RNA–Protein interactions for RNA: ENST00000636754.1

LGI1-222, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,200 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-222	ENST00000636754	USP16	Q9Y5T5	823 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	KCNQ3	O43525	872 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	ST5	P78524	1137 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	PHLDB3	Q6NSJ2	640 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	KSR2	Q6VAB6	950 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	CCDC191	Q8NCU4	936 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	PLA2G12B	Q9BX93	195 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	RRP7A	Q9Y3A4	280 aa	Known RBP	4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	LTBP3	Q9NS15	1303 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	ANKRD31	Q8N7Z5	1873 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	RCCD1	A6NED2	376 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	DDX11L8	A8MPP1	907 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	GRIN3B	O60391	1043 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	HOXA10	P31260	410 aa	Predicted RBP	4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	TCIRG1	Q13488	830 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	NOM1	Q5C9Z4	860 aa	Known RBP	4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	PRPF38B	Q5VTL8	546 aa	Known RBP	4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	TPTE2	Q6XPS3	522 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	TBC1D9	Q6ZT07	1266 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	SETDB2	Q96T68	719 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	THUMPD2	Q9BTF0	503 aa	Known RBP	4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	METTL22	Q9BUU2	404 aa	Predicted RBP	4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	API5	Q9BZZ5	524 aa	Known RBP	4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	CHMP4B	Q9H444	224 aa	Known RBP	4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	UTY	O14607	1347 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	DUOX1	Q9NRD9	1551 aa		4.54	□□□□□ -1.68
LGI1-222	ENST00000636754	IPO8	O15397	1037 aa	Known RBP	4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	A1BG	P04217	495 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	CFH	P08603	1231 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	ZNF16	P17020	682 aa	Predicted RBP	4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	AAMP	Q13685	434 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	CNGB1	Q14028	1251 aa	Predicted RBP	4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	NFIX	Q14938	502 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	CRY2	Q49AN0	593 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	USPL1	Q5W0Q7	1092 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	KANK3	Q6NY19	840 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	EPS8L1	Q8TE68	723 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	KRTAP4-7	Q9BYR0	210 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	ZNF609	O15014	1411 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	MYH3	P11055	1940 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	COL11A2	P13942	1736 aa	Predicted RBP	4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	PCCA	P05165	728 aa	Predicted RBP	4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	MMP10	P09238	476 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	DNAJB2	P25686	324 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	CANX	P27824	592 aa	Known RBP	4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	NEXN	Q0ZGT2	675 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	B4GALNT3	Q6L9W6	998 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	SULF1	Q8IWU6	871 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	CNBD1	Q8NA66	436 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	C8orf58	Q8NAV2	365 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	LINS1	Q8NG48	757 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	CNKSR1	Q969H4	720 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	CRAMP1	Q96RY5	1269 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	ZBTB3	Q9H5J0	574 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	CHPF2	Q9P2E5	772 aa		4.53	□□□□□ -1.68
LGI1-222	ENST00000636754	ADCY9	O60503	1353 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	NTSR2	O95665	410 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	SERPINB2	P05120	415 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	VSIG8	P0DPA2	414 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	NPR1	P16066	1061 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	ERCC3	P19447	782 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	MMP14	P50281	582 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	CCT4	P50991	539 aa	Known RBP	4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	EXOSC9	Q06265	439 aa	Known RBP	4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	DDR1	Q08345	913 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	SF3B3	Q15393	1217 aa	Known RBP	4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	TMEM164	Q5U3C3	297 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754		Q8N3U1	123 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	XAGE3	Q8WTP9	111 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	LRRN4	Q8WUT4	740 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	SPSB2	Q99619	263 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	UTP14A	Q9BVJ6	771 aa	Known RBP	4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	ZMIZ1	Q9ULJ6	1067 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	SH3TC1	Q8TE82	1336 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	ALDH1B1	P30837	517 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	SEMA3F	Q13275	785 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	PRR5L	Q6MZQ0	368 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	COPS6	Q7L5N1	327 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	NLRP10	Q86W26	655 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	STK32A	Q8WU08	396 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	DNAAF4	Q8WXU2	420 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	MASTL	Q96GX5	879 aa		4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	CWC25	Q9NXE8	425 aa	Predicted RBP	4.52	□□□□□ -1.69
LGI1-222	ENST00000636754	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	FER1L6	Q2WGJ9	1857 aa		4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	SNED1	Q8TER0	1413 aa		4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	LTBP1	Q14766	1721 aa		4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	ABCC4	O15439	1325 aa		4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	ZBTB7A	O95365	584 aa		4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	TBC1D9B	Q66K14	1250 aa		4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	AMIGO3	Q86WK7	504 aa		4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	SCUBE3	Q8IX30	993 aa		4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	SYT17	Q9BSW7	474 aa		4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	BCL2L13	Q9BXK5	485 aa		4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	MIS18A	Q9NYP9	233 aa		4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.51	□□□□□ -1.69
LGI1-222	ENST00000636754	LAS1L	Q9Y4W2	734 aa	Known RBP	4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms