RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 WDR33Q9C0J8 1336 aaKnown RBP5.72□□□□□ -1.49
SCN8A-213ENST00000637540 PSME4Q14997 1843 aa5.71□□□□□ -1.49
SCN8A-213ENST00000637540 SCN9AQ15858 1988 aa5.71□□□□□ -1.49
SCN8A-213ENST00000637540 NAV1Q8NEY1 1877 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 PATL2C9JE40 543 aaKnown RBP5.71□□□□□ -1.5
SCN8A-213ENST00000637540 SEMA3EO15041 775 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 STX6O43752 255 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 HMGB1P09429 215 aaKnown RBP5.71□□□□□ -1.5
SCN8A-213ENST00000637540 FGRP09769 529 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 FDPSP14324 419 aaKnown RBP5.71□□□□□ -1.5
SCN8A-213ENST00000637540 PTMSP20962 102 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 PDIA3P30101 505 aaKnown RBP5.71□□□□□ -1.5
SCN8A-213ENST00000637540 GYG1P46976 350 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 SCRN1Q12765 414 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 GRAPQ13588 217 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 SKOR2Q2VWA4 1001 aaPredicted RBP5.71□□□□□ -1.5
SCN8A-213ENST00000637540 MCTP1Q6DN14 999 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 CYB5R4Q7L1T6 521 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 GAS2L3Q86XJ1 694 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 NSUN7Q8NE18 718 aaKnown RBP5.71□□□□□ -1.5
SCN8A-213ENST00000637540 TDRD7Q8NHU6 1098 aaKnown RBP5.71□□□□□ -1.5
SCN8A-213ENST00000637540 GRAPLQ8TC17 118 aaPredicted RBP5.71□□□□□ -1.5
SCN8A-213ENST00000637540 LRRC2Q9BYS8 371 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 ANKRD2Q9GZV1 360 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 CTNNA3Q9UI47 895 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 SMC3Q9UQE7 1217 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 SLX4Q8IY92 1834 aa5.71□□□□□ -1.5
SCN8A-213ENST00000637540 NID2Q14112 1375 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 KIF13BQ9NQT8 1826 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 PRKAB2O43741 272 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 JAK2O60674 1132 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 IGSF3O75054 1194 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 GADD45BO75293 160 aaPredicted RBP5.7□□□□□ -1.5
SCN8A-213ENST00000637540 IDH1O75874 414 aaKnown RBP5.7□□□□□ -1.5
SCN8A-213ENST00000637540 PHF14O94880 888 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 F13A1P00488 732 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 SERPINB2P05120 415 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 ADD1P35611 737 aaKnown RBP5.7□□□□□ -1.5
SCN8A-213ENST00000637540 APOBRQ0VD83 1088 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 MAP3K12Q12852 859 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 IMMTQ16891 758 aaKnown RBP5.7□□□□□ -1.5
SCN8A-213ENST00000637540 WASHC4Q2M389 1173 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 ZNF772Q68DY9 489 aaPredicted RBP5.7□□□□□ -1.5
SCN8A-213ENST00000637540 COL23A1Q86Y22 540 aaPredicted RBP5.7□□□□□ -1.5
SCN8A-213ENST00000637540 IFNL3Q8IZI9 196 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 LCORLQ8N3X6 602 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 MAGEB6Q8N7X4 407 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 IGDCC4Q8TDY8 1250 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 BRF1Q92994 677 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 NSUN4Q96CB9 384 aaKnown RBP5.7□□□□□ -1.5
SCN8A-213ENST00000637540 CRAMP1Q96RY5 1269 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 LLPHQ9BRT6 129 aaKnown RBP5.7□□□□□ -1.5
SCN8A-213ENST00000637540 ARMT1Q9H993 441 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 FAM217BQ9NTX9 383 aaPredicted RBP5.7□□□□□ -1.5
SCN8A-213ENST00000637540 PODXL2Q9NZ53 605 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 ANAPC4Q9UJX5 808 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 BRPF3Q9ULD4 1205 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 LEMD3Q9Y2U8 911 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 SNED1Q8TER0 1413 aa5.7□□□□□ -1.5
SCN8A-213ENST00000637540 BAZ2BQ9UIF8 2168 aaKnown RBP5.7□□□□□ -1.5
SCN8A-213ENST00000637540 SMIM22K7EJ46 135 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 MBD4O95243 580 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 PDIA4P13667 645 aaKnown RBP5.69□□□□□ -1.5
SCN8A-213ENST00000637540 CYP7A1P22680 504 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 HIBADHP31937 336 aaKnown RBP5.69□□□□□ -1.5
SCN8A-213ENST00000637540 ZNF445P59923 1031 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 HAND2P61296 217 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 RESTQ13127 1097 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 NTRK3Q16288 839 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 FOXD4L5Q5VV16 416 aaPredicted RBP5.69□□□□□ -1.5
SCN8A-213ENST00000637540 TMED8Q6PL24 325 aaPredicted RBP5.69□□□□□ -1.5
SCN8A-213ENST00000637540 CHST3Q7LGC8 479 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 SGMS1Q86VZ5 419 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 CNBD1Q8NA66 436 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 RGS22Q8NE09 1264 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 FOXD4L4Q8WXT5 416 aaPredicted RBP5.69□□□□□ -1.5
SCN8A-213ENST00000637540 SENP2Q9HC62 589 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 INCENPQ9NQS7 918 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 TMEM63CQ9P1W3 806 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 MKRN1Q9UHC7 482 aaKnown RBP5.69□□□□□ -1.5
SCN8A-213ENST00000637540 IQSEC3Q9UPP2 1182 aaPredicted RBP5.69□□□□□ -1.5
SCN8A-213ENST00000637540 MYH8P13535 1937 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 ADAMTSL1Q8N6G6 1762 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 NEDD4P46934 1319 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 SIPA1L1O43166 1804 aa5.69□□□□□ -1.5
SCN8A-213ENST00000637540 GREB1LQ9C091 1923 aaPredicted RBP5.68□□□□□ -1.5
SCN8A-213ENST00000637540 SH2B2O14492 632 aaPredicted RBP5.68□□□□□ -1.5
SCN8A-213ENST00000637540 ZNF213O14771 459 aa5.68□□□□□ -1.5
SCN8A-213ENST00000637540 PRC1O43663 620 aa5.68□□□□□ -1.5
SCN8A-213ENST00000637540 PRPF40AO75400 957 aaKnown RBP5.68□□□□□ -1.5
SCN8A-213ENST00000637540 XRCC6P12956 609 aaKnown RBP eCLIP5.68□□□□□ -1.5
SCN8A-213ENST00000637540 IL1R1P14778 569 aa5.68□□□□□ -1.5
SCN8A-213ENST00000637540 GNAT2P19087 354 aa5.68□□□□□ -1.5
SCN8A-213ENST00000637540 GTF2E1P29083 439 aaPredicted RBP5.68□□□□□ -1.5
SCN8A-213ENST00000637540 MCM5P33992 734 aa5.68□□□□□ -1.5
SCN8A-213ENST00000637540 DYNLL1P63167 89 aaKnown RBP5.68□□□□□ -1.5
SCN8A-213ENST00000637540 GPSM2P81274 684 aa5.68□□□□□ -1.5
SCN8A-213ENST00000637540 MECOMQ03112 1051 aa5.68□□□□□ -1.5
SCN8A-213ENST00000637540 GRIK5Q16478 980 aa5.68□□□□□ -1.5
SCN8A-213ENST00000637540 LARP1BQ659C4 914 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms