RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	CD8B	P10966	210 aa		4.96	□□□□□ -1.62
SMARCB1-208	ENST00000634926	BUD31	P41223	144 aa	Predicted RBP	4.96	□□□□□ -1.62
SMARCB1-208	ENST00000634926	IKBKE	Q14164	716 aa		4.96	□□□□□ -1.62
SMARCB1-208	ENST00000634926	LILRA6	Q6PI73	481 aa		4.96	□□□□□ -1.62
SMARCB1-208	ENST00000634926	KSR1	Q8IVT5	923 aa		4.96	□□□□□ -1.62
SMARCB1-208	ENST00000634926	LRRN4CL	Q8ND94	238 aa		4.96	□□□□□ -1.62
SMARCB1-208	ENST00000634926	FAM200A	Q8TCP9	573 aa		4.96	□□□□□ -1.62
SMARCB1-208	ENST00000634926	ADH5	P11766	374 aa		4.95	□□□□□ -1.62
SMARCB1-208	ENST00000634926	RAB6A	P20340	208 aa		4.95	□□□□□ -1.62
SMARCB1-208	ENST00000634926	FUT4	P22083	530 aa		4.95	□□□□□ -1.62
SMARCB1-208	ENST00000634926	DUSP27	Q5VZP5	1158 aa		4.95	□□□□□ -1.62
SMARCB1-208	ENST00000634926	TMEM102	Q8N9M5	508 aa	Predicted RBP	4.95	□□□□□ -1.62
SMARCB1-208	ENST00000634926	NUDT16	Q96DE0	195 aa	Known RBP	4.95	□□□□□ -1.62
SMARCB1-208	ENST00000634926	ZKSCAN3	Q9BRR0	538 aa		4.95	□□□□□ -1.62
SMARCB1-208	ENST00000634926	GGNBP2	Q9H3C7	697 aa		4.95	□□□□□ -1.62
SMARCB1-208	ENST00000634926	RC3H2	Q9HBD1	1191 aa	Known RBP	4.95	□□□□□ -1.62
SMARCB1-208	ENST00000634926	FAM105A	Q9NUU6	356 aa		4.95	□□□□□ -1.62
SMARCB1-208	ENST00000634926	FNDC3A	Q9Y2H6	1198 aa	Known RBP	4.95	□□□□□ -1.62
SMARCB1-208	ENST00000634926	FAM177B	A6PVY3	158 aa		4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	BIN1	O00499	593 aa		4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	ESRRA	P11474	423 aa	Predicted RBP	4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	ARL4D	P49703	201 aa		4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	PKN1	Q16512	942 aa		4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	CFAP70	Q5T0N1	1121 aa		4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	PDE12	Q6L8Q7	609 aa	Known RBP	4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	PLD6	Q8N2A8	252 aa	Known RBP	4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	FAM181A	Q8N9Y4	354 aa		4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	TMEM40	Q8WWA1	233 aa		4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	BSND	Q8WZ55	320 aa		4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	ACSS3	Q9H6R3	686 aa		4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	LGR6	Q9HBX8	967 aa		4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	TIMELESS	Q9UNS1	1208 aa		4.94	□□□□□ -1.62
SMARCB1-208	ENST00000634926	ZNF503-AS2	A6NEH8	195 aa		4.93	□□□□□ -1.62
SMARCB1-208	ENST00000634926	METTL12	A8MUP2	240 aa		4.93	□□□□□ -1.62
SMARCB1-208	ENST00000634926	ECEL1	O95672	775 aa		4.93	□□□□□ -1.62
SMARCB1-208	ENST00000634926	CES1	P23141	567 aa		4.93	□□□□□ -1.62
SMARCB1-208	ENST00000634926	ZNF438	Q7Z4V0	828 aa		4.93	□□□□□ -1.62
SMARCB1-208	ENST00000634926	OSMR	Q99650	979 aa		4.93	□□□□□ -1.62
SMARCB1-208	ENST00000634926	STIM2	Q9P246	746 aa		4.93	□□□□□ -1.62
SMARCB1-208	ENST00000634926	ZMIZ1	Q9ULJ6	1067 aa		4.93	□□□□□ -1.62
SMARCB1-208	ENST00000634926	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	4.92	□□□□□ -1.62
SMARCB1-208	ENST00000634926	GSTM4	Q03013	218 aa		4.92	□□□□□ -1.62
SMARCB1-208	ENST00000634926	KRTAP19-4	Q3LI73	84 aa		4.92	□□□□□ -1.62
SMARCB1-208	ENST00000634926	OGFOD3	Q6PK18	319 aa		4.92	□□□□□ -1.62
SMARCB1-208	ENST00000634926	SOX17	Q9H6I2	414 aa	Predicted RBP	4.92	□□□□□ -1.62
SMARCB1-208	ENST00000634926	LATS2	Q9NRM7	1088 aa		4.92	□□□□□ -1.62
SMARCB1-208	ENST00000634926	FAM13B	Q9NYF5	915 aa		4.92	□□□□□ -1.62
SMARCB1-208	ENST00000634926	CRIM1	Q9NZV1	1036 aa		4.92	□□□□□ -1.62
SMARCB1-208	ENST00000634926	NOVA2	Q9UNW9	492 aa	Known RBP	4.92	□□□□□ -1.62
SMARCB1-208	ENST00000634926		B8ZZF3	427 aa		4.91	□□□□□ -1.62
SMARCB1-208	ENST00000634926	EREG	O14944	169 aa		4.91	□□□□□ -1.62
SMARCB1-208	ENST00000634926	KRT1	P04264	644 aa		4.91	□□□□□ -1.62
SMARCB1-208	ENST00000634926	ECM1	Q16610	540 aa		4.91	□□□□□ -1.62
SMARCB1-208	ENST00000634926	XKR5	Q6UX68	686 aa		4.91	□□□□□ -1.62
SMARCB1-208	ENST00000634926	STK32A	Q8WU08	396 aa		4.91	□□□□□ -1.62
SMARCB1-208	ENST00000634926	FAM84A	Q96KN4	292 aa		4.91	□□□□□ -1.62
SMARCB1-208	ENST00000634926	CALR3	Q96L12	384 aa	Known RBP	4.91	□□□□□ -1.62
SMARCB1-208	ENST00000634926	SLAIN2	Q9P270	581 aa		4.91	□□□□□ -1.62
SMARCB1-208	ENST00000634926	RB1CC1	Q8TDY2	1594 aa		4.91	□□□□□ -1.62
SMARCB1-208	ENST00000634926	CYP27A1	Q02318	531 aa		4.9	□□□□□ -1.63
SMARCB1-208	ENST00000634926	PEAR1	Q5VY43	1037 aa	Predicted RBP	4.9	□□□□□ -1.63
SMARCB1-208	ENST00000634926	DYM	Q7RTS9	669 aa		4.9	□□□□□ -1.63
SMARCB1-208	ENST00000634926	GSX1	Q9H4S2	264 aa	Predicted RBP	4.9	□□□□□ -1.63
SMARCB1-208	ENST00000634926	PRDM7	Q9NQW5	492 aa		4.9	□□□□□ -1.63
SMARCB1-208	ENST00000634926	LMCD1	Q9NZU5	365 aa		4.9	□□□□□ -1.63
SMARCB1-208	ENST00000634926	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.9	□□□□□ -1.63
SMARCB1-208	ENST00000634926	ACIN1	Q9UKV3	1341 aa	Known RBP	4.9	□□□□□ -1.63
SMARCB1-208	ENST00000634926	LRRC10B	A6NIK2	292 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	MAOB	P27338	520 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	MAP7	Q14244	749 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	SWI5	Q1ZZU3	235 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	ZNF423	Q2M1K9	1284 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	AKAP4	Q5JQC9	854 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	TTLL10	Q6ZVT0	673 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	PROSER2	Q86WR7	435 aa	Predicted RBP	4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	STK11IP	Q8N1F8	1099 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	ASAP3	Q8TDY4	903 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	SLC38A3	Q99624	504 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	SEPT3	Q9UH03	358 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	UNC13A	Q9UPW8	1703 aa		4.89	□□□□□ -1.63
SMARCB1-208	ENST00000634926	NACAD	O15069	1562 aa		4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	FLII	Q13045	1269 aa		4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	CDK5R2	Q13319	367 aa		4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	MLANA	Q16655	118 aa		4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	LRRC56	Q8IYG6	542 aa	Predicted RBP	4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	PI4K2B	Q8TCG2	481 aa		4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	EDEM1	Q92611	657 aa		4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	LIN37	Q96GY3	246 aa	Predicted RBP	4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	YIPF2	Q9BWQ6	316 aa		4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	PPP1R9A	Q9ULJ8	1098 aa		4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	PLAGL2	Q9UPG8	496 aa		4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	DAGLA	Q9Y4D2	1042 aa		4.88	□□□□□ -1.63
SMARCB1-208	ENST00000634926	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.87	□□□□□ -1.63
SMARCB1-208	ENST00000634926	ZSCAN22	P10073	491 aa	Predicted RBP	4.87	□□□□□ -1.63
SMARCB1-208	ENST00000634926	RFX1	P22670	979 aa		4.87	□□□□□ -1.63
SMARCB1-208	ENST00000634926	ASPA	P45381	313 aa		4.87	□□□□□ -1.63
SMARCB1-208	ENST00000634926	FYB2	Q5VWT5	728 aa		4.87	□□□□□ -1.63
SMARCB1-208	ENST00000634926	NETO1	Q8TDF5	533 aa		4.87	□□□□□ -1.63
SMARCB1-208	ENST00000634926	TRIM56	Q9BRZ2	755 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms