RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 DNM1Q05193 864 aaKnown RBP22.09■■□□□ 1.13
CLN5-219ENST00000637537 ZSCAN23Q3MJ62 389 aa22.09■■□□□ 1.13
CLN5-219ENST00000637537 NBPF3Q9H094 633 aa22.09■■□□□ 1.13
CLN5-219ENST00000637537 TMEM63CQ9P1W3 806 aa22.09■■□□□ 1.13
CLN5-219ENST00000637537 FAM173BQ6P4H8 233 aa22.08■■□□□ 1.13
CLN5-219ENST00000637537 STRBPQ96SI9 672 aaKnown RBP22.08■■□□□ 1.13
CLN5-219ENST00000637537 FIBPO43427 364 aa22.08■■□□□ 1.12
CLN5-219ENST00000637537 TRIM37O94972 964 aa22.08■■□□□ 1.12
CLN5-219ENST00000637537 MBD4O95243 580 aa22.08■■□□□ 1.12
CLN5-219ENST00000637537 ZNF445P59923 1031 aa22.08■■□□□ 1.12
CLN5-219ENST00000637537 RPS8P62241 208 aaKnown RBP22.08■■□□□ 1.12
CLN5-219ENST00000637537 ARMT1Q9H993 441 aa22.08■■□□□ 1.12
CLN5-219ENST00000637537 ABCF2Q9UG63 623 aa22.08■■□□□ 1.12
CLN5-219ENST00000637537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.07■■□□□ 1.12
CLN5-219ENST00000637537 ZNF500O60304 480 aaPredicted RBP22.07■■□□□ 1.12
CLN5-219ENST00000637537 AGXT2Q9BYV1 514 aa22.07■■□□□ 1.12
CLN5-219ENST00000637537 LRP2BPQ9P2M1 347 aa22.07■■□□□ 1.12
CLN5-219ENST00000637537 C4AP0C0L4 1744 aa22.07■■□□□ 1.12
CLN5-219ENST00000637537 RBM10P98175 930 aaKnown RBP22.07■■□□□ 1.12
CLN5-219ENST00000637537 NFIXQ14938 502 aa22.07■■□□□ 1.12
CLN5-219ENST00000637537 MIGA1Q8NAN2 632 aa22.07■■□□□ 1.12
CLN5-219ENST00000637537 RGL2O15211 777 aa22.06■■□□□ 1.12
CLN5-219ENST00000637537 TBC1D10CQ8IV04 446 aa22.06■■□□□ 1.12
CLN5-219ENST00000637537 INCENPQ9NQS7 918 aa22.06■■□□□ 1.12
CLN5-219ENST00000637537 PRKAB2O43741 272 aa22.06■■□□□ 1.12
CLN5-219ENST00000637537 PFKFB2O60825 505 aa22.06■■□□□ 1.12
CLN5-219ENST00000637537 NOL7Q9UMY1 257 aaKnown RBP22.06■■□□□ 1.12
CLN5-219ENST00000637537 PRC1O43663 620 aa22.05■■□□□ 1.12
CLN5-219ENST00000637537 UBE4AQ14139 1066 aa22.05■■□□□ 1.12
CLN5-219ENST00000637537 VPS37DQ86XT2 251 aa22.05■■□□□ 1.12
CLN5-219ENST00000637537 RAB11FIP4Q86YS3 637 aa22.05■■□□□ 1.12
CLN5-219ENST00000637537 MB21D2Q8IYB1 491 aaPredicted RBP22.05■■□□□ 1.12
CLN5-219ENST00000637537 COL24A1Q17RW2 1714 aa22.05■■□□□ 1.12
CLN5-219ENST00000637537 CTDNEP1O95476 244 aa22.05■■□□□ 1.12
CLN5-219ENST00000637537 PDIA3P30101 505 aaKnown RBP22.05■■□□□ 1.12
CLN5-219ENST00000637537 FOSBP53539 338 aa22.05■■□□□ 1.12
CLN5-219ENST00000637537 ANTXR2P58335 489 aa22.05■■□□□ 1.12
CLN5-219ENST00000637537 EPB41L4AQ9HCS5 686 aaPredicted RBP22.05■■□□□ 1.12
CLN5-219ENST00000637537 A0A1B0GUL6 1792 aa22.05■■□□□ 1.12
CLN5-219ENST00000637537 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
CLN5-219ENST00000637537 DOCK2Q92608 1830 aa22.04■■□□□ 1.12
CLN5-219ENST00000637537 COL1A1P02452 1464 aaPredicted RBP22.04■■□□□ 1.12
CLN5-219ENST00000637537 TM4SF1P30408 202 aa22.04■■□□□ 1.12
CLN5-219ENST00000637537 RALYLQ86SE5 291 aaKnown RBP22.04■■□□□ 1.12
CLN5-219ENST00000637537 ADGRA1Q86SQ6 560 aa22.04■■□□□ 1.12
CLN5-219ENST00000637537 LCORLQ8N3X6 602 aa22.04■■□□□ 1.12
CLN5-219ENST00000637537 NCOA7Q8NI08 942 aa22.04■■□□□ 1.12
CLN5-219ENST00000637537 PDLIM2Q96JY6 352 aa22.04■■□□□ 1.12
CLN5-219ENST00000637537 FAM84BQ96KN1 310 aaPredicted RBP22.04■■□□□ 1.12
CLN5-219ENST00000637537 ATP6V1DQ9Y5K8 247 aa22.04■■□□□ 1.12
CLN5-219ENST00000637537 ZNF804BA4D1E1 1349 aa22.04■■□□□ 1.12
CLN5-219ENST00000637537 PDCP20941 246 aa22.04■■□□□ 1.12
CLN5-219ENST00000637537 KRT27Q7Z3Y8 459 aa22.04■■□□□ 1.12
CLN5-219ENST00000637537 TFCP2L1Q9NZI6 479 aa22.04■■□□□ 1.12
CLN5-219ENST00000637537 MCM5P33992 734 aa22.03■■□□□ 1.12
CLN5-219ENST00000637537 CAVIN4Q5BKX8 364 aa22.03■■□□□ 1.12
CLN5-219ENST00000637537 NSUN7Q8NE18 718 aaKnown RBP22.03■■□□□ 1.12
CLN5-219ENST00000637537 R3HCC1Q9Y3T6 440 aaKnown RBP22.03■■□□□ 1.12
CLN5-219ENST00000637537 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.03■■□□□ 1.12
CLN5-219ENST00000637537 MBD3O95983 291 aa22.02■■□□□ 1.12
CLN5-219ENST00000637537 IFNL3Q8IZI9 196 aa22.02■■□□□ 1.12
CLN5-219ENST00000637537 RAI14Q9P0K7 980 aa22.02■■□□□ 1.12
CLN5-219ENST00000637537 TNRC6CQ9HCJ0 1690 aaKnown RBP22.02■■□□□ 1.12
CLN5-219ENST00000637537 SYCE3A1L190 88 aa22.02■■□□□ 1.11
CLN5-219ENST00000637537 STK11IPQ8N1F8 1099 aa22.02■■□□□ 1.11
CLN5-219ENST00000637537 BRWD3Q6RI45 1802 aa22.01■■□□□ 1.11
CLN5-219ENST00000637537 PATL2C9JE40 543 aaKnown RBP22.01■■□□□ 1.11
CLN5-219ENST00000637537 CTDSPL2Q05D32 466 aa22.01■■□□□ 1.11
CLN5-219ENST00000637537 GNL3LQ9NVN8 582 aaKnown RBP22.01■■□□□ 1.11
CLN5-219ENST00000637537 FAM13BQ9NYF5 915 aa22.01■■□□□ 1.11
CLN5-219ENST00000637537 PTPDC1A2A3K4 754 aa22.01■■□□□ 1.11
CLN5-219ENST00000637537 GSG1L2A8MUP6 293 aa22.01■■□□□ 1.11
CLN5-219ENST00000637537 CNBD1Q8NA66 436 aa22.01■■□□□ 1.11
CLN5-219ENST00000637537 FAM184AQ8NB25 1140 aa22.01■■□□□ 1.11
CLN5-219ENST00000637537 NAPBQ9H115 298 aa22.01■■□□□ 1.11
CLN5-219ENST00000637537 JAG2Q9Y219 1238 aa22.01■■□□□ 1.11
CLN5-219ENST00000637537 CARMIL3Q8ND23 1372 aa22■■□□□ 1.11
CLN5-219ENST00000637537 B4E1Z4 1266 aa22■■□□□ 1.11
CLN5-219ENST00000637537 CYP7A1P22680 504 aa22■■□□□ 1.11
CLN5-219ENST00000637537 CYB5R4Q7L1T6 521 aa22■■□□□ 1.11
CLN5-219ENST00000637537 TXNRD3Q86VQ6 643 aa22■■□□□ 1.11
CLN5-219ENST00000637537 SMARCC2Q8TAQ2 1214 aa22■■□□□ 1.11
CLN5-219ENST00000637537 SLC4A4Q9Y6R1 1079 aa22■■□□□ 1.11
CLN5-219ENST00000637537 NEDD4P46934 1319 aa22■■□□□ 1.11
CLN5-219ENST00000637537 TRDNQ13061 729 aa22■■□□□ 1.11
CLN5-219ENST00000637537 TMEM87AQ8NBN3 555 aa22■■□□□ 1.11
CLN5-219ENST00000637537 ZNF274Q96GC6 653 aaPredicted RBP22■■□□□ 1.11
CLN5-219ENST00000637537 KLF18A0A0U1RQI7 1052 aa21.99■■□□□ 1.11
CLN5-219ENST00000637537 TACC3Q9Y6A5 838 aa21.99■■□□□ 1.11
CLN5-219ENST00000637537 H3BQV1 296 aa21.98■■□□□ 1.11
CLN5-219ENST00000637537 GYS1P13807 737 aa21.98■■□□□ 1.11
CLN5-219ENST00000637537 IFFO2Q5TF58 517 aa21.98■■□□□ 1.11
CLN5-219ENST00000637537 MTERF4Q7Z6M4 381 aaKnown RBP21.98■■□□□ 1.11
CLN5-219ENST00000637537 TFIP11Q9UBB9 837 aaKnown RBP21.98■■□□□ 1.11
CLN5-219ENST00000637537 PRR5LQ6MZQ0 368 aa21.98■■□□□ 1.11
CLN5-219ENST00000637537 SDR42E1Q8WUS8 393 aa21.98■■□□□ 1.11
CLN5-219ENST00000637537 LLPHQ9BRT6 129 aaKnown RBP21.98■■□□□ 1.11
CLN5-219ENST00000637537 SENP2Q9HC62 589 aa21.98■■□□□ 1.11
CLN5-219ENST00000637537 UQCRHLA0A096LP55 91 aa21.97■■□□□ 1.11
CLN5-219ENST00000637537 GOLGA8BA8MQT2 603 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms