RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 NOLC1Q14978 699 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDH23-213ENST00000619887 RTN1Q16799 776 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 LMO7Q8WWI1 1683 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 SERPINC1P01008 464 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 ATG9AQ7Z3C6 839 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.49□□□□□ -0.57
CDH23-213ENST00000619887 CATIPQ7Z7H3 387 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 GREM2Q9H772 168 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 TCEAL9Q9UHQ7 104 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 MBD4O95243 580 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 FGAP02671 866 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 TXLNAP40222 546 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 FILIP1Q7Z7B0 1213 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 HOMER1Q86YM7 354 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 NSUN7Q8NE18 718 aaKnown RBP11.49□□□□□ -0.57
CDH23-213ENST00000619887 PCMTD1Q96MG8 357 aaPredicted RBP11.49□□□□□ -0.57
CDH23-213ENST00000619887 PLA2G12BQ9BX93 195 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 NYXQ9GZU5 481 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 ZBTB1Q9Y2K1 713 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 ZNF532Q9HCE3 1301 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 PDIA3P30101 505 aaKnown RBP11.49□□□□□ -0.57
CDH23-213ENST00000619887 SPATA5Q8NB90 893 aa11.49□□□□□ -0.57
CDH23-213ENST00000619887 AK9Q5TCS8 1911 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 YEATS4O95619 227 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 LIG1P18858 919 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 CTCFLQ8NI51 663 aaPredicted RBP11.48□□□□□ -0.57
CDH23-213ENST00000619887 KIF2AO00139 706 aaPredicted RBP11.48□□□□□ -0.57
CDH23-213ENST00000619887 DTNBO60941 627 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 SYKP43405 635 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 TTLL5Q6EMB2 1281 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 PDLIM2Q96JY6 352 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 RTL9Q8NET4 1388 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 LMTK3Q96Q04 1460 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 M0R2C6 588 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 PDE6AP16499 860 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 HMGB2P26583 209 aaKnown RBP11.48□□□□□ -0.57
CDH23-213ENST00000619887 SPTY2D1Q68D10 685 aaPredicted RBP11.48□□□□□ -0.57
CDH23-213ENST00000619887 CCDC144CPQ8IYA2 1237 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 OSBP2Q969R2 916 aa11.48□□□□□ -0.57
CDH23-213ENST00000619887 TTC12Q9H892 705 aaPredicted RBP11.48□□□□□ -0.57
CDH23-213ENST00000619887 DYNC1I1O14576 645 aa11.47□□□□□ -0.57
CDH23-213ENST00000619887 RANBP6O60518 1105 aaKnown RBP11.47□□□□□ -0.57
CDH23-213ENST00000619887 TSR1Q2NL82 804 aaKnown RBP11.47□□□□□ -0.57
CDH23-213ENST00000619887 CNNM3Q8NE01 707 aa11.47□□□□□ -0.57
CDH23-213ENST00000619887 ZNF609O15014 1411 aa11.47□□□□□ -0.57
CDH23-213ENST00000619887 MAGEB6P1A0A0J9YX57 407 aa11.47□□□□□ -0.57
CDH23-213ENST00000619887 B4E1Z4 1266 aa11.47□□□□□ -0.57
CDH23-213ENST00000619887 RBM5P52756 815 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDH23-213ENST00000619887 RESTQ13127 1097 aa11.47□□□□□ -0.57
CDH23-213ENST00000619887 SF3B2Q13435 895 aaKnown RBP11.47□□□□□ -0.57
CDH23-213ENST00000619887 LUZP1Q86V48 1076 aa11.47□□□□□ -0.57
CDH23-213ENST00000619887 TTLL11Q8NHH1 800 aa11.47□□□□□ -0.57
CDH23-213ENST00000619887 NLRP3Q96P20 1036 aa11.47□□□□□ -0.57
CDH23-213ENST00000619887 DZIP1Q86YF9 867 aaKnown RBP11.47□□□□□ -0.57
CDH23-213ENST00000619887 CCDC82Q8N4S0 544 aa11.47□□□□□ -0.57
CDH23-213ENST00000619887 CCDC112Q8NEF3 446 aa11.47□□□□□ -0.57
CDH23-213ENST00000619887 CRNKL1Q9BZJ0 848 aaKnown RBP11.47□□□□□ -0.57
CDH23-213ENST00000619887 MED1Q15648 1581 aaPredicted RBP11.47□□□□□ -0.57
CDH23-213ENST00000619887 UBAP1LF5GYI3 381 aa11.46□□□□□ -0.57
CDH23-213ENST00000619887 BMP15O95972 392 aa11.46□□□□□ -0.57
CDH23-213ENST00000619887 ADD2P35612 726 aa11.46□□□□□ -0.57
CDH23-213ENST00000619887 ZNF287Q9HBT7 754 aa11.46□□□□□ -0.57
CDH23-213ENST00000619887 CBX8Q9HC52 389 aa11.46□□□□□ -0.57
CDH23-213ENST00000619887 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.57
CDH23-213ENST00000619887 TOM1O60784 492 aa11.46□□□□□ -0.57
CDH23-213ENST00000619887 SFPQP23246 707 aaKnown RBP eCLIP11.46□□□□□ -0.57
CDH23-213ENST00000619887 ANO1Q5XXA6 986 aa11.46□□□□□ -0.57
CDH23-213ENST00000619887 KANK3Q6NY19 840 aa11.46□□□□□ -0.57
CDH23-213ENST00000619887 CCDC186Q7Z3E2 898 aa11.46□□□□□ -0.57
CDH23-213ENST00000619887 FILIP1LQ4L180 1135 aa11.46□□□□□ -0.58
CDH23-213ENST00000619887 NBPF5PQ86XG9 351 aaPredicted RBP11.46□□□□□ -0.58
CDH23-213ENST00000619887 ZNF830Q96NB3 372 aaPredicted RBP11.46□□□□□ -0.58
CDH23-213ENST00000619887 SETDB2Q96T68 719 aa11.46□□□□□ -0.58
CDH23-213ENST00000619887 DENND2AQ9ULE3 1009 aa11.46□□□□□ -0.58
CDH23-213ENST00000619887 ABCC6O95255 1503 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 CALM1P0DP23 149 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 CALM2P0DP24 149 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 CALM3P0DP25 149 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 USP28Q96RU2 1077 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
CDH23-213ENST00000619887 RCOR1Q9UKL0 485 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 CARMIL3Q8ND23 1372 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 ZMYM6O95789 1325 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 WDR19Q8NEZ3 1342 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 PDE4BQ07343 736 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 PPP2R5BQ15173 497 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 ADALQ6DHV7 355 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 ZSCAN29Q8IWY8 852 aaPredicted RBP11.45□□□□□ -0.58
CDH23-213ENST00000619887 ANKRD2Q9GZV1 360 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 KDM3BQ7LBC6 1761 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 USP54Q70EL1 1684 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 PHKA1P46020 1223 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 MYSM1Q5VVJ2 828 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 ARMT1Q9H993 441 aa11.45□□□□□ -0.58
CDH23-213ENST00000619887 THRAP3Q9Y2W1 955 aaKnown RBP11.45□□□□□ -0.58
CDH23-213ENST00000619887 NR1I2O75469 434 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 LDHCP07864 332 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 KIF5BP33176 963 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 CASP7P55210 303 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms