RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 MRIQ9BWK5 157 aa12.47□□□□□ -0.41
RHOXF1P3-201ENST00000635058 CFHR5Q9BXR6 569 aa12.47□□□□□ -0.41
RHOXF1P3-201ENST00000635058 TMOD2Q9NZR1 351 aa12.47□□□□□ -0.41
RHOXF1P3-201ENST00000635058 FZD1Q9UP38 647 aa12.47□□□□□ -0.41
RHOXF1P3-201ENST00000635058 MAST3O60307 1309 aa12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 TCP10L2B9ZVM9 353 aa12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 EYA2O00167 538 aa12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 SLC5A1P13866 664 aa12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 KLHDC4Q8TBB5 520 aa12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 LPIN2Q92539 896 aa12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 HOOK2Q96ED9 719 aa12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 CDCA7LQ96GN5 454 aa12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 WNK4Q96J92 1243 aa12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 CLMNQ96JQ2 1002 aa12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 API5Q9BZZ5 524 aaKnown RBP12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 SUGT1Q9Y2Z0 365 aa12.46□□□□□ -0.41
RHOXF1P3-201ENST00000635058 KIF16BQ96L93 1317 aa12.45□□□□□ -0.42
RHOXF1P3-201ENST00000635058 IFNL1Q8IU54 200 aa12.45□□□□□ -0.42
RHOXF1P3-201ENST00000635058 VGLL2Q8N8G2 317 aa12.45□□□□□ -0.42
RHOXF1P3-201ENST00000635058 WDR66Q8TBY9 1149 aa12.45□□□□□ -0.42
RHOXF1P3-201ENST00000635058 GNL3LQ9NVN8 582 aaKnown RBP12.45□□□□□ -0.42
RHOXF1P3-201ENST00000635058 CEP126Q9P2H0 1117 aa12.45□□□□□ -0.42
RHOXF1P3-201ENST00000635058 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
RHOXF1P3-201ENST00000635058 NOB1Q9ULX3 412 aaKnown RBP12.45□□□□□ -0.42
RHOXF1P3-201ENST00000635058 CCER2I3L3R5 266 aa12.44□□□□□ -0.42
RHOXF1P3-201ENST00000635058 WDHD1O75717 1129 aaPredicted RBP12.44□□□□□ -0.42
RHOXF1P3-201ENST00000635058 MAP3K9P80192 1104 aa12.44□□□□□ -0.42
RHOXF1P3-201ENST00000635058 TRMT2AQ8IZ69 625 aaKnown RBP12.44□□□□□ -0.42
RHOXF1P3-201ENST00000635058 HPS5Q9UPZ3 1129 aa12.44□□□□□ -0.42
RHOXF1P3-201ENST00000635058 CSADQ9Y600 493 aa12.44□□□□□ -0.42
RHOXF1P3-201ENST00000635058 FGFR2P21802 821 aa12.43□□□□□ -0.42
RHOXF1P3-201ENST00000635058 FBXO46Q6PJ61 603 aaPredicted RBP12.43□□□□□ -0.42
RHOXF1P3-201ENST00000635058 HHIPL2Q6UWX4 724 aa12.43□□□□□ -0.42
RHOXF1P3-201ENST00000635058 OPTNQ96CV9 577 aa12.43□□□□□ -0.42
RHOXF1P3-201ENST00000635058 ZDHHC15Q96MV8 337 aa12.43□□□□□ -0.42
RHOXF1P3-201ENST00000635058 TMEM39BQ9GZU3 492 aa12.43□□□□□ -0.42
RHOXF1P3-201ENST00000635058 ELP3Q9H9T3 547 aa12.43□□□□□ -0.42
RHOXF1P3-201ENST00000635058 AKAP11Q9UKA4 1901 aa12.43□□□□□ -0.42
RHOXF1P3-201ENST00000635058 AOX1Q06278 1338 aa12.42□□□□□ -0.42
RHOXF1P3-201ENST00000635058 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
RHOXF1P3-201ENST00000635058 CIAO1O76071 339 aa12.42□□□□□ -0.42
RHOXF1P3-201ENST00000635058 RFX5P48382 616 aaPredicted RBP12.42□□□□□ -0.42
RHOXF1P3-201ENST00000635058 SOX10P56693 466 aa12.42□□□□□ -0.42
RHOXF1P3-201ENST00000635058 ARHGEF6Q15052 776 aa12.42□□□□□ -0.42
RHOXF1P3-201ENST00000635058 FKBP1CQ5VVH2 108 aa12.42□□□□□ -0.42
RHOXF1P3-201ENST00000635058 FAM83AQ86UY5 434 aa12.42□□□□□ -0.42
RHOXF1P3-201ENST00000635058 SIL1Q9H173 461 aa12.42□□□□□ -0.42
RHOXF1P3-201ENST00000635058 IGF2BP3O00425 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
RHOXF1P3-201ENST00000635058 GNAI3P08754 354 aa12.41□□□□□ -0.42
RHOXF1P3-201ENST00000635058 IL15P40933 162 aaPredicted RBP12.41□□□□□ -0.42
RHOXF1P3-201ENST00000635058 GTF2A2P52657 109 aa12.41□□□□□ -0.42
RHOXF1P3-201ENST00000635058 GRIK5Q16478 980 aa12.41□□□□□ -0.42
RHOXF1P3-201ENST00000635058 ATP2B3Q16720 1220 aa12.41□□□□□ -0.42
RHOXF1P3-201ENST00000635058 DCAF15Q66K64 600 aa12.41□□□□□ -0.42
RHOXF1P3-201ENST00000635058 ARHGAP45Q92619 1136 aa12.41□□□□□ -0.42
RHOXF1P3-201ENST00000635058 ERO1AQ96HE7 468 aa12.41□□□□□ -0.42
RHOXF1P3-201ENST00000635058 TEPSINQ96N21 525 aa12.41□□□□□ -0.42
RHOXF1P3-201ENST00000635058 R3HDMLQ9H3Y0 253 aa12.41□□□□□ -0.42
RHOXF1P3-201ENST00000635058 TESPA1A2RU30 521 aaPredicted RBP12.4□□□□□ -0.42
RHOXF1P3-201ENST00000635058 LDHBP07195 334 aaKnown RBP12.4□□□□□ -0.42
RHOXF1P3-201ENST00000635058 CACNB3P54284 484 aa12.4□□□□□ -0.42
RHOXF1P3-201ENST00000635058 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
RHOXF1P3-201ENST00000635058 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.4□□□□□ -0.42
RHOXF1P3-201ENST00000635058 ATG9AQ7Z3C6 839 aa12.4□□□□□ -0.42
RHOXF1P3-201ENST00000635058 DENND2AQ9ULE3 1009 aa12.4□□□□□ -0.42
RHOXF1P3-201ENST00000635058 TRIM17Q9Y577 477 aa12.4□□□□□ -0.42
RHOXF1P3-201ENST00000635058 LRRFIP2Q9Y608 721 aaKnown RBP12.4□□□□□ -0.42
RHOXF1P3-201ENST00000635058 SSC5DA1L4H1 1573 aa12.39□□□□□ -0.43
RHOXF1P3-201ENST00000635058 SEMA3EO15041 775 aa12.39□□□□□ -0.43
RHOXF1P3-201ENST00000635058 GJA5P36382 358 aa12.39□□□□□ -0.43
RHOXF1P3-201ENST00000635058 RARSP54136 660 aaKnown RBP12.39□□□□□ -0.43
RHOXF1P3-201ENST00000635058 SP3Q02447 781 aa12.39□□□□□ -0.43
RHOXF1P3-201ENST00000635058 CRHR2Q13324 411 aa12.39□□□□□ -0.43
RHOXF1P3-201ENST00000635058 VGLL4Q14135 290 aa12.39□□□□□ -0.43
RHOXF1P3-201ENST00000635058 ZGPATQ8N5A5 531 aaKnown RBP12.39□□□□□ -0.43
RHOXF1P3-201ENST00000635058 OTUD5Q96G74 571 aa12.39□□□□□ -0.43
RHOXF1P3-201ENST00000635058 WRNIP1Q96S55 665 aa12.39□□□□□ -0.43
RHOXF1P3-201ENST00000635058 ZFYVE28Q9HCC9 887 aa12.39□□□□□ -0.43
RHOXF1P3-201ENST00000635058 CCL15-CCL14A0A0B4J2E2 113 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 CETPP11597 493 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 CCL15Q16663 113 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 INTS3Q68E01 1043 aaKnown RBP12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 ERO1BQ86YB8 467 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 FAM151AQ8WW52 585 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 PTPN18Q99952 460 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 ZNF341Q9BYN7 854 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 EFCC1Q9HA90 598 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 COPRSQ9NQ92 184 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 AKAP2Q9Y2D5 859 aa12.38□□□□□ -0.43
RHOXF1P3-201ENST00000635058 ZNF646O15015 1829 aaPredicted RBP12.37□□□□□ -0.43
RHOXF1P3-201ENST00000635058 SPDYE5A6NIY4 337 aa12.37□□□□□ -0.43
RHOXF1P3-201ENST00000635058 SRGAP3O43295 1099 aa12.37□□□□□ -0.43
RHOXF1P3-201ENST00000635058 SNAPC2Q13487 334 aa12.37□□□□□ -0.43
RHOXF1P3-201ENST00000635058 TAF1CQ15572 869 aaPredicted RBP12.37□□□□□ -0.43
RHOXF1P3-201ENST00000635058 SPTY2D1Q68D10 685 aaPredicted RBP12.37□□□□□ -0.43
RHOXF1P3-201ENST00000635058 OTOP1Q7RTM1 612 aa12.37□□□□□ -0.43
RHOXF1P3-201ENST00000635058 MS4A4AQ96JQ5 239 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms