RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 TTC22Q5TAA0 569 aa20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 MTMR3Q13615 1198 aa20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 GUCA1BQ9UMX6 200 aa20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 WHAMMP3Q1A5X7 153 aa20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 GOLGA8QA0A0J9YX86 632 aa20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 GOLGA8OA6NCC3 632 aa20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 GOLGA8NF8WBI6 632 aa20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 KIF11P52732 1056 aa20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 CNNM4Q6P4Q7 775 aa20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 ZNF804AQ7Z570 1209 aa20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 SPATS2Q86XZ4 545 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 NUP58Q9BVL2 599 aa20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 TBC1D32Q96NH3 1257 aa20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 SPTLC2O15270 562 aa20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 HMGB3O15347 200 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 ARID5AQ03989 594 aa20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 NSMCE1Q8WV22 266 aa20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 ZFP91Q96JP5 570 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-247ENST00000637769 TMEM110-MUSTN1A8MSY1 372 aa20.17■□□□□ 0.82
CACNA1A-247ENST00000637769 MCMDC2Q4G0Z9 681 aa20.17■□□□□ 0.82
CACNA1A-247ENST00000637769 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.17■□□□□ 0.82
CACNA1A-247ENST00000637769 THEGQ9P2T0 379 aa20.17■□□□□ 0.82
CACNA1A-247ENST00000637769 KCNG1Q9UIX4 513 aa20.17■□□□□ 0.82
CACNA1A-247ENST00000637769 ARHGEF2Q92974 986 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-247ENST00000637769 TTF2Q9UNY4 1162 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-247ENST00000637769 NUDT16Q96DE0 195 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-247ENST00000637769 ZMYND15Q9H091 742 aa20.17■□□□□ 0.82
CACNA1A-247ENST00000637769 RNF216Q9NWF9 866 aaPredicted RBP20.17■□□□□ 0.82
CACNA1A-247ENST00000637769 NDUFAB1O14561 156 aa20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 DKC1O60832 514 aaKnown RBP eCLIP20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 NPHP3Q7Z494 1330 aa20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 SH2D4AQ9H788 454 aa20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 AKR1B15C9JRZ8 316 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 MCM10Q7L590 875 aa20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 TSPYL2Q9H2G4 693 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 KLF18A0A0U1RQI7 1052 aa20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 VTI1AQ96AJ9 217 aa20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 INPP5BP32019 993 aa20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 CCT6AP40227 531 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 GIMAP6Q6P9H5 292 aa20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 AOPEPQ8N6M6 819 aa20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 CCDC8Q9H0W5 538 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-247ENST00000637769 TYRO3Q06418 890 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 ISM2Q6H9L7 571 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 CCDC122Q5T0U0 273 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 PPP4R1Q8TF05 950 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 ELP1O95163 1332 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 TROQ12816 1431 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 PPANQ9NQ55 473 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 C8orf74Q6P047 294 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 MAP3K2Q9Y2U5 619 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 RIOK3O14730 519 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 PLCD1P51178 756 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 BRDTQ58F21 947 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 CYP26C1Q6V0L0 522 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 LEO1Q8WVC0 666 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 P3H4Q92791 437 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 ZKSCAN3Q9BRR0 538 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 PANK2Q9BZ23 570 aa20.15■□□□□ 0.82
CACNA1A-247ENST00000637769 TTC16Q8NEE8 873 aa20.14■□□□□ 0.82
CACNA1A-247ENST00000637769 RPGRIP1Q96KN7 1286 aa20.14■□□□□ 0.82
CACNA1A-247ENST00000637769 CAPZA3Q96KX2 299 aa20.14■□□□□ 0.82
CACNA1A-247ENST00000637769 EXOC7Q9UPT5 735 aa20.14■□□□□ 0.82
CACNA1A-247ENST00000637769 NUCKS1Q9H1E3 243 aaKnown RBP20.14■□□□□ 0.82
CACNA1A-247ENST00000637769 CC2D2AQ9P2K1 1620 aa20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 WDR46O15213 610 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 MAIP1Q8WWC4 291 aa20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 NYXQ9GZU5 481 aa20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 IQGAP2Q13576 1575 aa20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 BAG1Q99933 345 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 UBE2Q2Q8WVN8 375 aa20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 ZNF644Q9H582 1327 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 SPOPO43791 374 aa20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 CALUO43852 315 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 LUC7L3O95232 432 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 HAUS3Q68CZ6 603 aa20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 FNBP1Q96RU3 617 aa20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 MPRIPQ6WCQ1 1025 aa20.14■□□□□ 0.81
CACNA1A-247ENST00000637769 SMARCA5O60264 1052 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-247ENST00000637769 RASA3Q14644 834 aa20.13■□□□□ 0.81
CACNA1A-247ENST00000637769 PPP1R12CQ9BZL4 782 aa20.13■□□□□ 0.81
CACNA1A-247ENST00000637769 ZNF569Q5MCW4 686 aa20.13■□□□□ 0.81
CACNA1A-247ENST00000637769 GJC1P36383 396 aa20.13■□□□□ 0.81
CACNA1A-247ENST00000637769 UBE3BQ7Z3V4 1068 aa20.13■□□□□ 0.81
CACNA1A-247ENST00000637769 TTC41PQ6P2S7 1318 aa20.13■□□□□ 0.81
CACNA1A-247ENST00000637769 DENND2CQ68D51 928 aa20.13■□□□□ 0.81
CACNA1A-247ENST00000637769 PPFIA3O75145 1194 aa20.13■□□□□ 0.81
CACNA1A-247ENST00000637769 RFC4P35249 363 aa20.13■□□□□ 0.81
CACNA1A-247ENST00000637769 ARHGAP4P98171 946 aa20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 PLCB4Q15147 1175 aa20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 RAB17Q9H0T7 212 aa20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 KRT3P12035 628 aa20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 INTS4Q96HW7 963 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 TLDC2A0PJX2 215 aa20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 UAP1Q16222 522 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 IMPACTQ9P2X3 320 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms