RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 CDC14CA4D256 554 aa8.29□□□□□ -1.08
SCARB2-206ENST00000638175 DIAPH1O60610 1272 aaKnown RBP8.29□□□□□ -1.08
SCARB2-206ENST00000638175 PRMT3O60678 531 aa8.29□□□□□ -1.08
SCARB2-206ENST00000638175 IL13P35225 146 aa8.29□□□□□ -1.08
SCARB2-206ENST00000638175 SMTNP53814 917 aa8.29□□□□□ -1.08
SCARB2-206ENST00000638175 PDE3BQ13370 1112 aa8.29□□□□□ -1.08
SCARB2-206ENST00000638175 CNGB1Q14028 1251 aaPredicted RBP8.29□□□□□ -1.08
SCARB2-206ENST00000638175 CNKSR1Q969H4 720 aa8.29□□□□□ -1.08
SCARB2-206ENST00000638175 FHDC1Q9C0D6 1143 aaPredicted RBP8.29□□□□□ -1.08
SCARB2-206ENST00000638175 PRKRIP1Q9H875 184 aaPredicted RBP8.29□□□□□ -1.08
SCARB2-206ENST00000638175 SCHIP1Q9P0W5 487 aaPredicted RBP8.29□□□□□ -1.08
SCARB2-206ENST00000638175 SIPA1L3O60292 1781 aaPredicted RBP8.29□□□□□ -1.08
SCARB2-206ENST00000638175 A6NJY4 79 aa8.28□□□□□ -1.08
SCARB2-206ENST00000638175 EXOC5O00471 708 aa8.28□□□□□ -1.08
SCARB2-206ENST00000638175 TATP17735 454 aaPredicted RBP8.28□□□□□ -1.08
SCARB2-206ENST00000638175 SV2AQ7L0J3 742 aa8.28□□□□□ -1.08
SCARB2-206ENST00000638175 TNS4Q8IZW8 715 aa8.28□□□□□ -1.08
SCARB2-206ENST00000638175 STAG2Q8N3U4 1231 aa8.28□□□□□ -1.08
SCARB2-206ENST00000638175 WHAMMQ8TF30 809 aa8.28□□□□□ -1.08
SCARB2-206ENST00000638175 COL26A1Q96A83 441 aa8.28□□□□□ -1.08
SCARB2-206ENST00000638175 HINFPQ9BQA5 517 aa8.28□□□□□ -1.08
SCARB2-206ENST00000638175 CUEDC1Q9NWM3 386 aaPredicted RBP8.28□□□□□ -1.08
SCARB2-206ENST00000638175 SERTAD1Q9UHV2 236 aa8.28□□□□□ -1.08
SCARB2-206ENST00000638175 IQSEC3Q9UPP2 1182 aaPredicted RBP8.28□□□□□ -1.08
SCARB2-206ENST00000638175 PCDH11XQ9BZA7 1347 aa8.28□□□□□ -1.08
SCARB2-206ENST00000638175 PCDH11YQ9BZA8 1340 aa8.28□□□□□ -1.08
SCARB2-206ENST00000638175 TAF1LQ8IZX4 1826 aa8.27□□□□□ -1.09
SCARB2-206ENST00000638175 NUP188Q5SRE5 1749 aa8.27□□□□□ -1.09
SCARB2-206ENST00000638175 C21orf2O43822 256 aa8.27□□□□□ -1.09
SCARB2-206ENST00000638175 KCNMA1Q12791 1236 aa8.27□□□□□ -1.09
SCARB2-206ENST00000638175 ZNF385CQ66K41 422 aaPredicted RBP8.27□□□□□ -1.09
SCARB2-206ENST00000638175 ZNF295-AS1Q8N0V1 137 aa8.27□□□□□ -1.09
SCARB2-206ENST00000638175 USHBP1Q8N6Y0 703 aa8.27□□□□□ -1.09
SCARB2-206ENST00000638175 PRIMPOLQ96LW4 560 aa8.27□□□□□ -1.09
SCARB2-206ENST00000638175 TSPAN10Q9H1Z9 355 aaPredicted RBP8.27□□□□□ -1.09
SCARB2-206ENST00000638175 ADAMTS8Q9UP79 889 aa8.27□□□□□ -1.09
SCARB2-206ENST00000638175 NUDCQ9Y266 331 aa8.27□□□□□ -1.09
SCARB2-206ENST00000638175 IVNS1ABPQ9Y6Y0 642 aa8.27□□□□□ -1.09
SCARB2-206ENST00000638175 PAPPAQ13219 1627 aa8.26□□□□□ -1.09
SCARB2-206ENST00000638175 CDK2AP1O14519 115 aa8.26□□□□□ -1.09
SCARB2-206ENST00000638175 ARID4AP29374 1257 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-206ENST00000638175 GPC1P35052 558 aa8.26□□□□□ -1.09
SCARB2-206ENST00000638175 FKBP5Q13451 457 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-206ENST00000638175 FAM196AQ6ZSG2 479 aa8.26□□□□□ -1.09
SCARB2-206ENST00000638175 LYSMD3Q7Z3D4 306 aa8.26□□□□□ -1.09
SCARB2-206ENST00000638175 PRICKLE2Q7Z3G6 844 aa8.26□□□□□ -1.09
SCARB2-206ENST00000638175 PODXL2Q9NZ53 605 aa8.26□□□□□ -1.09
SCARB2-206ENST00000638175 ZNF831Q5JPB2 1677 aa8.26□□□□□ -1.09
SCARB2-206ENST00000638175 ANP32CO43423 234 aa8.25□□□□□ -1.09
SCARB2-206ENST00000638175 SLURP2P0DP57 97 aa8.25□□□□□ -1.09
SCARB2-206ENST00000638175 RHOQP17081 205 aa8.25□□□□□ -1.09
SCARB2-206ENST00000638175 RNF144AP50876 292 aaPredicted RBP8.25□□□□□ -1.09
SCARB2-206ENST00000638175 TLR1Q15399 786 aa8.25□□□□□ -1.09
SCARB2-206ENST00000638175 AMOTQ4VCS5 1084 aa8.25□□□□□ -1.09
SCARB2-206ENST00000638175 SULT6B1Q6IMI4 303 aa8.25□□□□□ -1.09
SCARB2-206ENST00000638175 ZCRB1Q8TBF4 217 aaKnown RBP8.25□□□□□ -1.09
SCARB2-206ENST00000638175 SPG7Q9UQ90 795 aa8.25□□□□□ -1.09
SCARB2-206ENST00000638175 QSER1Q2KHR3 1735 aa8.25□□□□□ -1.09
SCARB2-206ENST00000638175 CICQ96RK0 1608 aaPredicted RBP8.25□□□□□ -1.09
SCARB2-206ENST00000638175 UBR2Q8IWV8 1755 aa8.25□□□□□ -1.09
SCARB2-206ENST00000638175 C5P01031 1676 aa8.24□□□□□ -1.09
SCARB2-206ENST00000638175 U2SURPO15042 1029 aaKnown RBP8.24□□□□□ -1.09
SCARB2-206ENST00000638175 LGR5O75473 907 aa8.24□□□□□ -1.09
SCARB2-206ENST00000638175 CENPCQ03188 943 aa8.24□□□□□ -1.09
SCARB2-206ENST00000638175 SLC9A9Q8IVB4 645 aa8.24□□□□□ -1.09
SCARB2-206ENST00000638175 NBPF15Q8N660 670 aa8.24□□□□□ -1.09
SCARB2-206ENST00000638175 MARCH10Q8NA82 808 aaPredicted RBP8.24□□□□□ -1.09
SCARB2-206ENST00000638175 SCG3Q8WXD2 468 aaKnown RBP8.24□□□□□ -1.09
SCARB2-206ENST00000638175 USP3Q9Y6I4 520 aa8.24□□□□□ -1.09
SCARB2-206ENST00000638175 MRC1P22897 1456 aa8.24□□□□□ -1.09
SCARB2-206ENST00000638175 PTCD1O75127 700 aaKnown RBP8.23□□□□□ -1.09
SCARB2-206ENST00000638175 HIRAP54198 1017 aaPredicted RBP8.23□□□□□ -1.09
SCARB2-206ENST00000638175 PSMA6P60900 246 aaKnown RBP8.23□□□□□ -1.09
SCARB2-206ENST00000638175 PLEKHO1Q53GL0 409 aaPredicted RBP8.23□□□□□ -1.09
SCARB2-206ENST00000638175 GRIP2Q9C0E4 1043 aa8.23□□□□□ -1.09
SCARB2-206ENST00000638175 MTMR7Q9Y216 660 aa8.23□□□□□ -1.09
SCARB2-206ENST00000638175 COL5A3P25940 1745 aaPredicted RBP8.23□□□□□ -1.09
SCARB2-206ENST00000638175 MEN1O00255 615 aa8.22□□□□□ -1.09
SCARB2-206ENST00000638175 HSP90AB1P08238 724 aaKnown RBP8.22□□□□□ -1.09
SCARB2-206ENST00000638175 HMOX1P09601 288 aa8.22□□□□□ -1.09
SCARB2-206ENST00000638175 U2AF1L5P0DN76 240 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-206ENST00000638175 U2AF1Q01081 240 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCARB2-206ENST00000638175 SF3B2Q13435 895 aaKnown RBP8.22□□□□□ -1.09
SCARB2-206ENST00000638175 GAS6Q14393 721 aa8.22□□□□□ -1.09
SCARB2-206ENST00000638175 TEAD4Q15561 434 aa8.22□□□□□ -1.09
SCARB2-206ENST00000638175 IFNL2Q8IZJ0 200 aa8.22□□□□□ -1.09
SCARB2-206ENST00000638175 SVOPQ8N4V2 548 aa8.22□□□□□ -1.09
SCARB2-206ENST00000638175 DDX54Q8TDD1 881 aaKnown RBP8.22□□□□□ -1.09
SCARB2-206ENST00000638175 NLRP3Q96P20 1036 aa8.22□□□□□ -1.09
SCARB2-206ENST00000638175 C2orf49Q9BVC5 232 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-206ENST00000638175 GZF1Q9H116 711 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-206ENST00000638175 PNNQ9H307 717 aaKnown RBP8.22□□□□□ -1.09
SCARB2-206ENST00000638175 EGFL7Q9UHF1 273 aa8.22□□□□□ -1.09
SCARB2-206ENST00000638175 KDM3BQ7LBC6 1761 aa8.22□□□□□ -1.09
SCARB2-206ENST00000638175 TUBGCP6Q96RT7 1819 aa8.22□□□□□ -1.09
SCARB2-206ENST00000638175 LAMB4A4D0S4 1761 aa8.21□□□□□ -1.1
SCARB2-206ENST00000638175 CYP27B1O15528 508 aa8.21□□□□□ -1.1
SCARB2-206ENST00000638175 PPP1R12BO60237 982 aaPredicted RBP8.21□□□□□ -1.1
SCARB2-206ENST00000638175 ARHGEF15O94989 841 aa8.21□□□□□ -1.1
SCARB2-206ENST00000638175 NEFMP07197 916 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms