RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, human

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-223	ENST00000620507	MROH5	Q6ZUA9	1318 aa		10.65	□□□□□ -0.7
RBFOX1-223	ENST00000620507	CBFA2T2	O43439	604 aa		10.65	□□□□□ -0.7
RBFOX1-223	ENST00000620507	NEMF	O60524	1076 aa		10.65	□□□□□ -0.7
RBFOX1-223	ENST00000620507	PARP10	Q53GL7	1025 aa		10.65	□□□□□ -0.7
RBFOX1-223	ENST00000620507	USPL1	Q5W0Q7	1092 aa		10.65	□□□□□ -0.7
RBFOX1-223	ENST00000620507	SPATA5	Q8NB90	893 aa		10.65	□□□□□ -0.7
RBFOX1-223	ENST00000620507	ANKRD20A12P	Q8NF67	263 aa		10.65	□□□□□ -0.7
RBFOX1-223	ENST00000620507	SMARCC1	Q92922	1105 aa	Predicted RBP	10.65	□□□□□ -0.7
RBFOX1-223	ENST00000620507	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.65	□□□□□ -0.7
RBFOX1-223	ENST00000620507	ARMT1	Q9H993	441 aa		10.65	□□□□□ -0.7
RBFOX1-223	ENST00000620507	DACH1	Q9UI36	760 aa		10.65	□□□□□ -0.7
RBFOX1-223	ENST00000620507	TNNT1	P13805	278 aa		10.65	□□□□□ -0.71
RBFOX1-223	ENST00000620507	TICAM2	Q86XR7	235 aa		10.65	□□□□□ -0.71
RBFOX1-223	ENST00000620507	C17orf53	Q8N3J3	647 aa	Predicted RBP	10.65	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ESR2	Q92731	530 aa		10.65	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ISCA1	Q9BUE6	129 aa		10.65	□□□□□ -0.71
RBFOX1-223	ENST00000620507	PUS7L	Q9H0K6	701 aa	Known RBP	10.65	□□□□□ -0.71
RBFOX1-223	ENST00000620507	PDE6A	P16499	860 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	PHKA1	P46020	1223 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	PTPN14	Q15678	1187 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	CATIP	Q7Z7H3	387 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	SYNE4	Q8N205	404 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	TTLL11	Q8NHH1	800 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	KCNB2	Q92953	911 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	HLF	Q16534	295 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	CTCFL	Q8NI51	663 aa	Predicted RBP	10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	BBX	Q8WY36	941 aa	Predicted RBP	10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	NGLY1	Q96IV0	654 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ZKSCAN3	Q9BRR0	538 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	PDCL3	Q9H2J4	239 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	CACNA1F	O60840	1977 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ANO1	Q5XXA6	986 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	PHKB	Q93100	1093 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ZNF609	O15014	1411 aa		10.64	□□□□□ -0.71
RBFOX1-223	ENST00000620507	IL6ST	P40189	918 aa	Predicted RBP	10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	REST	Q13127	1097 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	HOMEZ	Q8IX15	550 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	TRMT1	Q9NXH9	659 aa	Known RBP	10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	NFAT5	O94916	1531 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ADD1	P35611	737 aa	Known RBP	10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	GSDMD	P57764	484 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	MYL10	Q9BUA6	226 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	MRVI1	Q9Y6F6	885 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	MST1R	Q04912	1400 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	MAGEB6P1	A0A0J9YX57	407 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	MARCH6	O60337	910 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	TRIM28	Q13263	835 aa	Known RBP	10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	UBE3C	Q15386	1083 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	MEX3C	Q5U5Q3	659 aa	Known RBP	10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	MYSM1	Q5VVJ2	828 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	TMC6	Q7Z403	805 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	DZIP1	Q86YF9	867 aa	Known RBP	10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	FBXO18	Q8NFZ0	1043 aa		10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ERCC4	Q92889	916 aa	Predicted RBP	10.63	□□□□□ -0.71
RBFOX1-223	ENST00000620507	SKIL	P12757	684 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	TXLNA	P40222	546 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	STOX1	Q6ZVD7	989 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	GPHN	Q9NQX3	736 aa	Predicted RBP	10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	NALCN	Q8IZF0	1738 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	XRN1	Q8IZH2	1706 aa	Known RBP	10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	CCP110	O43303	1012 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ZNF75D	P51815	510 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	CTDSPL2	Q05D32	466 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ADAL	Q6DHV7	355 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	NLRP3	Q96P20	1036 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ANKIB1	Q9P2G1	1089 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	RCOR1	Q9UKL0	485 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	CARMIL3	Q8ND23	1372 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	PATL2	C9JE40	543 aa	Known RBP	10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	YEATS4	O95619	227 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ADD2	P35612	726 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	TERF1	P54274	439 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	TSR1	Q2NL82	804 aa	Known RBP	10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	KRT40	Q6A162	431 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	CCAR2	Q8N163	923 aa	Known RBP	10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	IL17RA	Q96F46	866 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	USP5	P45974	858 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	MNS1	Q8NEH6	495 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	SETDB2	Q96T68	719 aa		10.62	□□□□□ -0.71
RBFOX1-223	ENST00000620507	RGPD1	P0DJD0	1748 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	CPD	O75976	1380 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	PALLD	Q8WX93	1383 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	LMOD1	P29536	600 aa	Predicted RBP	10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	MCAM	P43121	646 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	FILIP1L	Q4L180	1135 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	IFIT1B	Q5T764	474 aa	Known RBP	10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	CCDC47	Q96A33	483 aa	Known RBP	10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	PCDHA7	Q9UN72	937 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	ZNF202	O95125	648 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	IFNL3	Q8IZI9	196 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	NWD1	Q149M9	1564 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	LTN1	O94822	1766 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	TSPY2	A6NKD2	308 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	SCARF1	Q14162	830 aa		10.61	□□□□□ -0.71
RBFOX1-223	ENST00000620507	AKNAD1	Q5T1N1	836 aa		10.61	□□□□□ -0.71

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