RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 JAK2O60674 1132 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 PDIA3P30101 505 aaKnown RBP22.47■■□□□ 1.19
PSPC1-206ENST00000619300 TRDNQ13061 729 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 GRAPQ13588 217 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 USP48Q86UV5 1035 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 GRAPLQ8TC17 118 aaPredicted RBP22.47■■□□□ 1.19
PSPC1-206ENST00000619300 A0A1B0GUL6 1792 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 MBD3O95983 291 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 CYP7A1P22680 504 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 KLRK1P26718 216 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 HIBADHP31937 336 aaKnown RBP22.47■■□□□ 1.19
PSPC1-206ENST00000619300 CAVIN1Q6NZI2 390 aaKnown RBP22.47■■□□□ 1.19
PSPC1-206ENST00000619300 TMEM87AQ8NBN3 555 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 SMARCC2Q8TAQ2 1214 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 CHMP4CQ96CF2 233 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 RAI14Q9P0K7 980 aa22.47■■□□□ 1.19
PSPC1-206ENST00000619300 GSG1L2A8MUP6 293 aa22.46■■□□□ 1.19
PSPC1-206ENST00000619300 SERPINB2P05120 415 aa22.46■■□□□ 1.19
PSPC1-206ENST00000619300 TBC1D10CQ8IV04 446 aa22.46■■□□□ 1.19
PSPC1-206ENST00000619300 LCORLQ8N3X6 602 aa22.46■■□□□ 1.19
PSPC1-206ENST00000619300 NAPBQ9H115 298 aa22.46■■□□□ 1.19
PSPC1-206ENST00000619300 GDPD2Q9HCC8 539 aa22.46■■□□□ 1.19
PSPC1-206ENST00000619300 EPB41L4AQ9HCS5 686 aaPredicted RBP22.46■■□□□ 1.19
PSPC1-206ENST00000619300 UBR3Q6ZT12 1888 aa22.46■■□□□ 1.19
PSPC1-206ENST00000619300 ANTXR2P58335 489 aa22.45■■□□□ 1.18
PSPC1-206ENST00000619300 CNPY2Q9Y2B0 182 aa22.45■■□□□ 1.18
PSPC1-206ENST00000619300 COL1A1P02452 1464 aaPredicted RBP22.45■■□□□ 1.18
PSPC1-206ENST00000619300 NACAP1Q9BZK3 213 aa22.45■■□□□ 1.18
PSPC1-206ENST00000619300 GPHNQ9NQX3 736 aaPredicted RBP22.45■■□□□ 1.18
PSPC1-206ENST00000619300 TFCP2L1Q9NZI6 479 aa22.45■■□□□ 1.18
PSPC1-206ENST00000619300 SLC4A4Q9Y6R1 1079 aa22.45■■□□□ 1.18
PSPC1-206ENST00000619300 PDS5AQ29RF7 1337 aaKnown RBP22.44■■□□□ 1.18
PSPC1-206ENST00000619300 CCT2P78371 535 aaKnown RBP22.44■■□□□ 1.18
PSPC1-206ENST00000619300 ST5P78524 1137 aa22.44■■□□□ 1.18
PSPC1-206ENST00000619300 CDC37L1Q7L3B6 337 aa22.44■■□□□ 1.18
PSPC1-206ENST00000619300 MIGA1Q8NAN2 632 aa22.44■■□□□ 1.18
PSPC1-206ENST00000619300 NSUN7Q8NE18 718 aaKnown RBP22.44■■□□□ 1.18
PSPC1-206ENST00000619300 NAP1L2Q9ULW6 460 aaPredicted RBP22.44■■□□□ 1.18
PSPC1-206ENST00000619300 EP400Q96L91 3159 aa22.43■■□□□ 1.18
PSPC1-206ENST00000619300 TNRC6CQ9HCJ0 1690 aaKnown RBP22.43■■□□□ 1.18
PSPC1-206ENST00000619300 PRKAB2O43741 272 aa22.43■■□□□ 1.18
PSPC1-206ENST00000619300 CTDNEP1O95476 244 aa22.43■■□□□ 1.18
PSPC1-206ENST00000619300 HMGN5P82970 282 aaKnown RBP22.43■■□□□ 1.18
PSPC1-206ENST00000619300 ADGRA1Q86SQ6 560 aa22.43■■□□□ 1.18
PSPC1-206ENST00000619300 RPGRQ92834 1020 aaKnown RBP22.43■■□□□ 1.18
PSPC1-206ENST00000619300 DDX11Q96FC9 970 aa22.43■■□□□ 1.18
PSPC1-206ENST00000619300 NSFL1CQ9UNZ2 370 aaKnown RBP22.43■■□□□ 1.18
PSPC1-206ENST00000619300 ZBTB22O15209 634 aa22.42■■□□□ 1.18
PSPC1-206ENST00000619300 DNM1Q05193 864 aaKnown RBP22.42■■□□□ 1.18
PSPC1-206ENST00000619300 CRY2Q49AN0 593 aa22.42■■□□□ 1.18
PSPC1-206ENST00000619300 FAM184AQ8NB25 1140 aa22.42■■□□□ 1.18
PSPC1-206ENST00000619300 NCOA5Q9HCD5 579 aaKnown RBP22.42■■□□□ 1.18
PSPC1-206ENST00000619300 ANKIB1Q9P2G1 1089 aa22.42■■□□□ 1.18
PSPC1-206ENST00000619300 LEMD3Q9Y2U8 911 aa22.42■■□□□ 1.18
PSPC1-206ENST00000619300 MAGEB6P1A0A0J9YX57 407 aa22.41■■□□□ 1.18
PSPC1-206ENST00000619300 PLSCR1O15162 318 aa22.41■■□□□ 1.18
PSPC1-206ENST00000619300 ZSCAN23Q3MJ62 389 aa22.41■■□□□ 1.18
PSPC1-206ENST00000619300 GAS2L3Q86XJ1 694 aa22.41■■□□□ 1.18
PSPC1-206ENST00000619300 BRPF3Q9ULD4 1205 aa22.41■■□□□ 1.18
PSPC1-206ENST00000619300 IRS2Q9Y4H2 1338 aa22.41■■□□□ 1.18
PSPC1-206ENST00000619300 GADD45BO75293 160 aaPredicted RBP22.41■■□□□ 1.18
PSPC1-206ENST00000619300 MRE11P49959 708 aa22.41■■□□□ 1.18
PSPC1-206ENST00000619300 PTPDC1A2A3K4 754 aa22.4■■□□□ 1.18
PSPC1-206ENST00000619300 XRCC6P12956 609 aaKnown RBP eCLIP22.4■■□□□ 1.189e-14■■□□□ 11.4
PSPC1-206ENST00000619300 TDO2P48775 406 aa22.4■■□□□ 1.18
PSPC1-206ENST00000619300 ZNF445P59923 1031 aa22.4■■□□□ 1.18
PSPC1-206ENST00000619300 CSPP1Q1MSJ5 1256 aa22.4■■□□□ 1.18
PSPC1-206ENST00000619300 NAA16Q6N069 864 aaPredicted RBP22.4■■□□□ 1.18
PSPC1-206ENST00000619300 CYB5R4Q7L1T6 521 aa22.4■■□□□ 1.18
PSPC1-206ENST00000619300 TXNRD3Q86VQ6 643 aa22.4■■□□□ 1.18
PSPC1-206ENST00000619300 RBM27Q9P2N5 1060 aaKnown RBP22.4■■□□□ 1.18
PSPC1-206ENST00000619300 KIF3AQ9Y496 699 aa22.4■■□□□ 1.18
PSPC1-206ENST00000619300 KLF18A0A0U1RQI7 1052 aa22.4■■□□□ 1.18
PSPC1-206ENST00000619300 FERMT3Q86UX7 667 aa22.4■■□□□ 1.18
PSPC1-206ENST00000619300 B4E1Z4 1266 aa22.39■■□□□ 1.17
PSPC1-206ENST00000619300 CTDSPL2Q05D32 466 aa22.39■■□□□ 1.17
PSPC1-206ENST00000619300 DDR1Q08345 913 aa22.39■■□□□ 1.17
PSPC1-206ENST00000619300 NKX2-3Q8TAU0 364 aa22.39■■□□□ 1.17
PSPC1-206ENST00000619300 RIOK1Q9BRS2 568 aaKnown RBP22.39■■□□□ 1.17
PSPC1-206ENST00000619300 ANGEL1Q9UNK9 670 aaKnown RBP22.39■■□□□ 1.17
PSPC1-206ENST00000619300 XDHP47989 1333 aa22.39■■□□□ 1.17
PSPC1-206ENST00000619300 H3BQV1 296 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 POLRMTO00411 1230 aaKnown RBP22.38■■□□□ 1.17
PSPC1-206ENST00000619300 DHX16O60231 1041 aaKnown RBP22.38■■□□□ 1.17
PSPC1-206ENST00000619300 AKNAD1Q5T1N1 836 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 IFFO2Q5TF58 517 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 ZNF384Q8TF68 577 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 RBM17Q96I25 401 aaKnown RBP22.38■■□□□ 1.17
PSPC1-206ENST00000619300 TMEM87BQ96K49 555 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 CNNM2Q9H8M5 875 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 GRPEL1Q9HAV7 217 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 TMEM63CQ9P1W3 806 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 HPS5Q9UPZ3 1129 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 NEDD4P46934 1319 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 SALL1Q9NSC2 1324 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 FIBPO43427 364 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 APBA3O96018 575 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 INCENPQ9NQS7 918 aa22.38■■□□□ 1.17
PSPC1-206ENST00000619300 GOLGA8BA8MQT2 603 aa22.37■■□□□ 1.17
PSPC1-206ENST00000619300 UBE2HP62256 183 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms