RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 RPRD2Q5VT52 1461 aaKnown RBP10.12□□□□□ -0.79
CDKL5-206ENST00000623610 ATP9BO43861 1147 aa10.12□□□□□ -0.79
CDKL5-206ENST00000623610 INMTO95050 263 aa10.12□□□□□ -0.79
CDKL5-206ENST00000623610 IL4RP24394 825 aa10.12□□□□□ -0.79
CDKL5-206ENST00000623610 TSHZ3Q63HK5 1081 aa10.12□□□□□ -0.79
CDKL5-206ENST00000623610 GLYCTKQ8IVS8 523 aa10.12□□□□□ -0.79
CDKL5-206ENST00000623610 STK11IPQ8N1F8 1099 aa10.12□□□□□ -0.79
CDKL5-206ENST00000623610 L3MBTL3Q96JM7 780 aaPredicted RBP10.12□□□□□ -0.79
CDKL5-206ENST00000623610 MRS2Q9HD23 443 aa10.12□□□□□ -0.79
CDKL5-206ENST00000623610 XPO7Q9UIA9 1087 aaKnown RBP10.12□□□□□ -0.79
CDKL5-206ENST00000623610 FAM221BA6H8Z2 402 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 TMEM110-MUSTN1A8MSY1 372 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 SMTNL1A8MU46 457 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 SNX2O60749 519 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 BAIAP3O94812 1187 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 TNFAIP3P21580 790 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 CHMP4BP1P59074 171 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 BPIFB3P59826 476 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 CCDC15Q0P6D6 951 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 IDI1Q13907 227 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 CRTC2Q53ET0 693 aaPredicted RBP10.11□□□□□ -0.79
CDKL5-206ENST00000623610 WDR45BQ5MNZ6 344 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 PPP4R3AQ6IN85 833 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 OR8H2Q8N162 312 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 ZNF710Q8N1W2 664 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 NLRP7Q8WX94 980 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 RPGRQ92834 1020 aaKnown RBP10.11□□□□□ -0.79
CDKL5-206ENST00000623610 CLP1Q92989 425 aaKnown RBP10.11□□□□□ -0.79
CDKL5-206ENST00000623610 SPAG5Q96R06 1193 aa10.11□□□□□ -0.79
CDKL5-206ENST00000623610 FAM217BQ9NTX9 383 aaPredicted RBP10.11□□□□□ -0.79
CDKL5-206ENST00000623610 ESYT3A0FGR9 886 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 HNRNPCP07910 306 aaKnown RBP eCLIP10.1□□□□□ -0.79
CDKL5-206ENST00000623610 SARSP49591 514 aaKnown RBP10.1□□□□□ -0.79
CDKL5-206ENST00000623610 EPHB1P54762 984 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 SFSWAPQ12872 951 aaKnown RBP10.1□□□□□ -0.79
CDKL5-206ENST00000623610 RASGRP2Q7LDG7 609 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 ZNF396Q96N95 335 aaPredicted RBP10.1□□□□□ -0.79
CDKL5-206ENST00000623610 MRGBPQ9NV56 204 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 CHCHD3Q9NX63 227 aaKnown RBP10.1□□□□□ -0.79
CDKL5-206ENST00000623610 TRMT1Q9NXH9 659 aaKnown RBP10.1□□□□□ -0.79
CDKL5-206ENST00000623610 PIK3C2BO00750 1634 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 RPL17P18621 184 aaKnown RBP10.1□□□□□ -0.79
CDKL5-206ENST00000623610 ENPP1P22413 925 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 MCL1Q07820 350 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 MORC3Q14149 939 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 PARP10Q53GL7 1025 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 PRPF38BQ5VTL8 546 aaKnown RBP10.1□□□□□ -0.79
CDKL5-206ENST00000623610 KIAA0907Q7Z7F0 614 aaPredicted RBP10.1□□□□□ -0.79
CDKL5-206ENST00000623610 UBR1Q8IWV7 1749 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 RGL4Q8IZJ4 473 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 THEMISQ8N1K5 641 aaPredicted RBP10.1□□□□□ -0.79
CDKL5-206ENST00000623610 IPCEF1Q8WWN9 437 aaPredicted RBP10.1□□□□□ -0.79
CDKL5-206ENST00000623610 SNX21Q969T3 373 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 SIN3AQ96ST3 1273 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 HOXC10Q9NYD6 342 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 ATP8A1Q9Y2Q0 1164 aa10.1□□□□□ -0.79
CDKL5-206ENST00000623610 PLA2R1Q13018 1463 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 H0Y3Z8 333 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 NBNO60934 754 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 TRIM37O94972 964 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 NEFHP12036 1026 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 POU3F3P20264 500 aaPredicted RBP10.09□□□□□ -0.79
CDKL5-206ENST00000623610 UBA7P41226 1012 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 IL31Q6EBC2 164 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 CKAP2LQ8IYA6 745 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 SMCR8Q8TEV9 937 aaPredicted RBP10.09□□□□□ -0.79
CDKL5-206ENST00000623610 AGAP3Q96P47 875 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 SNTG2Q9NY99 539 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 GYS1P13807 737 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 NEK3P51956 506 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 AGAP9Q5VTM2 703 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 UNC5DQ6UXZ4 953 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 FAM43AQ8N2R8 423 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 NUDT16Q96DE0 195 aaKnown RBP10.09□□□□□ -0.79
CDKL5-206ENST00000623610 TRMT2BQ96GJ1 504 aaKnown RBP10.09□□□□□ -0.79
CDKL5-206ENST00000623610 VTI1BQ9UEU0 232 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 IPPQ9Y573 584 aa10.09□□□□□ -0.79
CDKL5-206ENST00000623610 ICMTO60725 284 aa10.08□□□□□ -0.8
CDKL5-206ENST00000623610 IFIT2P09913 472 aaKnown RBP10.08□□□□□ -0.8
CDKL5-206ENST00000623610 XBP1P17861 261 aa10.08□□□□□ -0.8
CDKL5-206ENST00000623610 HALP42357 657 aa10.08□□□□□ -0.8
CDKL5-206ENST00000623610 RAB27AP51159 221 aa10.08□□□□□ -0.8
CDKL5-206ENST00000623610 ARHGAP4P98171 946 aa10.08□□□□□ -0.8
CDKL5-206ENST00000623610 TKFCQ3LXA3 575 aa10.08□□□□□ -0.8
CDKL5-206ENST00000623610 MAATS1Q7Z4T9 603 aa10.08□□□□□ -0.8
CDKL5-206ENST00000623610 ELOA2Q8IYF1 753 aaPredicted RBP10.08□□□□□ -0.8
CDKL5-206ENST00000623610 ARL10Q8N8L6 244 aa10.08□□□□□ -0.8
CDKL5-206ENST00000623610 EMILIN1Q9Y6C2 1016 aa10.08□□□□□ -0.8
CDKL5-206ENST00000623610 SLC4A3P48751 1232 aa10.07□□□□□ -0.8
CDKL5-206ENST00000623610 PUM3Q15397 648 aaKnown RBP10.07□□□□□ -0.8
CDKL5-206ENST00000623610 QPCTQ16769 361 aa10.07□□□□□ -0.8
CDKL5-206ENST00000623610 LVRNQ6Q4G3 990 aa10.07□□□□□ -0.8
CDKL5-206ENST00000623610 STAG2Q8N3U4 1231 aa10.07□□□□□ -0.8
CDKL5-206ENST00000623610 MIGA1Q8NAN2 632 aa10.07□□□□□ -0.8
CDKL5-206ENST00000623610 KIF12Q96FN5 646 aa10.07□□□□□ -0.8
CDKL5-206ENST00000623610 HMX1Q9NP08 348 aaPredicted RBP10.07□□□□□ -0.8
CDKL5-206ENST00000623610 ZIM2Q9NZV7 527 aa10.07□□□□□ -0.8
CDKL5-206ENST00000623610 DDX41Q9UJV9 622 aaKnown RBP10.07□□□□□ -0.8
CDKL5-206ENST00000623610 RRP15Q9Y3B9 282 aaKnown RBP10.07□□□□□ -0.8
CDKL5-206ENST00000623610 AGR2O95994 175 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms