RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	TRIM42	Q8IWZ5	723 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	DRC7	Q8IY82	874 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	IFNL3	Q8IZI9	196 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	CPXCR1	Q8N123	301 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	SPATA5	Q8NB90	893 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	KCT2	Q8NC54	265 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	OR2W6P	Q8NHA6	318 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	GATAD2B	Q8WXI9	593 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	BAP1	Q92560	729 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	USP7	Q93009	1102 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	HLA-C	Q95604	372 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	CNKSR1	Q969H4	720 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	GMCL1	Q96IK5	515 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	CEP63	Q96MT8	703 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	FMNL2	Q96PY5	1086 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	NUP88	Q99567	741 aa	Predicted RBP	2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	TTC1	Q99614	292 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	HERPUD2	Q9BSE4	406 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	OXCT2	Q9BYC2	517 aa	Predicted RBP	2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	PHACTR1	Q9C0D0	580 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	MAF1	Q9H063	256 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	FAM204A	Q9H8W3	233 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	QTRT2	Q9H974	415 aa	Known RBP	2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	ELP3	Q9H9T3	547 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	LIN7B	Q9HAP6	207 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	TMEM39A	Q9NV64	488 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	SLAIN2	Q9P270	581 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	SERTAD1	Q9UHV2	236 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	PNMA8B	Q9ULN7	279 aa	Predicted RBP	2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	GTF2A1L	Q9UNN4	478 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	PHF24	Q9UPV7	400 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	COLQ	Q9Y215	455 aa	Predicted RBP	2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	NUB1	Q9Y5A7	615 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	PAXBP1	Q9Y5B6	917 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	EID1	Q9Y6B2	187 aa		2.02	□□□□□ -2.09
MECP2-222	ENST00000637533	WASHC2A	Q641Q2	1341 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	KDM2B	Q8NHM5	1336 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	TRAV20	A0A0B4J274	112 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	TMEM238L	A0A1B0GVL6	79 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	ANO9	A1A5B4	782 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	CCDC85C	A6NKD9	419 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533		H7C1W4	665 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	AQP7	O14520	342 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	TNFRSF10B	O14763	440 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	SMAD7	O15105	426 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	TSPAN6	O43657	245 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	PDE8A	O60658	829 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	RFPL1	O75677	317 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	ALDH1L1	O75891	902 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	SMNDC1	O75940	238 aa	Known RBP eCLIP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	SNUPN	O95149	360 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	MYCLP1	P12525	358 aa	Predicted RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	HCLS1	P14317	486 aa	Predicted RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	RPL17	P18621	184 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	FSHR	P23945	695 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	CYP2C19	P33261	490 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	LIG3	P49916	1009 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	IDH3A	P50213	366 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	SCNN1B	P51168	640 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	SCNN1D	P51172	638 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	NEK2	P51955	445 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	RAB15	P59190	212 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	RACK1	P63244	317 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	RNF4	P78317	190 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	PLAUR	Q03405	335 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	CAMK2G	Q13555	558 aa	Predicted RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	GTF2H3	Q13889	308 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	DHX8	Q14562	1220 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	KIF22	Q14807	665 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	PPP2R5E	Q16537	467 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	NFE2	Q16621	373 aa	Predicted RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	ACBD5	Q5T8D3	534 aa	Predicted RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	SAMD5	Q5TGI4	173 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	MEX3C	Q5U5Q3	659 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	LARP1B	Q659C4	914 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	TTBK2	Q6IQ55	1244 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	ZNF280D	Q6N043	979 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	FOXR1	Q6PIV2	292 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	KRBA2	Q6ZNG9	492 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	ZNF662	Q6ZS27	426 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	HDX	Q7Z353	690 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	SRGAP1	Q7Z6B7	1085 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	DDX53	Q86TM3	631 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	SAPCD2	Q86UD0	394 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	NCAPG2	Q86XI2	1143 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	WDR75	Q8IWA0	830 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	DHX37	Q8IY37	1157 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	ZNF687	Q8N1G0	1237 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	CMTR1	Q8N1G2	835 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	MICALL1	Q8N3F8	863 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	PDILT	Q8N807	584 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	GPATCH11	Q8N954	259 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	JMY	Q8N9B5	988 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	ANKLE1	Q8NAG6	615 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	GOLM1	Q8NBJ4	401 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	PPHLN1	Q8NEY8	458 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	NOC3L	Q8WTT2	800 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	PAWR	Q96IZ0	340 aa	Known RBP	2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	COX4I2	Q96KJ9	171 aa		2.01	□□□□□ -2.09
MECP2-222	ENST00000637533	FAM161B	Q96MY7	647 aa		2.01	□□□□□ -2.09

Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms