RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 GADD45BO75293 160 aaPredicted RBP6.55□□□□□ -1.36
NEK3-211ENST00000629912 LETM1O95202 739 aaPredicted RBP6.55□□□□□ -1.36
NEK3-211ENST00000629912 CTDNEP1O95476 244 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 APPP05067 770 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 HIBADHP31937 336 aaKnown RBP6.55□□□□□ -1.36
NEK3-211ENST00000629912 GYG1P46976 350 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 ANTXR2P58335 489 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 STK3Q13188 491 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 NFIXQ14938 502 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 ATL3Q6DD88 541 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 CAVIN1Q6NZI2 390 aaKnown RBP6.55□□□□□ -1.36
NEK3-211ENST00000629912 GIMAP6Q6P9H5 292 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 C15orf52Q6ZUT6 534 aaKnown RBP6.55□□□□□ -1.36
NEK3-211ENST00000629912 RALYLQ86SE5 291 aaKnown RBP6.55□□□□□ -1.36
NEK3-211ENST00000629912 AMIGO3Q86WK7 504 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 NSUN7Q8NE18 718 aaKnown RBP6.55□□□□□ -1.36
NEK3-211ENST00000629912 SYAP1Q96A49 352 aaPredicted RBP6.55□□□□□ -1.36
NEK3-211ENST00000629912 CHAMP1Q96JM3 812 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 TMEM87BQ96K49 555 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 LRRC2Q9BYS8 371 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 NACAP1Q9BZK3 213 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 NBPF3Q9H094 633 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 CNNM2Q9H8M5 875 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 TMEM63CQ9P1W3 806 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 LRP2BPQ9P2M1 347 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 ANAPC4Q9UJX5 808 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 NSFL1CQ9UNZ2 370 aaKnown RBP6.55□□□□□ -1.36
NEK3-211ENST00000629912 CNPY2Q9Y2B0 182 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 C4AP0C0L4 1744 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 CARMIL3Q8ND23 1372 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 BRWD3Q6RI45 1802 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 CHD4Q14839 1912 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 SALL1Q9NSC2 1324 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 IRS2Q9Y4H2 1338 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.54□□□□□ -1.36
NEK3-211ENST00000629912 KLRG2A4D1S0 409 aaPredicted RBP6.54□□□□□ -1.36
NEK3-211ENST00000629912 VPS37CA5D8V6 355 aaPredicted RBP6.54□□□□□ -1.36
NEK3-211ENST00000629912 PLSCR1O15162 318 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 JAK2O60674 1132 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 BBOX1O75936 387 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 MBD4O95243 580 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 GYS1P13807 737 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 CYP7A1P22680 504 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 LIFRP42702 1097 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 HAND2P61296 217 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 KRT85P78386 507 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 DNM1Q05193 864 aaKnown RBP6.54□□□□□ -1.36
NEK3-211ENST00000629912 RESTQ13127 1097 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 GRAPQ13588 217 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 AKNAD1Q5T1N1 836 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 LRSAM1Q6UWE0 723 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 CHST3Q7LGC8 479 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 FAM184AQ8NB25 1140 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 GRAPLQ8TC17 118 aaPredicted RBP6.54□□□□□ -1.36
NEK3-211ENST00000629912 IGDCC4Q8TDY8 1250 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 KRT23Q9C075 422 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 SCAND2PQ9GZW5 306 aaPredicted RBP6.54□□□□□ -1.36
NEK3-211ENST00000629912 ARMT1Q9H993 441 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 BRPF3Q9ULD4 1205 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 ANGEL1Q9UNK9 670 aaKnown RBP6.54□□□□□ -1.36
NEK3-211ENST00000629912 HPS5Q9UPZ3 1129 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 SLC4A4Q9Y6R1 1079 aa6.54□□□□□ -1.36
NEK3-211ENST00000629912 MAGEB6P1A0A0J9YX57 407 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 KLF18A0A0U1RQI7 1052 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 PTPDC1A2A3K4 754 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 WTIPA6NIX2 430 aaPredicted RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 H3BQV1 296 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 SH2B2O14492 632 aaPredicted RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 PHF14O94880 888 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 SERPINB2P05120 415 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 FGRP09769 529 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 PCP11498 1178 aaKnown RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 FDPSP14324 419 aaKnown RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 HOXA10P31260 410 aaPredicted RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 RBM6P78332 1123 aaKnown RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 CCT2P78371 535 aaKnown RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 CRY2Q49AN0 593 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 IFFO2Q5TF58 517 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 SPTY2D1Q68D10 685 aaPredicted RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 PRR5LQ6MZQ0 368 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 MFSD6Q6ZSS7 791 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 CYB5R4Q7L1T6 521 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 CDC37L1Q7L3B6 337 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 SGMS1Q86VZ5 419 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 VPS37DQ86XT2 251 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 TBC1D10CQ8IV04 446 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 PROM2Q8N271 834 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 TMTC2Q8N394 836 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 LCORLQ8N3X6 602 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 STAG1Q8WVM7 1258 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 RIOK1Q9BRS2 568 aaKnown RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 BRIP1Q9BX63 1249 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 NAPBQ9H115 298 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 RNF41Q9H4P4 317 aaPredicted RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 GDPD2Q9HCC8 539 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 EPB41L4AQ9HCS5 686 aaPredicted RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 GPHNQ9NQX3 736 aaPredicted RBP6.53□□□□□ -1.36
NEK3-211ENST00000629912 RAI14Q9P0K7 980 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 ZSWIM5Q9P217 1185 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 RBM27Q9P2N5 1060 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms