RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 GRIK5Q16478 980 aa13.87□□□□□ -0.19
LINC00963-214ENST00000622680 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
LINC00963-214ENST00000622680 ANKRD13AQ8IZ07 590 aa13.87□□□□□ -0.19
LINC00963-214ENST00000622680 TDRD7Q8NHU6 1098 aaKnown RBP13.87□□□□□ -0.19
LINC00963-214ENST00000622680 KAZALD1Q96I82 304 aa13.87□□□□□ -0.19
LINC00963-214ENST00000622680 PTPN18Q99952 460 aa13.87□□□□□ -0.19
LINC00963-214ENST00000622680 OPTNQ96CV9 577 aa13.86□□□□□ -0.19
LINC00963-214ENST00000622680 FAM84BQ96KN1 310 aaPredicted RBP13.86□□□□□ -0.19
LINC00963-214ENST00000622680 TEPSINQ96N21 525 aa13.86□□□□□ -0.19
LINC00963-214ENST00000622680 TMEM39BQ9GZU3 492 aa13.86□□□□□ -0.19
LINC00963-214ENST00000622680 CDK5RAP2Q96SN8 1893 aa13.86□□□□□ -0.19
LINC00963-214ENST00000622680 MYO5AQ9Y4I1 1855 aaKnown RBP13.85□□□□□ -0.19
LINC00963-214ENST00000622680 ALDH1L1O75891 902 aa13.85□□□□□ -0.19
LINC00963-214ENST00000622680 NBPF7P0C2Y1 421 aaPredicted RBP13.85□□□□□ -0.19
LINC00963-214ENST00000622680 HIBADHP31937 336 aaKnown RBP13.85□□□□□ -0.19
LINC00963-214ENST00000622680 CRKP46108 304 aa13.85□□□□□ -0.19
LINC00963-214ENST00000622680 CHAF1AQ13111 956 aaPredicted RBP13.85□□□□□ -0.19
LINC00963-214ENST00000622680 TNFAIP1Q13829 316 aa13.85□□□□□ -0.19
LINC00963-214ENST00000622680 UBE4AQ14139 1066 aa13.85□□□□□ -0.19
LINC00963-214ENST00000622680 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.85□□□□□ -0.19
LINC00963-214ENST00000622680 DZIP1LQ8IYY4 767 aaKnown RBP13.85□□□□□ -0.19
LINC00963-214ENST00000622680 ERO1AQ96HE7 468 aa13.85□□□□□ -0.19
LINC00963-214ENST00000622680 SRCIN1Q9C0H9 1055 aa13.85□□□□□ -0.19
LINC00963-214ENST00000622680 SERPINA10Q9UK55 444 aa13.85□□□□□ -0.19
LINC00963-214ENST00000622680 PTPN22Q9Y2R2 807 aa13.85□□□□□ -0.19
LINC00963-214ENST00000622680 UNCXA6NJT0 531 aa13.84□□□□□ -0.19
LINC00963-214ENST00000622680 CACNB3P54284 484 aa13.84□□□□□ -0.19
LINC00963-214ENST00000622680 VGLL4Q14135 290 aa13.84□□□□□ -0.19
LINC00963-214ENST00000622680 LRRC24Q50LG9 513 aa13.84□□□□□ -0.19
LINC00963-214ENST00000622680 MS4A4AQ96JQ5 239 aa13.84□□□□□ -0.19
LINC00963-214ENST00000622680 BICC1Q9H694 974 aaKnown RBP13.84□□□□□ -0.19
LINC00963-214ENST00000622680 PCDH10Q9P2E7 1040 aa13.84□□□□□ -0.19
LINC00963-214ENST00000622680 ALPK3Q96L96 1907 aa13.84□□□□□ -0.19
LINC00963-214ENST00000622680 TESPA1A2RU30 521 aaPredicted RBP13.83□□□□□ -0.2
LINC00963-214ENST00000622680 SP3Q02447 781 aa13.83□□□□□ -0.2
LINC00963-214ENST00000622680 OTUD7BQ6GQQ9 843 aa13.83□□□□□ -0.2
LINC00963-214ENST00000622680 BRI3BPQ8WY22 251 aa13.83□□□□□ -0.2
LINC00963-214ENST00000622680 OTUD5Q96G74 571 aa13.83□□□□□ -0.2
LINC00963-214ENST00000622680 EFCC1Q9HA90 598 aa13.83□□□□□ -0.2
LINC00963-214ENST00000622680 RIPOR2Q9Y4F9 1068 aa13.83□□□□□ -0.2
LINC00963-214ENST00000622680 CCL15-CCL14A0A0B4J2E2 113 aa13.82□□□□□ -0.2
LINC00963-214ENST00000622680 TAF1CQ15572 869 aaPredicted RBP13.82□□□□□ -0.2
LINC00963-214ENST00000622680 CCL15Q16663 113 aa13.82□□□□□ -0.2
LINC00963-214ENST00000622680 FAM9BQ8IZU0 186 aa13.82□□□□□ -0.2
LINC00963-214ENST00000622680 ANKRD44Q8N8A2 993 aa13.82□□□□□ -0.2
LINC00963-214ENST00000622680 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC00963-214ENST00000622680 KLHDC4Q8TBB5 520 aa13.82□□□□□ -0.2
LINC00963-214ENST00000622680 MROH5Q6ZUA9 1318 aa13.82□□□□□ -0.2
LINC00963-214ENST00000622680 SZT2Q5T011 3432 aa13.81□□□□□ -0.2
LINC00963-214ENST00000622680 ANP32CO43423 234 aa13.81□□□□□ -0.2
LINC00963-214ENST00000622680 METTL24Q5JXM2 366 aa13.81□□□□□ -0.2
LINC00963-214ENST00000622680 FBXO33Q7Z6M2 555 aa13.81□□□□□ -0.2
LINC00963-214ENST00000622680 VPS37DQ86XT2 251 aa13.81□□□□□ -0.2
LINC00963-214ENST00000622680 FAM43AQ8N2R8 423 aa13.81□□□□□ -0.2
LINC00963-214ENST00000622680 VGLL2Q8N8G2 317 aa13.81□□□□□ -0.2
LINC00963-214ENST00000622680 RANBP2P49792 3224 aaKnown RBP13.81□□□□□ -0.2
LINC00963-214ENST00000622680 UTYO14607 1347 aa13.81□□□□□ -0.2
LINC00963-214ENST00000622680 FRAT2O75474 233 aaPredicted RBP13.8□□□□□ -0.2
LINC00963-214ENST00000622680 EN2P19622 333 aaPredicted RBP13.8□□□□□ -0.2
LINC00963-214ENST00000622680 TNNI2P48788 182 aa13.8□□□□□ -0.2
LINC00963-214ENST00000622680 RABL6Q3YEC7 729 aaPredicted RBP13.8□□□□□ -0.2
LINC00963-214ENST00000622680 INTS3Q68E01 1043 aaKnown RBP13.8□□□□□ -0.2
LINC00963-214ENST00000622680 ARMC5Q96C12 935 aa13.8□□□□□ -0.2
LINC00963-214ENST00000622680 CSADQ9Y600 493 aa13.8□□□□□ -0.2
LINC00963-214ENST00000622680 PTCH2Q9Y6C5 1203 aa13.8□□□□□ -0.2
LINC00963-214ENST00000622680 SNCAIPQ9Y6H5 919 aa13.8□□□□□ -0.2
LINC00963-214ENST00000622680 FOCADQ5VW36 1801 aa13.79□□□□□ -0.2
LINC00963-214ENST00000622680 BCAMP50895 628 aa13.79□□□□□ -0.2
LINC00963-214ENST00000622680 GTF2A2P52657 109 aa13.79□□□□□ -0.2
LINC00963-214ENST00000622680 MAP3K9P80192 1104 aa13.79□□□□□ -0.2
LINC00963-214ENST00000622680 TEKT1Q969V4 418 aa13.79□□□□□ -0.2
LINC00963-214ENST00000622680 WRNIP1Q96S55 665 aa13.79□□□□□ -0.2
LINC00963-214ENST00000622680 ARHGAP39Q9C0H5 1083 aa13.79□□□□□ -0.2
LINC00963-214ENST00000622680 SPDYE5A6NIY4 337 aa13.78□□□□□ -0.2
LINC00963-214ENST00000622680 ECM2O94769 699 aaPredicted RBP13.78□□□□□ -0.2
LINC00963-214ENST00000622680 MYCP01106 439 aaPredicted RBP13.78□□□□□ -0.2
LINC00963-214ENST00000622680 CAVIN4Q5BKX8 364 aa13.78□□□□□ -0.2
LINC00963-214ENST00000622680 TBC1D22AQ8WUA7 517 aa13.78□□□□□ -0.2
LINC00963-214ENST00000622680 ZKSCAN4Q969J2 545 aaPredicted RBP13.78□□□□□ -0.2
LINC00963-214ENST00000622680 ZNF333Q96JL9 665 aa13.78□□□□□ -0.2
LINC00963-214ENST00000622680 ZFYVE28Q9HCC9 887 aa13.78□□□□□ -0.2
LINC00963-214ENST00000622680 RPAP1Q9BWH6 1393 aaPredicted RBP13.78□□□□□ -0.2
LINC00963-214ENST00000622680 LOC285556D6RIA3 1793 aa13.77□□□□□ -0.21
LINC00963-214ENST00000622680 PDE8BO95263 885 aa13.77□□□□□ -0.21
LINC00963-214ENST00000622680 SLC9C1Q4G0N8 1177 aa13.77□□□□□ -0.21
LINC00963-214ENST00000622680 MRPL50Q8N5N7 158 aaKnown RBP13.77□□□□□ -0.21
LINC00963-214ENST00000622680 ZNF521Q96K83 1311 aa13.77□□□□□ -0.21
LINC00963-214ENST00000622680 TMOD2Q9NZR1 351 aa13.77□□□□□ -0.21
LINC00963-214ENST00000622680 SIPA1L1O43166 1804 aa13.76□□□□□ -0.21
LINC00963-214ENST00000622680 MAST2Q6P0Q8 1798 aa13.76□□□□□ -0.21
LINC00963-214ENST00000622680 BTBD19C9JJ37 291 aa13.76□□□□□ -0.21
LINC00963-214ENST00000622680 IRF6O14896 467 aa13.76□□□□□ -0.21
LINC00963-214ENST00000622680 HDLBPQ00341 1268 aaKnown RBP13.76□□□□□ -0.21
LINC00963-214ENST00000622680 HABP4Q5JVS0 413 aaKnown RBP13.76□□□□□ -0.21
LINC00963-214ENST00000622680 APOBEC3HQ6NTF7 200 aaKnown RBP13.76□□□□□ -0.21
LINC00963-214ENST00000622680 ZDHHC15Q96MV8 337 aa13.76□□□□□ -0.21
LINC00963-214ENST00000622680 MAST3O60307 1309 aa13.75□□□□□ -0.21
LINC00963-214ENST00000622680 FGFR2P21802 821 aa13.75□□□□□ -0.21
LINC00963-214ENST00000622680 PUM3Q15397 648 aaKnown RBP13.75□□□□□ -0.21
LINC00963-214ENST00000622680 MIGA2Q7L4E1 593 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms