RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 FAM173BQ6P4H8 233 aa8.9□□□□□ -0.99
CACNA1D-220ENST00000636999 TTC6Q86TZ1 520 aa8.9□□□□□ -0.99
CACNA1D-220ENST00000636999 ARHGEF1Q92888 912 aaKnown RBP8.9□□□□□ -0.99
CACNA1D-220ENST00000636999 C16orf45Q96MC5 204 aaPredicted RBP8.9□□□□□ -0.99
CACNA1D-220ENST00000636999 FEZ1Q99689 392 aa8.9□□□□□ -0.99
CACNA1D-220ENST00000636999 DACT1Q9NYF0 836 aa8.9□□□□□ -0.99
CACNA1D-220ENST00000636999 STAP2Q9UGK3 403 aa8.9□□□□□ -0.99
CACNA1D-220ENST00000636999 LEMD3Q9Y2U8 911 aa8.9□□□□□ -0.99
CACNA1D-220ENST00000636999 COL3A1P02461 1466 aaPredicted RBP8.9□□□□□ -0.99
CACNA1D-220ENST00000636999 IQSEC2Q5JU85 1478 aa8.9□□□□□ -0.99
CACNA1D-220ENST00000636999 GPAA1O43292 621 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 SSRP1Q08945 709 aaKnown RBP8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 TTLL12Q14166 644 aaPredicted RBP8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 POLA2Q14181 598 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 SLC4A8Q2Y0W8 1093 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 UVSSAQ2YD98 709 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 TEX11Q8IYF3 940 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 DDX19AQ9NUU7 478 aaKnown RBP8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 SNX14Q9Y5W7 946 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 COL5A2P05997 1499 aaPredicted RBP8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 KLF18A0A0U1RQI7 1052 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 MMP10P09238 476 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 EIF5P55010 431 aaKnown RBP8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 PDCL3Q9H2J4 239 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 SEC31BQ9NQW1 1179 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 ZNF804BA4D1E1 1349 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 XDHP47989 1333 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 MEGF6O75095 1541 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 KNDC1Q76NI1 1749 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 ZBTB43O43298 467 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 EPB41L2O43491 1005 aaKnown RBP8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 OFD1O75665 1012 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 FAM177A1Q8N128 213 aaPredicted RBP8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 HAUS7Q99871 368 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 CLIP2Q9UDT6 1046 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 CDHR2Q9BYE9 1310 aa8.89□□□□□ -0.99
CACNA1D-220ENST00000636999 PPIP5K2O43314 1243 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 IFIT1BQ5T764 474 aaKnown RBP8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 DHX32Q7L7V1 743 aaKnown RBP8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 CDK5RAP3Q96JB5 506 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 FAM227BQ96M60 508 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 OSBPL3Q9H4L5 887 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 VEZTQ9HBM0 779 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 PRDM10Q9NQV6 1147 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 PRC1O43663 620 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 GYG1P46976 350 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 TSR1Q2NL82 804 aaKnown RBP8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 FSIP1Q8NA03 581 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 ANKRD20A12PQ8NF67 263 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 ORC3Q9UBD5 711 aaPredicted RBP8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 DBNLQ9UJU6 430 aaKnown RBP8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 NDUFB9Q9Y6M9 179 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 ATP10DQ9P241 1426 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 ADCY9O60503 1353 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 BIN1O00499 593 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 GNAQP50148 359 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 BCAMP50895 628 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 EIF6P56537 245 aaKnown RBP8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 NOLC1Q14978 699 aaKnown RBP eCLIP8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 NIM1KQ8IY84 436 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 WDHD1O75717 1129 aaPredicted RBP8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 BRD1O95696 1058 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 Q6ZUG5 572 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 PDCL2Q8N4E4 241 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 CCDC12Q8WUD4 166 aaPredicted RBP8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 TRMT1Q9NXH9 659 aaKnown RBP8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 CEP131Q9UPN4 1083 aa8.88□□□□□ -0.99
CACNA1D-220ENST00000636999 ZNF532Q9HCE3 1301 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 TNNI2P48788 182 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 ANO6Q4KMQ2 910 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 MFSD14BQ5SR56 506 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 TTLL5Q6EMB2 1281 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 BCS1LQ9Y276 419 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 PPEF1O14829 653 aaPredicted RBP8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 SEMA3EO15041 775 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 GTF2IP78347 998 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 CBX1P83916 185 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 RBM26Q5T8P6 1007 aaKnown RBP8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 CCDC129Q6ZRS4 1044 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 GPT2Q8TD30 523 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 EDC3Q96F86 508 aaKnown RBP8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 ARMT1Q9H993 441 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 CARMIL3Q8ND23 1372 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 MYOM1P52179 1685 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 NPR1P16066 1061 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 KCNA4P22459 653 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 LMOD1P29536 600 aaPredicted RBP8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 HSPA4P34932 840 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 PHKA1P46020 1223 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 GRAPQ13588 217 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 HS1BP3Q53T59 392 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 CC2D2BQ6DHV5 1058 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 RUFY3Q7L099 469 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 FNBP4Q8N3X1 1017 aaPredicted RBP8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 GRAPLQ8TC17 118 aaPredicted RBP8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 ANO10Q9NW15 660 aa8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 BSDC1Q9NW68 430 aaPredicted RBP8.87□□□□□ -0.99
CACNA1D-220ENST00000636999 PLEKHG2Q9H7P9 1386 aa8.86□□□□□ -0.99
CACNA1D-220ENST00000636999 TNNT1P13805 278 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms