RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	LRIT3	Q3SXY7	679 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	ZKSCAN2	Q63HK3	967 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	AP1AR	Q63HQ0	302 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	TMEM87A	Q8NBN3	555 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	RNF214	Q8ND24	703 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	ANKRD24	Q8TF21	1146 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	ERCC4	Q92889	916 aa	Predicted RBP	4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	ARMC5	Q96C12	935 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	DRC1	Q96MC2	740 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	PUS7	Q96PZ0	661 aa	Known RBP	4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	R3HDML	Q9H3Y0	253 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	TTC12	Q9H892	705 aa	Predicted RBP	4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	TMEM63C	Q9P1W3	806 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	COG6	Q9Y2V7	657 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	POLR2A	P24928	1970 aa	Known RBP	4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	BCOR	Q6W2J9	1755 aa		4.7	□□□□□ -1.66
CHD2-225	ENST00000636861	HELZ2	Q9BYK8	2649 aa	Known RBP	4.7	□□□□□ -1.66
CHD2-225	ENST00000636861		A0A087WUV0	522 aa	Predicted RBP	4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	MAFG	O15525	162 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	C21orf2	O43822	256 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	TBC1D8	O95759	1140 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	CAP1	Q01518	475 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	DDR1	Q08345	913 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	NEDD9	Q14511	834 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	PDCD2	Q16342	344 aa	Predicted RBP	4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	KMT5B	Q4FZB7	885 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	TMEM132E	Q6IEE7	984 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	GBP6	Q6ZN66	633 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	KIAA1328	Q86T90	577 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	LURAP1L	Q8IV03	231 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	MSL3	Q8N5Y2	521 aa	Known RBP	4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	LINC00116	Q8NCU8	138 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	GPT2	Q8TD30	523 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	TRPM4	Q8TD43	1214 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	ADAMTS19	Q8TE59	1207 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	ZNF592	Q92610	1267 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	DPF3	Q92784	378 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	SHISA4	Q96DD7	197 aa		4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	INTS4	Q96HW7	963 aa	Known RBP	4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	NECAB3	Q96P71	396 aa	Predicted RBP	4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	A1CF	Q9NQ94	594 aa	Known RBP	4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	MYH14	Q7Z406	1995 aa	Known RBP	4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	COL11A2	P13942	1736 aa	Predicted RBP	4.69	□□□□□ -1.66
CHD2-225	ENST00000636861	ZZEF1	O43149	2961 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	FRY	Q5TBA9	3013 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	SLX4	Q8IY92	1834 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861		A0A1B0GUA9	196 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	FAM86C2P	A6NEL3	165 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	TUBB	P07437	444 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	PNMA6A	P0CW24	399 aa	Predicted RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	H2AFX	P16104	143 aa	Predicted RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	MX1	P20591	662 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	ARID4A	P29374	1257 aa	Predicted RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	NF2	P35240	595 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	GSDMD	P57764	484 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	ANAPC15	P60006	121 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	UBE2H	P62256	183 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	ICA1	Q05084	483 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	RBBP5	Q15291	538 aa	Known RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	C11orf91	Q3C1V1	193 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	CCDC158	Q5M9N0	1113 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	FBXO38	Q6PIJ6	1188 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	DLK2	Q6UY11	383 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	UBE2Q1	Q7Z7E8	422 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	PNMA8A	Q86V59	439 aa	Predicted RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	SPATS2	Q86XZ4	545 aa	Known RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	WDR63	Q8IWG1	891 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	DRC7	Q8IY82	874 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	DZIP1L	Q8IYY4	767 aa	Known RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	NGDN	Q8NEJ9	315 aa	Known RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	GAS2L2	Q8NHY3	880 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	FAM200A	Q8TCP9	573 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	TSC1	Q92574	1164 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	C16orf45	Q96MC5	204 aa	Predicted RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	TRERF1	Q96PN7	1200 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	CDX2	Q99626	313 aa	Predicted RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	GDF15	Q99988	308 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	GBP3	Q9H0R5	595 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	TOMM22	Q9NS69	142 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	KCND1	Q9NSA2	647 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	CPSF2	Q9P2I0	782 aa	Known RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	CLIP2	Q9UDT6	1046 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	ANKRD50	Q9ULJ7	1429 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	MYO18B	Q8IUG5	2567 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	ACE	P12821	1306 aa		4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	COL2A1	P02458	1487 aa	Predicted RBP	4.68	□□□□□ -1.66
CHD2-225	ENST00000636861	ITGB4	P16144	1822 aa		4.67	□□□□□ -1.66
CHD2-225	ENST00000636861	COL4A5	P29400	1685 aa		4.67	□□□□□ -1.66
CHD2-225	ENST00000636861	ANKRD31	Q8N7Z5	1873 aa		4.67	□□□□□ -1.66
CHD2-225	ENST00000636861	NRXN2	Q9P2S2	1712 aa		4.67	□□□□□ -1.66
CHD2-225	ENST00000636861	ANKRD26	Q9UPS8	1709 aa		4.67	□□□□□ -1.66
CHD2-225	ENST00000636861	CPSF1	Q10570	1443 aa	Known RBP	4.67	□□□□□ -1.66
CHD2-225	ENST00000636861	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.67	□□□□□ -1.66
CHD2-225	ENST00000636861	ANKRD18B	A2A2Z9	1011 aa		4.67	□□□□□ -1.66
CHD2-225	ENST00000636861		A6NNZ2	444 aa		4.67	□□□□□ -1.66
CHD2-225	ENST00000636861	GPR25	O00155	361 aa		4.67	□□□□□ -1.66

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