RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 ATG3Q9NT62 314 aa15.05■□□□□ 0
CHD1L-210ENST00000622533 RTEL1Q9NZ71 1219 aa15.05■□□□□ 0
CHD1L-210ENST00000622533 RRP15Q9Y3B9 282 aaKnown RBP15.05■□□□□ 0
CHD1L-210ENST00000622533 LAMA4Q16363 1823 aa15.05■□□□□ -0
CHD1L-210ENST00000622533 TRPM3Q9HCF6 1732 aaPredicted RBP15.05■□□□□ -0
CHD1L-210ENST00000622533 TMEM94Q12767 1356 aa15.05■□□□□ -0
CHD1L-210ENST00000622533 E7EWF7 191 aa15.05■□□□□ -0
CHD1L-210ENST00000622533 GUCY1B3Q02153 619 aa15.05■□□□□ -0
CHD1L-210ENST00000622533 ISM2Q6H9L7 571 aa15.05■□□□□ -0
CHD1L-210ENST00000622533 DCAF5Q96JK2 942 aa15.05■□□□□ -0
CHD1L-210ENST00000622533 ADAM21Q9UKJ8 722 aa15.05■□□□□ -0
CHD1L-210ENST00000622533 ARFGEF2Q9Y6D5 1785 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 NRDCO43847 1150 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 TUBB4AP04350 444 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 IL15P40933 162 aaPredicted RBP15.04■□□□□ -0
CHD1L-210ENST00000622533 CASP7P55210 303 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 SRLQ86TD4 932 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 KCNG4Q8TDN1 519 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.04■□□□□ -0
CHD1L-210ENST00000622533 A0A1B0GVL5 298 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 EFCAB8A8MWE9 144 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 H3BQF6 201 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 PDIA3P30101 505 aaKnown RBP15.04■□□□□ -0
CHD1L-210ENST00000622533 GTF2A1P52655 376 aaPredicted RBP15.04■□□□□ -0
CHD1L-210ENST00000622533 CCDC158Q5M9N0 1113 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 FBXO18Q8NFZ0 1043 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 UTP14AQ9BVJ6 771 aaKnown RBP15.04■□□□□ -0
CHD1L-210ENST00000622533 PARP3Q9Y6F1 533 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 KIF1AQ12756 1690 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 CARMIL3Q8ND23 1372 aa15.04■□□□□ -0
CHD1L-210ENST00000622533 GOLIM4O00461 696 aa15.03■□□□□ -0
CHD1L-210ENST00000622533 HSPD1P10809 573 aaKnown RBP15.03■□□□□ -0
CHD1L-210ENST00000622533 PHLPP2Q6ZVD8 1323 aa15.03■□□□□ -0
CHD1L-210ENST00000622533 RNF113AO15541 343 aaKnown RBP15.03■□□□□ -0
CHD1L-210ENST00000622533 LMOD1P29536 600 aaPredicted RBP15.03■□□□□ -0
CHD1L-210ENST00000622533 LMBR1LQ6UX01 489 aa15.03■□□□□ -0
CHD1L-210ENST00000622533 FMR1NBQ8N0W7 255 aaPredicted RBP15.03■□□□□ -0
CHD1L-210ENST00000622533 ORAI2Q96SN7 254 aa15.03■□□□□ -0
CHD1L-210ENST00000622533 CWC15Q9P013 229 aaKnown RBP15.03■□□□□ -0
CHD1L-210ENST00000622533 NDUFB9Q9Y6M9 179 aa15.03■□□□□ -0
CHD1L-210ENST00000622533 YEATS4O95619 227 aa15.03■□□□□ -0
CHD1L-210ENST00000622533 CCT2P78371 535 aaKnown RBP15.03■□□□□ -0
CHD1L-210ENST00000622533 FOXR1Q6PIV2 292 aa15.03■□□□□ -0
CHD1L-210ENST00000622533 KRT28Q7Z3Y7 464 aa15.03■□□□□ -0
CHD1L-210ENST00000622533 BRAPQ7Z569 592 aa15.03■□□□□ -0
CHD1L-210ENST00000622533 AK7Q96M32 723 aa15.03■□□□□ -0
CHD1L-210ENST00000622533 NEUROD6Q96NK8 337 aa15.03■□□□□ -0
CHD1L-210ENST00000622533 GOLGA5Q8TBA6 731 aa15.02■□□□□ -0
CHD1L-210ENST00000622533 PARD6BQ9BYG5 372 aa15.02■□□□□ -0
CHD1L-210ENST00000622533 TOMM22Q9NS69 142 aa15.02■□□□□ -0
CHD1L-210ENST00000622533 NLRP2Q9NX02 1062 aa15.02■□□□□ -0
CHD1L-210ENST00000622533 ZNF142P52746 1687 aaPredicted RBP15.02■□□□□ -0
CHD1L-210ENST00000622533 H7C1W4 665 aa15.02□□□□□ -0.01
CHD1L-210ENST00000622533 ATP1A3P13637 1013 aa15.02□□□□□ -0.01
CHD1L-210ENST00000622533 KCNJ6P48051 423 aa15.02□□□□□ -0.01
CHD1L-210ENST00000622533 FUT8Q9BYC5 575 aa15.02□□□□□ -0.01
CHD1L-210ENST00000622533 ZSWIM4Q9H7M6 989 aa15.02□□□□□ -0.01
CHD1L-210ENST00000622533 ARFGAP3Q9NP61 516 aa15.02□□□□□ -0.01
CHD1L-210ENST00000622533 PCDHA7Q9UN72 937 aa15.02□□□□□ -0.01
CHD1L-210ENST00000622533 ANKRD65E5RJM6 399 aa15.01□□□□□ -0.01
CHD1L-210ENST00000622533 SF3A1Q15459 793 aaKnown RBP15.01□□□□□ -0.01
CHD1L-210ENST00000622533 POLR3EQ9NVU0 708 aa15.01□□□□□ -0.01
CHD1L-210ENST00000622533 LAMB4A4D0S4 1761 aa15.01□□□□□ -0.01
CHD1L-210ENST00000622533 CIAO1O76071 339 aa15.01□□□□□ -0.01
CHD1L-210ENST00000622533 IFIT1P09914 478 aaKnown RBP15.01□□□□□ -0.01
CHD1L-210ENST00000622533 FOXO4P98177 505 aa15.01□□□□□ -0.01
CHD1L-210ENST00000622533 STK38Q15208 465 aa15.01□□□□□ -0.01
CHD1L-210ENST00000622533 ATG9AQ7Z3C6 839 aa15.01□□□□□ -0.01
CHD1L-210ENST00000622533 KIAA1468Q9P260 1216 aa15.01□□□□□ -0.01
CHD1L-210ENST00000622533 ATP5J2-PTCD1G3V325 749 aa15□□□□□ -0.01
CHD1L-210ENST00000622533 PTCD1O75127 700 aaKnown RBP15□□□□□ -0.01
CHD1L-210ENST00000622533 WDR24Q96S15 920 aa15□□□□□ -0.01
CHD1L-210ENST00000622533 RGPD5Q99666 1765 aa15□□□□□ -0.01
CHD1L-210ENST00000622533 MAST3O60307 1309 aa15□□□□□ -0.01
CHD1L-210ENST00000622533 LOC102724159A0A0B4J2E5 919 aa15□□□□□ -0.01
CHD1L-210ENST00000622533 ATP8B1O43520 1251 aa15□□□□□ -0.01
CHD1L-210ENST00000622533 ZFYP08048 801 aaPredicted RBP15□□□□□ -0.01
CHD1L-210ENST00000622533 NDUFA8P51970 172 aa15□□□□□ -0.01
CHD1L-210ENST00000622533 PWP2Q15269 919 aaKnown RBP15□□□□□ -0.01
CHD1L-210ENST00000622533 ILDR1Q86SU0 546 aaPredicted RBP15□□□□□ -0.01
CHD1L-210ENST00000622533 LINC00301Q8NCQ3 95 aa15□□□□□ -0.01
CHD1L-210ENST00000622533 DPF2Q92785 391 aa15□□□□□ -0.01
CHD1L-210ENST00000622533 SRRTQ9BXP5 876 aaKnown RBP15□□□□□ -0.01
CHD1L-210ENST00000622533 CWC25Q9NXE8 425 aaPredicted RBP15□□□□□ -0.01
CHD1L-210ENST00000622533 CCP110O43303 1012 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 CHGBP05060 677 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 ACTN2P35609 894 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 ICE2Q659A1 982 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 EXOC4Q96A65 974 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 C8orf76Q96K31 380 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 NCOA5Q9HCD5 579 aaKnown RBP14.99□□□□□ -0.01
CHD1L-210ENST00000622533 VPS18Q9P253 973 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 EYA2O00167 538 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 TPM1P09493 284 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 FANCCQ00597 558 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 PPP2R3AQ06190 1150 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 IMMTQ16891 758 aaKnown RBP14.99□□□□□ -0.01
CHD1L-210ENST00000622533 WDR19Q8NEZ3 1342 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 GNG11P61952 73 aa14.99□□□□□ -0.01
CHD1L-210ENST00000622533 LONRF2Q1L5Z9 754 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms