP1-213ENST00000638883 ELF1P32519 619 aa8.21□□□□□ -1.1
NECAP1-213ENST00000638883 NAP1L1P55209 391 aaKnown RBP8.21□□□□□ -1.1
NECAP1-213ENST00000638883 DNM1Q05193 864 aaKnown RBP8.21□□□□□ -1.1
NECAP1-213ENST00000638883 JMYQ8N9B5 988 aa8.21□□□□□ -1.1
NECAP1-213ENST00000638883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.21□□□□□ -1.1
NECAP1-213ENST00000638883 HEG1Q9ULI3 1381 aa8.21□□□□□ -1.1
NECAP1-213ENST00000638883 SOCS7O14512 581 aa8.21□□□□□ -1.1
NECAP1-213ENST00000638883 EN1Q05925 392 aaPredicted RBP8.21□□□□□ -1.1
NECAP1-213ENST00000638883 CCDC158Q5M9N0 1113 aa8.21□□□□□ -1.1
NECAP1-213ENST00000638883 INTS4Q96HW7 963 aaKnown RBP8.21□□□□□ -1.1
NECAP1-213ENST00000638883 PCNTO95613 3336 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 IRF5Q13568 498 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 FBXW10Q5XX13 1052 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 NFATC2IPQ8NCF5 419 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 PROCA1Q8NCQ7 364 aaPredicted RBP8.2□□□□□ -1.1
NECAP1-213ENST00000638883 DACT1Q9NYF0 836 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 PSD3Q9NYI0 1048 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 EZRP15311 586 aaKnown RBP8.2□□□□□ -1.1
NECAP1-213ENST00000638883 HNRNPH1P31943 449 aaKnown RBP8.2□□□□□ -1.1
NECAP1-213ENST00000638883 ZKSCAN8Q15776 578 aaPredicted RBP8.2□□□□□ -1.1
NECAP1-213ENST00000638883 FOXR1Q6PIV2 292 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 HDXQ7Z353 690 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 FERMT3Q86UX7 667 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 TSPYL6Q8N831 410 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 EPC1Q9H2F5 836 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 FAM53CQ9NYF3 392 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 FAN1Q9Y2M0 1017 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 CAPN7Q9Y6W3 813 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 NPHP4O75161 1426 aaPredicted RBP8.2□□□□□ -1.1
NECAP1-213ENST00000638883 NSD2O96028 1365 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 EFCAB8A8MWE9 144 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 CAND2O75155 1236 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 HMOX1P09601 288 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 ATP2B2Q01814 1243 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 CC2D1AQ6P1N0 951 aaPredicted RBP8.2□□□□□ -1.1
NECAP1-213ENST00000638883 GPR161Q8N6U8 529 aaKnown RBP8.2□□□□□ -1.1
NECAP1-213ENST00000638883 STK31Q9BXU1 1019 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 NBPF3Q9H094 633 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 ATG3Q9NT62 314 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 FAM217BQ9NTX9 383 aaPredicted RBP8.2□□□□□ -1.1
NECAP1-213ENST00000638883 ANKRD31Q8N7Z5 1873 aa8.2□□□□□ -1.1
NECAP1-213ENST00000638883 C3orf80F5H4A9 247 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 ELL2O00472 640 aaPredicted RBP8.19□□□□□ -1.1
NECAP1-213ENST00000638883 PPFIA4O75335 1185 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 TUBB4AP04350 444 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 PAX7P23759 505 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 PSMD2Q13200 908 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 LRRFIP1Q32MZ4 808 aaKnown RBP8.19□□□□□ -1.1
NECAP1-213ENST00000638883 CCDC144BQ3MJ40 725 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 TTC22Q5TAA0 569 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 CCDC144CPQ8IYA2 1237 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 OTUD6BQ8N6M0 293 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 CNNM3Q8NE01 707 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 RABEP2Q9H5N1 569 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 OVOS2A0A0G2JMS6 1433 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 SDSP20132 328 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 GNG11P61952 73 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 LONRF2Q1L5Z9 754 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 KIAA1328Q86T90 577 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 TXNDC2Q86VQ3 553 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 TEX11Q8IYF3 940 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 CABS1Q96KC9 395 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 BICC1Q9H694 974 aaKnown RBP8.19□□□□□ -1.1
NECAP1-213ENST00000638883 HMGB1P09429 215 aaKnown RBP8.19□□□□□ -1.1
NECAP1-213ENST00000638883 PPP2R3AQ06190 1150 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 RNF187Q5TA31 235 aaPredicted RBP8.19□□□□□ -1.1
NECAP1-213ENST00000638883 TMC6Q7Z403 805 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 ARMC2Q8NEN0 867 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 MYO6Q9UM54 1294 aa8.19□□□□□ -1.1
NECAP1-213ENST00000638883 F13A1P00488 732 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 CT47B1P0C2W7 299 aaPredicted RBP8.18□□□□□ -1.1
NECAP1-213ENST00000638883 CSB-PGBD3P0DP91 1061 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 ANKLE2Q86XL3 938 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 GOLGA1Q92805 767 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 SH3GL3Q99963 347 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 LRRCC1Q9C099 1032 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 C1orf167Q5SNV9 1468 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 CCDC189A1A4V9 331 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 CCT5P48643 541 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 ETF1P62495 437 aaKnown RBP8.18□□□□□ -1.1
NECAP1-213ENST00000638883 SF3B2Q13435 895 aaKnown RBP8.18□□□□□ -1.1
NECAP1-213ENST00000638883 RPUSD2Q8IZ73 545 aaKnown RBP8.18□□□□□ -1.1
NECAP1-213ENST00000638883 THEMISQ8N1K5 641 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms