RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	HMGB2	P26583	209 aa	Known RBP	18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	FGD1	P98174	961 aa		18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	APOBR	Q0VD83	1088 aa		18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	CHAF1A	Q13111	956 aa	Predicted RBP	18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	GSE1	Q14687	1217 aa		18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	MSL1	Q68DK7	614 aa		18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	TBC1D10C	Q8IV04	446 aa		18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	KLRG2	A4D1S0	409 aa	Predicted RBP	18.8	■□□□□ 0.6
CACNA1A-231	ENST00000636816	INCENP	Q9NQS7	918 aa		18.8	■□□□□ 0.6
CACNA1A-231	ENST00000636816	LEMD3	Q9Y2U8	911 aa		18.8	■□□□□ 0.6
CACNA1A-231	ENST00000636816	XDH	P47989	1333 aa		18.8	■□□□□ 0.6
CACNA1A-231	ENST00000636816	SEMA3E	O15041	775 aa		18.79	■□□□□ 0.6
CACNA1A-231	ENST00000636816	HOXA10	P31260	410 aa	Predicted RBP	18.79	■□□□□ 0.6
CACNA1A-231	ENST00000636816	EN1	Q05925	392 aa	Predicted RBP	18.79	■□□□□ 0.6
CACNA1A-231	ENST00000636816	EZH2	Q15910	746 aa	Known RBP	18.79	■□□□□ 0.6
CACNA1A-231	ENST00000636816	AGXT2	Q9BYV1	514 aa		18.79	■□□□□ 0.6
CACNA1A-231	ENST00000636816	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.79	■□□□□ 0.6
CACNA1A-231	ENST00000636816	SLC4A4	Q9Y6R1	1079 aa		18.79	■□□□□ 0.6
CACNA1A-231	ENST00000636816	ALX1	Q15699	326 aa		18.79	■□□□□ 0.6
CACNA1A-231	ENST00000636816	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.79	■□□□□ 0.6
CACNA1A-231	ENST00000636816	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.79	■□□□□ 0.6
CACNA1A-231	ENST00000636816	MB21D2	Q8IYB1	491 aa	Predicted RBP	18.79	■□□□□ 0.6
CACNA1A-231	ENST00000636816	MMP10	P09238	476 aa		18.78	■□□□□ 0.6
CACNA1A-231	ENST00000636816	ANTXR2	P58335	489 aa		18.78	■□□□□ 0.6
CACNA1A-231	ENST00000636816	GTF3C6	Q969F1	213 aa		18.78	■□□□□ 0.6
CACNA1A-231	ENST00000636816	TACC3	Q9Y6A5	838 aa		18.78	■□□□□ 0.6
CACNA1A-231	ENST00000636816	STX6	O43752	255 aa		18.77	■□□□□ 0.6
CACNA1A-231	ENST00000636816	BBOX1	O75936	387 aa		18.77	■□□□□ 0.6
CACNA1A-231	ENST00000636816	DYNLL1	P63167	89 aa	Known RBP	18.77	■□□□□ 0.6
CACNA1A-231	ENST00000636816	SCRN1	Q12765	414 aa		18.77	■□□□□ 0.6
CACNA1A-231	ENST00000636816	FLAD1	Q8NFF5	587 aa		18.77	■□□□□ 0.6
CACNA1A-231	ENST00000636816	NCOA7	Q8NI08	942 aa		18.77	■□□□□ 0.6
CACNA1A-231	ENST00000636816	CRAMP1	Q96RY5	1269 aa		18.77	■□□□□ 0.6
CACNA1A-231	ENST00000636816	GZF1	Q9H116	711 aa	Predicted RBP	18.77	■□□□□ 0.6
CACNA1A-231	ENST00000636816	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.77	■□□□□ 0.6
CACNA1A-231	ENST00000636816	WDR33	Q9C0J8	1336 aa	Known RBP	18.77	■□□□□ 0.6
CACNA1A-231	ENST00000636816	MAGEB6P1	A0A0J9YX57	407 aa		18.77	■□□□□ 0.59
CACNA1A-231	ENST00000636816	PRC1	O43663	620 aa		18.77	■□□□□ 0.59
CACNA1A-231	ENST00000636816	PRDX5	P30044	214 aa		18.77	■□□□□ 0.59
CACNA1A-231	ENST00000636816	MECOM	Q03112	1051 aa		18.77	■□□□□ 0.59
CACNA1A-231	ENST00000636816	CTDSPL2	Q05D32	466 aa		18.77	■□□□□ 0.59
CACNA1A-231	ENST00000636816	NAA16	Q6N069	864 aa	Predicted RBP	18.77	■□□□□ 0.59
CACNA1A-231	ENST00000636816	NAPB	Q9H115	298 aa		18.77	■□□□□ 0.59
CACNA1A-231	ENST00000636816	NRXN2	Q9P2S2	1712 aa		18.77	■□□□□ 0.59
CACNA1A-231	ENST00000636816	JAK2	O60674	1132 aa		18.76	■□□□□ 0.59
CACNA1A-231	ENST00000636816	ZSCAN22	P10073	491 aa	Predicted RBP	18.76	■□□□□ 0.59
CACNA1A-231	ENST00000636816	SDR42E1	Q8WUS8	393 aa		18.76	■□□□□ 0.59
CACNA1A-231	ENST00000636816	NSUN4	Q96CB9	384 aa	Known RBP	18.76	■□□□□ 0.59
CACNA1A-231	ENST00000636816	CAMKK2	Q96RR4	588 aa		18.76	■□□□□ 0.59
CACNA1A-231	ENST00000636816	RIOK1	Q9BRS2	568 aa	Known RBP	18.76	■□□□□ 0.59
CACNA1A-231	ENST00000636816	BRIP1	Q9BX63	1249 aa		18.76	■□□□□ 0.59
CACNA1A-231	ENST00000636816	LMBRD1	Q9NUN5	540 aa		18.76	■□□□□ 0.59
CACNA1A-231	ENST00000636816	TCHH	Q07283	1943 aa		18.76	■□□□□ 0.59
CACNA1A-231	ENST00000636816	UFL1	O94874	794 aa		18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	MCM5	P33992	734 aa		18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	CCT2	P78371	535 aa	Known RBP	18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	CYB5R4	Q7L1T6	521 aa		18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	RALYL	Q86SE5	291 aa	Known RBP	18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	PDS5A	Q29RF7	1337 aa	Known RBP	18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	GOLGA6L22	H0YM25	854 aa		18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	PFKFB2	O60825	505 aa		18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	TDRD7	Q8NHU6	1098 aa	Known RBP	18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	POLL	Q9UGP5	575 aa		18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	MTMR6	Q9Y217	621 aa		18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	PARP3	Q9Y6F1	533 aa		18.75	■□□□□ 0.59
CACNA1A-231	ENST00000636816	NEDD4	P46934	1319 aa		18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	CHD4	Q14839	1912 aa		18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816		B4E1Z4	1266 aa		18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	SMIM22	K7EJ46	135 aa		18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	PRPF40A	O75400	957 aa	Known RBP	18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	SRGN	P10124	158 aa		18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	GNAT2	P19087	354 aa		18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	PDIA3	P30101	505 aa	Known RBP	18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	TDO2	P48775	406 aa		18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	STK11IP	Q8N1F8	1099 aa		18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	NCOA5	Q9HCD5	579 aa	Known RBP	18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	BRPF3	Q9ULD4	1205 aa		18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	ZMYM6	O95789	1325 aa		18.74	■□□□□ 0.59
CACNA1A-231	ENST00000636816	ATP2B4	P23634	1241 aa		18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	GRIK5	Q16478	980 aa		18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	LARP1B	Q659C4	914 aa	Known RBP	18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	OLFM4	Q6UX06	510 aa		18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	GGA1	Q9UJY5	639 aa		18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	RGPD4	Q7Z3J3	1758 aa		18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	CTDNEP1	O95476	244 aa		18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	C15orf52	Q6ZUT6	534 aa	Known RBP	18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	FBXL16	Q8N461	479 aa		18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	TBC1D16	Q8TBP0	767 aa		18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	FBXO41	Q8TF61	875 aa		18.73	■□□□□ 0.59
CACNA1A-231	ENST00000636816	CCDC88A	Q3V6T2	1871 aa		18.72	■□□□□ 0.59
CACNA1A-231	ENST00000636816	PPEF1	O14829	653 aa	Predicted RBP	18.72	■□□□□ 0.59
CACNA1A-231	ENST00000636816	TRDN	Q13061	729 aa		18.72	■□□□□ 0.59
CACNA1A-231	ENST00000636816	SLC15A2	Q16348	729 aa		18.72	■□□□□ 0.59
CACNA1A-231	ENST00000636816	ZNF804A	Q7Z570	1209 aa		18.72	■□□□□ 0.59
CACNA1A-231	ENST00000636816	DDX11	Q96FC9	970 aa		18.72	■□□□□ 0.59
CACNA1A-231	ENST00000636816	NACAP1	Q9BZK3	213 aa		18.72	■□□□□ 0.59
CACNA1A-231	ENST00000636816	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.72	■□□□□ 0.59
CACNA1A-231	ENST00000636816	VPS37C	A5D8V6	355 aa	Predicted RBP	18.72	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms