RNA–Protein interactions for RNA: ENST00000626188.1

CHRNA4-208, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 441 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-208ENST00000626188 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.68■□□□□ 0.74
CHRNA4-208ENST00000626188 TEPSINQ96N21 525 aa19.68■□□□□ 0.74
CHRNA4-208ENST00000626188 TMEM39BQ9GZU3 492 aa19.68■□□□□ 0.74
CHRNA4-208ENST00000626188 TTF2Q9UNY4 1162 aaKnown RBP19.68■□□□□ 0.74
CHRNA4-208ENST00000626188 NR2E3Q9Y5X4 410 aa19.68■□□□□ 0.74
CHRNA4-208ENST00000626188 RANBP2P49792 3224 aaKnown RBP19.68■□□□□ 0.74
CHRNA4-208ENST00000626188 MYH16Q9H6N6 1097 aa19.67■□□□□ 0.74
CHRNA4-208ENST00000626188 ZCCHC17Q9NP64 241 aaKnown RBP19.67■□□□□ 0.74
CHRNA4-208ENST00000626188 SERPINA10Q9UK55 444 aa19.67■□□□□ 0.74
CHRNA4-208ENST00000626188 CHMP3Q9Y3E7 222 aa19.67■□□□□ 0.74
CHRNA4-208ENST00000626188 SPDYE5A6NIY4 337 aa19.66■□□□□ 0.74
CHRNA4-208ENST00000626188 BTBD19C9JJ37 291 aa19.66■□□□□ 0.74
CHRNA4-208ENST00000626188 PLIN1O60240 522 aa19.66■□□□□ 0.74
CHRNA4-208ENST00000626188 IFIT5Q13325 482 aaKnown RBP19.66■□□□□ 0.74
CHRNA4-208ENST00000626188 SNAPC2Q13487 334 aa19.66■□□□□ 0.74
CHRNA4-208ENST00000626188 MFSD14BQ5SR56 506 aa19.66■□□□□ 0.74
CHRNA4-208ENST00000626188 DZIP1LQ8IYY4 767 aaKnown RBP19.66■□□□□ 0.74
CHRNA4-208ENST00000626188 TSPYL6Q8N831 410 aa19.66■□□□□ 0.74
CHRNA4-208ENST00000626188 RAET1EQ8TD07 263 aa19.66■□□□□ 0.74
CHRNA4-208ENST00000626188 BIN2Q9UBW5 565 aaPredicted RBP19.66■□□□□ 0.74
CHRNA4-208ENST00000626188 ZSWIM8A7E2V4 1837 aa19.65■□□□□ 0.74
CHRNA4-208ENST00000626188 APAF1O14727 1248 aa19.65■□□□□ 0.74
CHRNA4-208ENST00000626188 HOXD10P28358 340 aa19.65■□□□□ 0.74
CHRNA4-208ENST00000626188 ERO1BQ86YB8 467 aa19.65■□□□□ 0.74
CHRNA4-208ENST00000626188 SRRDQ9UH36 339 aa19.65■□□□□ 0.74
CHRNA4-208ENST00000626188 GRK4P32298 578 aa19.64■□□□□ 0.73
CHRNA4-208ENST00000626188 PSMC4P43686 418 aa19.64■□□□□ 0.73
CHRNA4-208ENST00000626188 GJA8P48165 433 aa19.64■□□□□ 0.73
CHRNA4-208ENST00000626188 WRNIP1Q96S55 665 aa19.64■□□□□ 0.73
CHRNA4-208ENST00000626188 FAM205AQ6ZU69 1335 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 IRF6O14896 467 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 FMNL1O95466 1100 aaPredicted RBP19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 GJB1P08034 283 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 CCL5P13501 91 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 CASP7P55210 303 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 TAF7LQ5H9L4 462 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 G2E3Q7L622 706 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 RNF208Q9H0X6 261 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 PRO3102Q9H379 93 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 CPA4Q9UI42 421 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 RIPOR2Q9Y4F9 1068 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 SNCAIPQ9Y6H5 919 aa19.63■□□□□ 0.73
CHRNA4-208ENST00000626188 CRKP46108 304 aa19.62■□□□□ 0.73
CHRNA4-208ENST00000626188 TRIM47Q96LD4 638 aa19.62■□□□□ 0.73
CHRNA4-208ENST00000626188 MYPNQ86TC9 1320 aa19.61■□□□□ 0.73
CHRNA4-208ENST00000626188 ZBTB7BO15156 539 aaPredicted RBP19.61■□□□□ 0.73
CHRNA4-208ENST00000626188 SLC4A2P04920 1241 aa19.61■□□□□ 0.73
CHRNA4-208ENST00000626188 OSBPP22059 807 aa19.61■□□□□ 0.73
CHRNA4-208ENST00000626188 UBXN2AP68543 259 aa19.61■□□□□ 0.73
CHRNA4-208ENST00000626188 C17orf99Q6UX52 265 aa19.61■□□□□ 0.73
CHRNA4-208ENST00000626188 ZKSCAN4Q969J2 545 aaPredicted RBP19.61■□□□□ 0.73
CHRNA4-208ENST00000626188 CNNM1Q9NRU3 951 aa19.61■□□□□ 0.73
CHRNA4-208ENST00000626188 A0A1W2PPC1 479 aa19.6■□□□□ 0.73
CHRNA4-208ENST00000626188 FARP2O94887 1054 aaPredicted RBP19.6■□□□□ 0.73
CHRNA4-208ENST00000626188 PPIL2Q13356 520 aa19.6■□□□□ 0.73
CHRNA4-208ENST00000626188 LDHAL6AQ6ZMR3 332 aa19.6■□□□□ 0.73
CHRNA4-208ENST00000626188 UBE2Q1Q7Z7E8 422 aa19.6■□□□□ 0.73
CHRNA4-208ENST00000626188 LINS1Q8NG48 757 aa19.6■□□□□ 0.73
CHRNA4-208ENST00000626188 DNAAF4Q8WXU2 420 aa19.6■□□□□ 0.73
CHRNA4-208ENST00000626188 HOOK2Q96ED9 719 aa19.6■□□□□ 0.73
CHRNA4-208ENST00000626188 EVI5O60447 810 aa19.59■□□□□ 0.73
CHRNA4-208ENST00000626188 CTGFP29279 349 aa19.59■□□□□ 0.73
CHRNA4-208ENST00000626188 HIBADHP31937 336 aaKnown RBP19.59■□□□□ 0.73
CHRNA4-208ENST00000626188 CACNB3P54284 484 aa19.59■□□□□ 0.73
CHRNA4-208ENST00000626188 FKBP5Q13451 457 aaPredicted RBP19.59■□□□□ 0.73
CHRNA4-208ENST00000626188 CCDC57Q2TAC2 916 aa19.59■□□□□ 0.73
CHRNA4-208ENST00000626188 TDRD7Q8NHU6 1098 aaKnown RBP19.59■□□□□ 0.73
CHRNA4-208ENST00000626188 TSR2Q969E8 191 aaKnown RBP19.59■□□□□ 0.73
CHRNA4-208ENST00000626188 TMOD2Q9NZR1 351 aa19.59■□□□□ 0.73
CHRNA4-208ENST00000626188 ARAP2Q8WZ64 1704 aa19.59■□□□□ 0.73
CHRNA4-208ENST00000626188 GYG1P46976 350 aa19.58■□□□□ 0.72
CHRNA4-208ENST00000626188 FLIIQ13045 1269 aa19.58■□□□□ 0.72
CHRNA4-208ENST00000626188 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.58■□□□□ 0.72
CHRNA4-208ENST00000626188 U2AF1L4Q8WU68 220 aaKnown RBP19.58■□□□□ 0.72
CHRNA4-208ENST00000626188 LRCH3Q96II8 777 aa19.58■□□□□ 0.72
CHRNA4-208ENST00000626188 ZNF594Q96JF6 807 aaPredicted RBP19.58■□□□□ 0.72
CHRNA4-208ENST00000626188 A0A0C4DFX4 3053 aa19.57■□□□□ 0.72
CHRNA4-208ENST00000626188 PDHXO00330 501 aa19.57■□□□□ 0.72
CHRNA4-208ENST00000626188 SOX1O00570 391 aaPredicted RBP19.57■□□□□ 0.72
CHRNA4-208ENST00000626188 FOXO4P98177 505 aa19.57■□□□□ 0.72
CHRNA4-208ENST00000626188 PPATQ06203 517 aa19.57■□□□□ 0.72
CHRNA4-208ENST00000626188 TWISTNBQ3B726 338 aaPredicted RBP19.57■□□□□ 0.72
CHRNA4-208ENST00000626188 ANKRD23Q86SG2 305 aa19.57■□□□□ 0.72
CHRNA4-208ENST00000626188 A0A1B0GUL6 1792 aa19.57■□□□□ 0.72
CHRNA4-208ENST00000626188 COL6A3P12111 3177 aa19.56■□□□□ 0.72
CHRNA4-208ENST00000626188 MNX1P50219 401 aaPredicted RBP19.56■□□□□ 0.72
CHRNA4-208ENST00000626188 DCAF15Q66K64 600 aa19.56■□□□□ 0.72
CHRNA4-208ENST00000626188 LMBR1LQ6UX01 489 aa19.56■□□□□ 0.72
CHRNA4-208ENST00000626188 CUL9Q8IWT3 2517 aa19.56■□□□□ 0.72
CHRNA4-208ENST00000626188 FRAT2O75474 233 aaPredicted RBP19.55■□□□□ 0.72
CHRNA4-208ENST00000626188 FCGRTP55899 365 aa19.55■□□□□ 0.72
CHRNA4-208ENST00000626188 PRKCZQ05513 592 aa19.55■□□□□ 0.72
CHRNA4-208ENST00000626188 CHAF1AQ13111 956 aaPredicted RBP19.55■□□□□ 0.72
CHRNA4-208ENST00000626188 UBE4AQ14139 1066 aa19.55■□□□□ 0.72
CHRNA4-208ENST00000626188 VPS37DQ86XT2 251 aa19.55■□□□□ 0.72
CHRNA4-208ENST00000626188 SLAIN1Q8ND83 568 aa19.55■□□□□ 0.72
CHRNA4-208ENST00000626188 TEKT1Q969V4 418 aa19.55■□□□□ 0.72
CHRNA4-208ENST00000626188 UNC93B1Q9H1C4 597 aa19.55■□□□□ 0.72
CHRNA4-208ENST00000626188 STAP2Q9UGK3 403 aa19.55■□□□□ 0.72
CHRNA4-208ENST00000626188 SGPL1O95470 568 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms