RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 GOLGA1Q92805 767 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 KCNB2Q92953 911 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 SUCLG2Q96I99 432 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 MPHOSPH8Q99549 860 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 ZSWIM6Q9HCJ5 1215 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 MYH15Q9Y2K3 1946 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 PHRF1Q9P1Y6 1649 aaKnown RBP8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 RNMTO43148 476 aaKnown RBP8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 ERLIN1O75477 346 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 SASH1O94885 1247 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 USP5P45974 858 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 RWDD2BP57060 319 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 KRT85P78386 507 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 TEFQ10587 303 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 TRAF1Q13077 416 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 NMIQ13287 307 aaPredicted RBP8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 PLEKHO1Q53GL0 409 aaPredicted RBP8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 HSP90AB4PQ58FF6 505 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 AKAP4Q5JQC9 854 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 GORABQ5T7V8 394 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 PIAS4Q8N2W9 510 aaPredicted RBP8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 TCEANC2Q96MN5 208 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 PDE11AQ9HCR9 933 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 SPATS2LQ9NUQ6 558 aaKnown RBP8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 TPCN1Q9ULQ1 816 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 RBM8AQ9Y5S9 174 aaKnown RBP8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 PARP3Q9Y6F1 533 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 SIPA1L3O60292 1781 aaPredicted RBP8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 A0A0D9SFI3 127 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 GIGYF1O75420 1035 aaPredicted RBP8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 ARID4AP29374 1257 aaPredicted RBP8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 TXLNAP40222 546 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 TUBB4BP68371 445 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 TBC1D8BQ0IIM8 1120 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 NECTIN1Q15223 517 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 HSP90B2PQ58FF3 399 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 VPS53Q5VIR6 699 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 CREB3L3Q68CJ9 461 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 WWC2Q6AWC2 1192 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 TTC19Q6DKK2 380 aaPredicted RBP8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 FCHSD1Q86WN1 690 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 HOMER1Q86YM7 354 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 AMOTL1Q8IY63 956 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 THEMISQ8N1K5 641 aaPredicted RBP8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 CLASRPQ8N2M8 674 aaKnown RBP8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 CTCFLQ8NI51 663 aaPredicted RBP8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 BICD2Q8TD16 824 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 EAF2Q96CJ1 260 aaPredicted RBP8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 PARD6BQ9BYG5 372 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 DNAJC25Q9H1X3 360 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 DBF4Q9UBU7 674 aaPredicted RBP8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 FAN1Q9Y2M0 1017 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 HEG1Q9ULI3 1381 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 NPHP4O75161 1426 aaPredicted RBP8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 NCAPD2Q15021 1401 aa8.6□□□□□ -1.03
TRIM49B-202ENST00000622138 A0A1B0GUA9 196 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 VPS37CA5D8V6 355 aaPredicted RBP8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 URI1O94763 535 aaPredicted RBP8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 IFIT2P09913 472 aaKnown RBP8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 PPP2R3AQ06190 1150 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 WLSQ5T9L3 541 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 FAM173BQ6P4H8 233 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 CDC37L1Q7L3B6 337 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 CEP112Q8N8E3 955 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 KLHDC4Q8TBB5 520 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 JPH2Q9BR39 696 aaPredicted RBP8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 CCDC8Q9H0W5 538 aaPredicted RBP8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 BICC1Q9H694 974 aaKnown RBP8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 C9orf78Q9NZ63 289 aaPredicted RBP8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 C5P01031 1676 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 EXOC5O00471 708 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 ALDH1L1O75891 902 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 PAX7P23759 505 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 LIG3P49916 1009 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 PDCD2Q16342 344 aaPredicted RBP8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 STX1AQ16623 288 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 KSR2Q6VAB6 950 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 ANKRD18AQ8IVF6 992 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 CKAP2LQ8IYA6 745 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 ARMC2Q8NEN0 867 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 CCDC26Q8TAB7 109 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 TM6SF1Q9BZW5 370 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 GBP3Q9H0R5 595 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 SLC24A3Q9HC58 644 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 ZBTB12Q9Y330 459 aaPredicted RBP8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 USP16Q9Y5T5 823 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 MRFAP1Q9Y605 127 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 CYP46A1Q9Y6A2 500 aa8.59□□□□□ -1.03
TRIM49B-202ENST00000622138 MED23Q9ULK4 1368 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 GOLGA6L9A6NEM1 432 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 SLC27A2O14975 620 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 SFPQP23246 707 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 INPP5BP32019 993 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 GNL2Q13823 731 aaKnown RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 FBXW10Q5XX13 1052 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 TRIM65Q6PJ69 517 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 TTC6Q86TZ1 520 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 ZNF589Q86UQ0 364 aaPredicted RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 FERMT3Q86UX7 667 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 AFAP1L1Q8TED9 768 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms