RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 TMEM88BA6NKF7 163 aa11.31□□□□□ -0.6
NELFE-214ENST00000625905 LDHBP07195 334 aaKnown RBP11.31□□□□□ -0.6
NELFE-214ENST00000625905 CRKP46108 304 aa11.31□□□□□ -0.6
NELFE-214ENST00000625905 HTRA3P83110 453 aa11.31□□□□□ -0.6
NELFE-214ENST00000625905 GRIK5Q16478 980 aa11.31□□□□□ -0.6
NELFE-214ENST00000625905 USP48Q86UV5 1035 aa11.31□□□□□ -0.6
NELFE-214ENST00000625905 SPATA5Q8NB90 893 aa11.31□□□□□ -0.6
NELFE-214ENST00000625905 TEKT1Q969V4 418 aa11.31□□□□□ -0.6
NELFE-214ENST00000625905 EAF2Q96CJ1 260 aaPredicted RBP11.31□□□□□ -0.6
NELFE-214ENST00000625905 ZBED3Q96IU2 234 aaPredicted RBP11.31□□□□□ -0.6
NELFE-214ENST00000625905 CCDC8Q9H0W5 538 aaPredicted RBP11.31□□□□□ -0.6
NELFE-214ENST00000625905 BCL11AQ9H165 835 aa11.31□□□□□ -0.6
NELFE-214ENST00000625905 CLRN2A0PK11 232 aa11.3□□□□□ -0.6
NELFE-214ENST00000625905 CELF2O95319 508 aaKnown RBP11.3□□□□□ -0.6
NELFE-214ENST00000625905 IFIT2P09913 472 aaKnown RBP11.3□□□□□ -0.6
NELFE-214ENST00000625905 PRDX5P30044 214 aa11.3□□□□□ -0.6
NELFE-214ENST00000625905 MCAMP43121 646 aa11.3□□□□□ -0.6
NELFE-214ENST00000625905 HDLBPQ00341 1268 aaKnown RBP11.3□□□□□ -0.6
NELFE-214ENST00000625905 FMR1Q06787 632 aaKnown RBP eCLIP11.3□□□□□ -0.6
NELFE-214ENST00000625905 AAMPQ13685 434 aa11.3□□□□□ -0.6
NELFE-214ENST00000625905 PI16Q6UXB8 463 aa11.3□□□□□ -0.6
NELFE-214ENST00000625905 DZIP1Q86YF9 867 aaKnown RBP11.3□□□□□ -0.6
NELFE-214ENST00000625905 LRRCC1Q9C099 1032 aa11.3□□□□□ -0.6
NELFE-214ENST00000625905 HMG20BQ9P0W2 317 aa11.3□□□□□ -0.6
NELFE-214ENST00000625905 ABCF2Q9UG63 623 aa11.3□□□□□ -0.6
NELFE-214ENST00000625905 ABT1Q9ULW3 272 aaKnown RBP11.3□□□□□ -0.6
NELFE-214ENST00000625905 PCDHB15Q9Y5E8 787 aa11.3□□□□□ -0.6
NELFE-214ENST00000625905 PCDHAC2Q9Y5I4 1007 aa11.3□□□□□ -0.6
NELFE-214ENST00000625905 SPTY2D1Q68D10 685 aaPredicted RBP11.29□□□□□ -0.6
NELFE-214ENST00000625905 CDCA5Q96FF9 252 aa11.29□□□□□ -0.6
NELFE-214ENST00000625905 PRMT6Q96LA8 375 aaPredicted RBP11.29□□□□□ -0.6
NELFE-214ENST00000625905 ZDHHC15Q96MV8 337 aa11.29□□□□□ -0.6
NELFE-214ENST00000625905 VEZTQ9HBM0 779 aa11.29□□□□□ -0.6
NELFE-214ENST00000625905 SCAF8Q9UPN6 1271 aaKnown RBP11.29□□□□□ -0.6
NELFE-214ENST00000625905 AOX1Q06278 1338 aa11.29□□□□□ -0.6
NELFE-214ENST00000625905 PAPPA2Q9BXP8 1791 aa11.28□□□□□ -0.6
NELFE-214ENST00000625905 POLR2AP24928 1970 aaKnown RBP11.28□□□□□ -0.6
NELFE-214ENST00000625905 TNFAIP1Q13829 316 aa11.28□□□□□ -0.6
NELFE-214ENST00000625905 DIXDC1Q155Q3 683 aa11.28□□□□□ -0.6
NELFE-214ENST00000625905 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
NELFE-214ENST00000625905 ERICH6Q7L0X2 663 aa11.28□□□□□ -0.6
NELFE-214ENST00000625905 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
NELFE-214ENST00000625905 SNRKQ9NRH2 765 aa11.28□□□□□ -0.6
NELFE-214ENST00000625905 TMOD2Q9NZR1 351 aa11.28□□□□□ -0.6
NELFE-214ENST00000625905 PPP2R3BQ9Y5P8 575 aa11.28□□□□□ -0.6
NELFE-214ENST00000625905 AKAP11Q9UKA4 1901 aa11.28□□□□□ -0.6
NELFE-214ENST00000625905 NF2P35240 595 aa11.27□□□□□ -0.61
NELFE-214ENST00000625905 CST9Q5W186 159 aa11.27□□□□□ -0.61
NELFE-214ENST00000625905 HHIPL2Q6UWX4 724 aa11.27□□□□□ -0.61
NELFE-214ENST00000625905 DLK2Q6UY11 383 aa11.27□□□□□ -0.61
NELFE-214ENST00000625905 SLF2Q8IX21 1173 aa11.27□□□□□ -0.61
NELFE-214ENST00000625905 EXOC6Q8TAG9 804 aa11.27□□□□□ -0.61
NELFE-214ENST00000625905 DCTPP1Q9H773 170 aa11.27□□□□□ -0.61
NELFE-214ENST00000625905 TDRD3Q9H7E2 651 aaKnown RBP11.27□□□□□ -0.61
NELFE-214ENST00000625905 RAI14Q9P0K7 980 aa11.27□□□□□ -0.61
NELFE-214ENST00000625905 ZNF70Q9UC06 446 aaPredicted RBP11.27□□□□□ -0.61
NELFE-214ENST00000625905 DAGLAQ9Y4D2 1042 aa11.27□□□□□ -0.61
NELFE-214ENST00000625905 CNTNAP1P78357 1384 aa11.27□□□□□ -0.61
NELFE-214ENST00000625905 MYH2Q9UKX2 1941 aa11.27□□□□□ -0.61
NELFE-214ENST00000625905 SMARCA5O60264 1052 aaPredicted RBP11.26□□□□□ -0.61
NELFE-214ENST00000625905 GSTO1P78417 241 aa11.26□□□□□ -0.61
NELFE-214ENST00000625905 HDAC1Q13547 482 aaPredicted RBP11.26□□□□□ -0.61
NELFE-214ENST00000625905 TBC1D9Q6ZT07 1266 aa11.26□□□□□ -0.61
NELFE-214ENST00000625905 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
NELFE-214ENST00000625905 MRIQ9BWK5 157 aa11.26□□□□□ -0.61
NELFE-214ENST00000625905 DEFB129Q9H1M3 183 aa11.26□□□□□ -0.61
NELFE-214ENST00000625905 GBA2Q9HCG7 927 aaPredicted RBP11.26□□□□□ -0.61
NELFE-214ENST00000625905 LRP2BPQ9P2M1 347 aa11.26□□□□□ -0.61
NELFE-214ENST00000625905 MKRN1Q9UHC7 482 aaKnown RBP11.26□□□□□ -0.61
NELFE-214ENST00000625905 TLL2Q9Y6L7 1015 aa11.26□□□□□ -0.61
NELFE-214ENST00000625905 MROH7-TTC4A0A0A0MT08 1334 aa11.26□□□□□ -0.61
NELFE-214ENST00000625905 GAKO14976 1311 aa11.26□□□□□ -0.61
NELFE-214ENST00000625905 DOCK2Q92608 1830 aa11.25□□□□□ -0.61
NELFE-214ENST00000625905 RASSF10A6NK89 507 aa11.25□□□□□ -0.61
NELFE-214ENST00000625905 TCP10L2B9ZVM9 353 aa11.25□□□□□ -0.61
NELFE-214ENST00000625905 ZAP70P43403 619 aa11.25□□□□□ -0.61
NELFE-214ENST00000625905 TNNI2P48788 182 aa11.25□□□□□ -0.61
NELFE-214ENST00000625905 IRX6P78412 446 aaPredicted RBP11.25□□□□□ -0.61
NELFE-214ENST00000625905 MECOMQ03112 1051 aa11.25□□□□□ -0.61
NELFE-214ENST00000625905 PRAMEF18Q5VWM3 479 aa11.25□□□□□ -0.61
NELFE-214ENST00000625905 APOBEC3HQ6NTF7 200 aaKnown RBP11.25□□□□□ -0.61
NELFE-214ENST00000625905 C2orf69Q8N8R5 385 aa11.25□□□□□ -0.61
NELFE-214ENST00000625905 KLRG1Q96E93 195 aa11.25□□□□□ -0.61
NELFE-214ENST00000625905 GPATCH3Q96I76 525 aa11.25□□□□□ -0.61
NELFE-214ENST00000625905 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
NELFE-214ENST00000625905 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
NELFE-214ENST00000625905 THSD7BQ9C0I4 1608 aa11.24□□□□□ -0.61
NELFE-214ENST00000625905 CYP2E1P05181 493 aaPredicted RBP11.24□□□□□ -0.61
NELFE-214ENST00000625905 BTDP43251 543 aa11.24□□□□□ -0.61
NELFE-214ENST00000625905 CACNB3P54284 484 aa11.24□□□□□ -0.61
NELFE-214ENST00000625905 HUNKP57058 714 aa11.24□□□□□ -0.61
NELFE-214ENST00000625905 FKBP1BP68106 108 aa11.24□□□□□ -0.61
NELFE-214ENST00000625905 TTLL12Q14166 644 aaPredicted RBP11.24□□□□□ -0.61
NELFE-214ENST00000625905 RASA3Q14644 834 aa11.24□□□□□ -0.61
NELFE-214ENST00000625905 SAPCD2Q86UD0 394 aa11.24□□□□□ -0.61
NELFE-214ENST00000625905 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.24□□□□□ -0.61
NELFE-214ENST00000625905 NSUN4Q96CB9 384 aaKnown RBP11.24□□□□□ -0.61
NELFE-214ENST00000625905 GCC1Q96CN9 775 aa11.24□□□□□ -0.61
NELFE-214ENST00000625905 DNAJC2Q99543 621 aaKnown RBP11.24□□□□□ -0.61
NELFE-214ENST00000625905 PIH1D3Q9NQM4 214 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms