RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 RBM17Q96I25 401 aaKnown RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 ZSCAN16Q9H4T2 348 aaPredicted RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 V9GYY5 206 aaPredicted RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 PRAMEF22A3QJZ6 481 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 CBFA2T2O43439 604 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 VDRP11473 427 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 MAGEA10P43363 369 aaPredicted RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 CDR1P51861 262 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 CCDC82Q8N4S0 544 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 KCNH5Q8NCM2 988 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 EZH1Q92800 747 aaPredicted RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 PHACTR1Q9C0D0 580 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 KIF9Q9HAQ2 790 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 IFT57Q9NWB7 429 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 IGSF1Q8N6C5 1336 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 ANKARQ7Z5J8 1434 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 NUTM2BA6NNL0 878 aaPredicted RBP10.58□□□□□ -0.72
USB1-216ENST00000624720 NUTM2EB1AL46 878 aaPredicted RBP10.58□□□□□ -0.72
USB1-216ENST00000624720 RANBP1P43487 201 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 NUTM2AQ8IVF1 878 aaPredicted RBP10.58□□□□□ -0.72
USB1-216ENST00000624720 MYOCDQ8IZQ8 938 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 ZBTB10Q96DT7 871 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 SEZ6LQ9BYH1 1024 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 USP25Q9UHP3 1055 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 PEAK1Q9H792 1746 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 RTN2O75298 545 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 ADAMTS2O95450 1211 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 SFSWAPQ12872 951 aaKnown RBP10.58□□□□□ -0.72
USB1-216ENST00000624720 MVPQ14764 893 aaKnown RBP10.58□□□□□ -0.72
USB1-216ENST00000624720 PARP9Q8IXQ6 854 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 C17orf53Q8N3J3 647 aaPredicted RBP10.58□□□□□ -0.72
USB1-216ENST00000624720 GTF3C6Q969F1 213 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 SMARCE1Q969G3 411 aa10.58□□□□□ -0.72
USB1-216ENST00000624720 TEFQ10587 303 aa10.57□□□□□ -0.72
USB1-216ENST00000624720 DDX54Q8TDD1 881 aaKnown RBP10.57□□□□□ -0.72
USB1-216ENST00000624720 AK7Q96M32 723 aa10.57□□□□□ -0.72
USB1-216ENST00000624720 HDLBPQ00341 1268 aaKnown RBP10.57□□□□□ -0.72
USB1-216ENST00000624720 FXNQ16595 210 aa10.57□□□□□ -0.72
USB1-216ENST00000624720 JPH2Q9BR39 696 aaPredicted RBP10.57□□□□□ -0.72
USB1-216ENST00000624720 MMADHCQ9H3L0 296 aaPredicted RBP10.57□□□□□ -0.72
USB1-216ENST00000624720 NPHP3Q7Z494 1330 aa10.57□□□□□ -0.72
USB1-216ENST00000624720 PIK3C2AO00443 1686 aa10.57□□□□□ -0.72
USB1-216ENST00000624720 ADGRB2O60241 1585 aa10.57□□□□□ -0.72
USB1-216ENST00000624720 MON2Q7Z3U7 1717 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 KIAA0232Q92628 1395 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 MYCLP1P12525 358 aaPredicted RBP10.56□□□□□ -0.72
USB1-216ENST00000624720 DEUP1Q05D60 604 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 MPP3Q13368 585 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 CPLX2Q6PUV4 134 aaKnown RBP10.56□□□□□ -0.72
USB1-216ENST00000624720 TOM1L2Q6ZVM7 507 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 AMOTL1Q8IY63 956 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 MTRQ99707 1265 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 ANKIB1Q9P2G1 1089 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 FBXO9Q9UK97 447 aaPredicted RBP10.56□□□□□ -0.72
USB1-216ENST00000624720 DIS3Q9Y2L1 958 aaKnown RBP10.56□□□□□ -0.72
USB1-216ENST00000624720 KDM2BQ8NHM5 1336 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 ST5P78524 1137 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 LAMB3Q13751 1172 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 PDE3AQ14432 1141 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 RRP12Q5JTH9 1297 aaKnown RBP10.56□□□□□ -0.72
USB1-216ENST00000624720 C1orf141Q5JVX7 400 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 CCDC80Q76M96 950 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 RAPGEF4Q8WZA2 1011 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 BHMTQ93088 406 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 CCDC47Q96A33 483 aaKnown RBP10.56□□□□□ -0.72
USB1-216ENST00000624720 TSGA10Q9BZW7 698 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 LRRC27Q9C0I9 530 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 MKS1Q9NXB0 559 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 MCM8Q9UJA3 840 aa10.56□□□□□ -0.72
USB1-216ENST00000624720 A0A1B0GUA9 196 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 E2F6O75461 281 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 RTN3O95197 1032 aaPredicted RBP10.55□□□□□ -0.72
USB1-216ENST00000624720 MMEP08473 750 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 SMARCA1P28370 1054 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 PTK7Q13308 1070 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 TADA2BQ86TJ2 420 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 ANKRD13BQ86YJ7 626 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 MRPL50Q8N5N7 158 aaKnown RBP10.55□□□□□ -0.72
USB1-216ENST00000624720 B4GALNT2Q8NHY0 566 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 SPOCK3Q9BQ16 436 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 POLR3GO15318 223 aaPredicted RBP10.55□□□□□ -0.72
USB1-216ENST00000624720 IQCB1Q15051 598 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 PKN1Q16512 942 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 SCLT1Q96NL6 688 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 MST1RQ04912 1400 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 CFAP69A5D8W1 941 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 SMTNL1A8MU46 457 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 WDHD1O75717 1129 aaPredicted RBP10.55□□□□□ -0.72
USB1-216ENST00000624720 ACTN2P35609 894 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 EVA1CP58658 441 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 AIMP1Q12904 312 aaKnown RBP10.55□□□□□ -0.72
USB1-216ENST00000624720 TMED1Q13445 227 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 NAA30Q147X3 362 aaPredicted RBP10.55□□□□□ -0.72
USB1-216ENST00000624720 CWC27Q6UX04 472 aaKnown RBP10.55□□□□□ -0.72
USB1-216ENST00000624720 PMM1Q92871 262 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 UBAP1Q9NZ09 502 aa10.55□□□□□ -0.72
USB1-216ENST00000624720 ZNF330Q9Y3S2 320 aaPredicted RBP10.55□□□□□ -0.72
USB1-216ENST00000624720 UNCXA6NJT0 531 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 CHL1O00533 1208 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 TOM1O60784 492 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms