RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 USP17L1Q7RTZ2 530 aa12.89□□□□□ -0.35
CLN5-213ENST00000636681 KIAA0825Q8IV33 1275 aa12.89□□□□□ -0.35
CLN5-213ENST00000636681 MIGA1Q8NAN2 632 aa12.89□□□□□ -0.35
CLN5-213ENST00000636681 WDR66Q8TBY9 1149 aa12.89□□□□□ -0.35
CLN5-213ENST00000636681 NSUN4Q96CB9 384 aaKnown RBP12.89□□□□□ -0.35
CLN5-213ENST00000636681 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
CLN5-213ENST00000636681 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
CLN5-213ENST00000636681 DYNLL1P63167 89 aaKnown RBP12.88□□□□□ -0.35
CLN5-213ENST00000636681 TTF1Q15361 905 aaPredicted RBP12.88□□□□□ -0.35
CLN5-213ENST00000636681 ZMYM1Q5SVZ6 1142 aa12.88□□□□□ -0.35
CLN5-213ENST00000636681 JDP2Q8WYK2 163 aa12.88□□□□□ -0.35
CLN5-213ENST00000636681 ESYT1Q9BSJ8 1104 aa12.88□□□□□ -0.35
CLN5-213ENST00000636681 DIAPH3Q9NSV4 1193 aa12.88□□□□□ -0.35
CLN5-213ENST00000636681 RNF181Q9P0P0 153 aa12.88□□□□□ -0.35
CLN5-213ENST00000636681 MAST3O60307 1309 aa12.88□□□□□ -0.35
CLN5-213ENST00000636681 SALL1Q9NSC2 1324 aa12.88□□□□□ -0.35
CLN5-213ENST00000636681 LDHBP07195 334 aaKnown RBP12.87□□□□□ -0.35
CLN5-213ENST00000636681 LMNB1P20700 586 aa12.87□□□□□ -0.35
CLN5-213ENST00000636681 CYP7A1P22680 504 aa12.87□□□□□ -0.35
CLN5-213ENST00000636681 VPS53Q5VIR6 699 aa12.87□□□□□ -0.35
CLN5-213ENST00000636681 STRIP1Q5VSL9 837 aa12.87□□□□□ -0.35
CLN5-213ENST00000636681 C9orf131Q5VYM1 1079 aa12.87□□□□□ -0.35
CLN5-213ENST00000636681 ECM29Q5VYK3 1845 aa12.87□□□□□ -0.35
CLN5-213ENST00000636681 FZD9O00144 591 aa12.86□□□□□ -0.35
CLN5-213ENST00000636681 MFAP1P55081 439 aaKnown RBP12.86□□□□□ -0.35
CLN5-213ENST00000636681 PTH1RQ03431 593 aa12.86□□□□□ -0.35
CLN5-213ENST00000636681 MAP3K12Q12852 859 aa12.86□□□□□ -0.35
CLN5-213ENST00000636681 VPS33BQ9H267 617 aa12.86□□□□□ -0.35
CLN5-213ENST00000636681 TTF2Q9UNY4 1162 aaKnown RBP12.86□□□□□ -0.35
CLN5-213ENST00000636681 GJA3Q9Y6H8 435 aa12.86□□□□□ -0.35
CLN5-213ENST00000636681 FOXP2O15409 715 aa12.86□□□□□ -0.35
CLN5-213ENST00000636681 SGSM2O43147 1006 aa12.86□□□□□ -0.35
CLN5-213ENST00000636681 VIL1P09327 827 aaKnown RBP12.86□□□□□ -0.35
CLN5-213ENST00000636681 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
CLN5-213ENST00000636681 DZIP1Q86YF9 867 aaKnown RBP12.86□□□□□ -0.35
CLN5-213ENST00000636681 ARMT1Q9H993 441 aa12.86□□□□□ -0.35
CLN5-213ENST00000636681 ZBTB22O15209 634 aa12.85□□□□□ -0.35
CLN5-213ENST00000636681 PRKAB2O43741 272 aa12.85□□□□□ -0.35
CLN5-213ENST00000636681 CIAPIN1Q6FI81 312 aa12.85□□□□□ -0.35
CLN5-213ENST00000636681 RSBN1LQ6PCB5 846 aaPredicted RBP12.85□□□□□ -0.35
CLN5-213ENST00000636681 LCORLQ8N3X6 602 aa12.85□□□□□ -0.35
CLN5-213ENST00000636681 GMLQ99445 158 aa12.85□□□□□ -0.35
CLN5-213ENST00000636681 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLN5-213ENST00000636681 POLR2AP24928 1970 aaKnown RBP12.85□□□□□ -0.35
CLN5-213ENST00000636681 MBD4O95243 580 aa12.84□□□□□ -0.35
CLN5-213ENST00000636681 EGFRP00533 1210 aa12.84□□□□□ -0.35
CLN5-213ENST00000636681 UBE3CQ15386 1083 aa12.84□□□□□ -0.35
CLN5-213ENST00000636681 TBC1D22AQ8WUA7 517 aa12.84□□□□□ -0.35
CLN5-213ENST00000636681 APPBP2Q92624 585 aa12.84□□□□□ -0.35
CLN5-213ENST00000636681 AATFQ9NY61 560 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLN5-213ENST00000636681 RFX7Q2KHR2 1363 aa12.84□□□□□ -0.35
CLN5-213ENST00000636681 FOCADQ5VW36 1801 aa12.84□□□□□ -0.35
CLN5-213ENST00000636681 SMIM22K7EJ46 135 aa12.84□□□□□ -0.35
CLN5-213ENST00000636681 GPAA1O43292 621 aa12.84□□□□□ -0.35
CLN5-213ENST00000636681 SPTY2D1Q68D10 685 aaPredicted RBP12.84□□□□□ -0.35
CLN5-213ENST00000636681 DAGLAQ9Y4D2 1042 aa12.84□□□□□ -0.35
CLN5-213ENST00000636681 DDNO94850 711 aaPredicted RBP12.83□□□□□ -0.36
CLN5-213ENST00000636681 GMPSP49915 693 aaPredicted RBP12.83□□□□□ -0.36
CLN5-213ENST00000636681 EVX2Q03828 476 aa12.83□□□□□ -0.36
CLN5-213ENST00000636681 MCMDC2Q4G0Z9 681 aa12.83□□□□□ -0.36
CLN5-213ENST00000636681 RIOK1Q9BRS2 568 aaKnown RBP12.83□□□□□ -0.36
CLN5-213ENST00000636681 LSG1Q9H089 658 aaKnown RBP12.83□□□□□ -0.36
CLN5-213ENST00000636681 ANO2Q9NQ90 1003 aa12.83□□□□□ -0.36
CLN5-213ENST00000636681 MROH7-TTC4A0A0A0MT08 1334 aa12.82□□□□□ -0.36
CLN5-213ENST00000636681 ZFYP08048 801 aaPredicted RBP12.82□□□□□ -0.36
CLN5-213ENST00000636681 MYH1P12882 1939 aa12.82□□□□□ -0.36
CLN5-213ENST00000636681 CRKP46108 304 aa12.82□□□□□ -0.36
CLN5-213ENST00000636681 EIF6P56537 245 aaKnown RBP12.82□□□□□ -0.36
CLN5-213ENST00000636681 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
CLN5-213ENST00000636681 CCDC171Q6TFL3 1326 aa12.82□□□□□ -0.36
CLN5-213ENST00000636681 ZGPATQ8N5A5 531 aaKnown RBP12.82□□□□□ -0.36
CLN5-213ENST00000636681 SH3RF3Q8TEJ3 882 aaPredicted RBP12.82□□□□□ -0.36
CLN5-213ENST00000636681 SDR42E1Q8WUS8 393 aa12.82□□□□□ -0.36
CLN5-213ENST00000636681 HELLSQ9NRZ9 838 aa12.82□□□□□ -0.36
CLN5-213ENST00000636681 SCAF8Q9UPN6 1271 aaKnown RBP12.82□□□□□ -0.36
CLN5-213ENST00000636681 TAF6LQ9Y6J9 622 aa12.82□□□□□ -0.36
CLN5-213ENST00000636681 NAV1Q8NEY1 1877 aa12.82□□□□□ -0.36
CLN5-213ENST00000636681 HIP1O00291 1037 aa12.81□□□□□ -0.36
CLN5-213ENST00000636681 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
CLN5-213ENST00000636681 BTDP43251 543 aa12.81□□□□□ -0.36
CLN5-213ENST00000636681 CACNB3P54284 484 aa12.81□□□□□ -0.36
CLN5-213ENST00000636681 SLC4A8Q2Y0W8 1093 aa12.81□□□□□ -0.36
CLN5-213ENST00000636681 STRBPQ96SI9 672 aaKnown RBP12.81□□□□□ -0.36
CLN5-213ENST00000636681 LAMA4Q16363 1823 aa12.81□□□□□ -0.36
CLN5-213ENST00000636681 ASTN2O75129 1339 aaPredicted RBP12.81□□□□□ -0.36
CLN5-213ENST00000636681 MAGEB6P1A0A0J9YX57 407 aa12.81□□□□□ -0.36
CLN5-213ENST00000636681 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLN5-213ENST00000636681 FKBP1AP62942 108 aaKnown RBP12.81□□□□□ -0.36
CLN5-213ENST00000636681 AIDAQ96BJ3 306 aa12.81□□□□□ -0.36
CLN5-213ENST00000636681 EPB41L4AQ9HCS5 686 aaPredicted RBP12.81□□□□□ -0.36
CLN5-213ENST00000636681 GAKO14976 1311 aa12.8□□□□□ -0.36
CLN5-213ENST00000636681 HSPD1P10809 573 aaKnown RBP12.8□□□□□ -0.36
CLN5-213ENST00000636681 RHBDL3P58872 404 aa12.8□□□□□ -0.36
CLN5-213ENST00000636681 COL9A3Q14050 684 aaPredicted RBP12.8□□□□□ -0.36
CLN5-213ENST00000636681 TNIP1Q15025 636 aa12.8□□□□□ -0.36
CLN5-213ENST00000636681 CFAP100Q494V2 611 aa12.8□□□□□ -0.36
CLN5-213ENST00000636681 RBM26Q5T8P6 1007 aaKnown RBP12.8□□□□□ -0.36
CLN5-213ENST00000636681 APOBEC3HQ6NTF7 200 aaKnown RBP12.8□□□□□ -0.36
CLN5-213ENST00000636681 CASC1Q6TDU7 716 aa12.8□□□□□ -0.36
CLN5-213ENST00000636681 SAMD7Q7Z3H4 446 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms