RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 USP48Q86UV5 1035 aa16.87■□□□□ 0.29
UBE3A-227ENST00000638011 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.87■□□□□ 0.29
UBE3A-227ENST00000638011 CAPN7Q9Y6W3 813 aa16.87■□□□□ 0.29
UBE3A-227ENST00000638011 EEF2P13639 858 aaKnown RBP16.87■□□□□ 0.29
UBE3A-227ENST00000638011 ATF3P18847 181 aa16.87■□□□□ 0.29
UBE3A-227ENST00000638011 FCHSD1Q86WN1 690 aa16.87■□□□□ 0.29
UBE3A-227ENST00000638011 TLDC2A0PJX2 215 aa16.87■□□□□ 0.29
UBE3A-227ENST00000638011 TMEM67Q5HYA8 995 aa16.87■□□□□ 0.29
UBE3A-227ENST00000638011 CASKIN1Q8WXD9 1431 aa16.87■□□□□ 0.29
UBE3A-227ENST00000638011 STK24Q9Y6E0 443 aa16.87■□□□□ 0.29
UBE3A-227ENST00000638011 PHBP35232 272 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 PRIM1P49642 420 aaKnown RBP16.86■□□□□ 0.29
UBE3A-227ENST00000638011 ZC3H6P61129 1189 aaKnown RBP16.86■□□□□ 0.29
UBE3A-227ENST00000638011 HDAC1Q13547 482 aaPredicted RBP16.86■□□□□ 0.29
UBE3A-227ENST00000638011 NFE2L2Q16236 605 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 HHATQ5VTY9 493 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 RIPOR2Q9Y4F9 1068 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 NSD2O96028 1365 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 PCYT1AP49585 367 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 RBM26Q5T8P6 1007 aaKnown RBP16.86■□□□□ 0.29
UBE3A-227ENST00000638011 SYT10Q6XYQ8 523 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 TIAM1Q13009 1591 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 TMTC1Q8IUR5 882 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 ORC3Q9UBD5 711 aaPredicted RBP16.86■□□□□ 0.29
UBE3A-227ENST00000638011 PTGS1P23219 599 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 OAS2P29728 719 aaKnown RBP16.86■□□□□ 0.29
UBE3A-227ENST00000638011 TSR2Q969E8 191 aaKnown RBP16.86■□□□□ 0.29
UBE3A-227ENST00000638011 PALM3A6NDB9 673 aaPredicted RBP16.86■□□□□ 0.29
UBE3A-227ENST00000638011 MYL5Q02045 173 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 CXorf38Q8TB03 319 aa16.86■□□□□ 0.29
UBE3A-227ENST00000638011 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
UBE3A-227ENST00000638011 BTBD11A6QL63 1104 aa16.85■□□□□ 0.29
UBE3A-227ENST00000638011 PEX19P40855 299 aa16.85■□□□□ 0.29
UBE3A-227ENST00000638011 SMC5Q8IY18 1101 aa16.85■□□□□ 0.29
UBE3A-227ENST00000638011 FBXO41Q8TF61 875 aa16.85■□□□□ 0.29
UBE3A-227ENST00000638011 FRMD4BQ9Y2L6 1034 aa16.85■□□□□ 0.29
UBE3A-227ENST00000638011 SPECC1L-ADORA2AF8WAN1 911 aa16.85■□□□□ 0.29
UBE3A-227ENST00000638011 SKIP12755 728 aa16.85■□□□□ 0.29
UBE3A-227ENST00000638011 SLC5A1P13866 664 aa16.85■□□□□ 0.29
UBE3A-227ENST00000638011 RBM5P52756 815 aaKnown RBP eCLIP16.85■□□□□ 0.29
UBE3A-227ENST00000638011 SYF2O95926 243 aaKnown RBP16.85■□□□□ 0.29
UBE3A-227ENST00000638011 F13A1P00488 732 aa16.85■□□□□ 0.29
UBE3A-227ENST00000638011 METTL24Q5JXM2 366 aa16.85■□□□□ 0.29
UBE3A-227ENST00000638011 POLR3DP05423 398 aaPredicted RBP16.84■□□□□ 0.29
UBE3A-227ENST00000638011 PHEXP78562 749 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 ABTB2Q8N961 1025 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 STARD3NLO95772 234 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 ANKRD20A4Q4UJ75 823 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 ANKRD20A8PQ5CZ79 823 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 ANKRD20A2Q5SQ80 823 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 ANKRD20A1Q5TYW2 823 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 SPTLC2O15270 562 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 TRIM68Q6AZZ1 485 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 TUBB6Q9BUF5 446 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 BAG3O95817 575 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
UBE3A-227ENST00000638011 RRP36Q96EU6 259 aaKnown RBP16.84■□□□□ 0.29
UBE3A-227ENST00000638011 USP16Q9Y5T5 823 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 NLRP6P59044 892 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 TTC22Q5TAA0 569 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 DACT1Q9NYF0 836 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 NCOA2Q15596 1464 aa16.84■□□□□ 0.29
UBE3A-227ENST00000638011 EXOC6BQ9Y2D4 811 aa16.83■□□□□ 0.29
UBE3A-227ENST00000638011 CABP4P57796 275 aa16.83■□□□□ 0.29
UBE3A-227ENST00000638011 NCBP1Q09161 790 aaKnown RBP16.83■□□□□ 0.29
UBE3A-227ENST00000638011 ECHDC1Q9NTX5 307 aa16.83■□□□□ 0.29
UBE3A-227ENST00000638011 MUM1L1Q5H9M0 696 aa16.83■□□□□ 0.28
UBE3A-227ENST00000638011 MINDY4BA8MYZ0 360 aa16.83■□□□□ 0.28
UBE3A-227ENST00000638011 CRACR2BQ8N4Y2 399 aaPredicted RBP16.83■□□□□ 0.28
UBE3A-227ENST00000638011 IQUBQ8NA54 791 aa16.83■□□□□ 0.28
UBE3A-227ENST00000638011 NLRP7Q8WX94 980 aa16.83■□□□□ 0.28
UBE3A-227ENST00000638011 PAWRQ96IZ0 340 aaKnown RBP16.83■□□□□ 0.28
UBE3A-227ENST00000638011 EFHD1Q9BUP0 239 aa16.83■□□□□ 0.28
UBE3A-227ENST00000638011 TMX3Q96JJ7 454 aa16.83■□□□□ 0.28
UBE3A-227ENST00000638011 TYW1Q9NV66 732 aaKnown RBP16.83■□□□□ 0.28
UBE3A-227ENST00000638011 DAAM1Q9Y4D1 1078 aa16.83■□□□□ 0.28
UBE3A-227ENST00000638011 MROH2BQ7Z745 1585 aa16.83■□□□□ 0.28
UBE3A-227ENST00000638011 FLOT1O75955 427 aa16.83■□□□□ 0.28
UBE3A-227ENST00000638011 ZFXP17010 805 aaPredicted RBP16.83■□□□□ 0.28
UBE3A-227ENST00000638011 TMEM87AQ8NBN3 555 aa16.83■□□□□ 0.28
UBE3A-227ENST00000638011 DTNBP1Q96EV8 351 aa16.83■□□□□ 0.28
UBE3A-227ENST00000638011 GNAT3A8MTJ3 354 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 EFCAB8A8MWE9 144 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 KLHL34Q8N239 644 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 RTL9Q8NET4 1388 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 RGS16O15492 202 aaPredicted RBP16.82■□□□□ 0.28
UBE3A-227ENST00000638011 SUN1O94901 812 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 DYNC1I2Q13409 638 aaKnown RBP16.82■□□□□ 0.28
UBE3A-227ENST00000638011 PODNQ7Z5L7 613 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 CCDC84Q86UT8 332 aaPredicted RBP16.82■□□□□ 0.28
UBE3A-227ENST00000638011 CCHCR1Q8TD31 782 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 RANBP6O60518 1105 aaKnown RBP16.82■□□□□ 0.28
UBE3A-227ENST00000638011 RARSP54136 660 aaKnown RBP16.82■□□□□ 0.28
UBE3A-227ENST00000638011 SMIM23A6NLE4 172 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 TTC19Q6DKK2 380 aaPredicted RBP16.82■□□□□ 0.28
UBE3A-227ENST00000638011 KAT14Q9H8E8 782 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 BAG5Q9UL15 447 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 EIF3DO15371 548 aaKnown RBP eCLIP16.82■□□□□ 0.28
UBE3A-227ENST00000638011 CALM1P0DP23 149 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms