RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SMARCA5O60264 1052 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 RPS6KA2Q15349 733 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 SND1Q7KZF4 910 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 ZKSCAN3Q9BRR0 538 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 ECHDC1Q9NTX5 307 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 PRG4Q92954 1404 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 PRPF6O94906 941 aaKnown RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 LACTBP83111 547 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 PPP2R5DQ14738 602 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 ZSCAN30Q86W11 494 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 CCDC42Q96M95 316 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 RIMBP2O15034 1052 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 PARP1P09874 1014 aaKnown RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 GKAP1Q5VSY0 366 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 CACNA2D3Q8IZS8 1091 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 ZCRB1Q8TBF4 217 aaKnown RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 PIK3R4Q99570 1358 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 TYW5A2RUC4 315 aaKnown RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 PDE6AP16499 860 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 DDB1Q16531 1140 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 PRR16Q569H4 304 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 NOP9Q86U38 636 aaKnown RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 UBL4BQ8N7F7 174 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 ABCC11Q96J66 1382 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 SMIM23A6NLE4 172 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 KRT3P12035 628 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 ERCC3P19447 782 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 PDE6BP35913 854 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 TNNC1P63316 161 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 NEDD9Q14511 834 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 VWA3BQ502W6 1294 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 CASC4Q6P4E1 433 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 ELMSAN1Q6PJG2 1045 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 DACT3Q96B18 629 aaPredicted RBP6.21□□□□□ -1.41
SCN1A-209ENST00000635750 GLT8D2Q9H1C3 349 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 SNRKQ9NRH2 765 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 KCNG1Q9UIX4 513 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 TTLL3Q9Y4R7 772 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 RRP9O43818 475 aaKnown RBP6.21□□□□□ -1.41
SCN1A-209ENST00000635750 KCNA4P22459 653 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 GTF2F1P35269 517 aaKnown RBP eCLIP6.21□□□□□ -1.41
SCN1A-209ENST00000635750 PPP1R2P41236 205 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 UBE2HP62256 183 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 UBXN1Q04323 297 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 C10orf67Q8IYJ2 551 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 CCDC170Q8IYT3 715 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 SMCR8Q8TEV9 937 aaPredicted RBP6.21□□□□□ -1.41
SCN1A-209ENST00000635750 CDCA7LQ96GN5 454 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 MCM9Q9NXL9 1143 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 PNMA2Q9UL42 364 aa6.21□□□□□ -1.41
SCN1A-209ENST00000635750 CFAP65Q6ZU64 1925 aaKnown RBP6.21□□□□□ -1.42
SCN1A-209ENST00000635750 KLF18A0A0U1RQI7 1052 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 ZBED4O75132 1171 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 MCM4P33991 863 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 INPP1P49441 399 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 NAA25Q14CX7 972 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 UTP11Q9Y3A2 253 aaKnown RBP6.21□□□□□ -1.42
SCN1A-209ENST00000635750 TRIM56Q9BRZ2 755 aaKnown RBP6.21□□□□□ -1.42
SCN1A-209ENST00000635750 BCAP29Q9UHQ4 241 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 GRIN2BQ13224 1484 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 FGD5Q6ZNL6 1462 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 WDR7Q9Y4E6 1490 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 ESPNB1AK53 854 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 SPOPO43791 374 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 MAST3O60307 1309 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 GBP1P32455 592 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 ZNF165P49910 485 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 YWHAEP62258 255 aaKnown RBP6.21□□□□□ -1.42
SCN1A-209ENST00000635750 CCDC62Q6P9F0 684 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 ANKRD13DQ6ZTN6 518 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 TTC6Q86TZ1 520 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 ANKRD24Q8TF21 1146 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 UBLCP1Q8WVY7 318 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-209ENST00000635750 ZNF644Q9H582 1327 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-209ENST00000635750 VAV2P52735 878 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 RAPGEF1Q13905 1077 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 EAPPQ56P03 285 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-209ENST00000635750 DPY19L2Q6NUT2 758 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 CERS3Q8IU89 383 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 SUPT20HQ8NEM7 779 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 MED10Q9BTT4 135 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 ANO3Q9BYT9 981 aa6.21□□□□□ -1.42
SCN1A-209ENST00000635750 PTPDC1A2A3K4 754 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 I3L4J1 428 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 MCM7P33993 719 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 IRX5P78411 483 aaPredicted RBP6.2□□□□□ -1.42
SCN1A-209ENST00000635750 PSMD6Q15008 389 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 TEKT1Q969V4 418 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 CLSTN2Q9H4D0 955 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 ZSWIM4Q9H7M6 989 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 IPO11Q9UI26 975 aaKnown RBP6.2□□□□□ -1.42
SCN1A-209ENST00000635750 NSFL1CQ9UNZ2 370 aaKnown RBP6.2□□□□□ -1.42
SCN1A-209ENST00000635750 ATAD2BQ9ULI0 1458 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 MARCKSP29966 332 aaPredicted RBP6.2□□□□□ -1.42
SCN1A-209ENST00000635750 TRIM75PA6NK02 468 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 ACTN4O43707 911 aaKnown RBP6.2□□□□□ -1.42
SCN1A-209ENST00000635750 ABL1P00519 1130 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 IRX3P78415 501 aaPredicted RBP6.2□□□□□ -1.42
SCN1A-209ENST00000635750 TRAPPC3LQ5T215 181 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 HAUS3Q68CZ6 603 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms