RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 ALPK3Q96L96 1907 aa11.5□□□□□ -0.57
SYN3-213ENST00000619146 RANBP2P49792 3224 aaKnown RBP11.5□□□□□ -0.57
SYN3-213ENST00000619146 IGKV5-2P06315 115 aa11.49□□□□□ -0.57
SYN3-213ENST00000619146 KCNJ4P48050 445 aa11.49□□□□□ -0.57
SYN3-213ENST00000619146 UBE3BQ7Z3V4 1068 aa11.49□□□□□ -0.57
SYN3-213ENST00000619146 CERS5Q8N5B7 392 aa11.49□□□□□ -0.57
SYN3-213ENST00000619146 HELBQ8NG08 1087 aaPredicted RBP11.49□□□□□ -0.57
SYN3-213ENST00000619146 CNKSR2Q8WXI2 1034 aa11.49□□□□□ -0.57
SYN3-213ENST00000619146 ERO1AQ96HE7 468 aa11.49□□□□□ -0.57
SYN3-213ENST00000619146 PTPN18Q99952 460 aa11.49□□□□□ -0.57
SYN3-213ENST00000619146 ELP3Q9H9T3 547 aa11.49□□□□□ -0.57
SYN3-213ENST00000619146 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
SYN3-213ENST00000619146 BSDC1Q9NW68 430 aaPredicted RBP11.49□□□□□ -0.57
SYN3-213ENST00000619146 ZNF804BA4D1E1 1349 aa11.49□□□□□ -0.57
SYN3-213ENST00000619146 NEURL1BA8MQ27 555 aa11.48□□□□□ -0.57
SYN3-213ENST00000619146 PPP1R12BO60237 982 aaPredicted RBP11.48□□□□□ -0.57
SYN3-213ENST00000619146 TAF5LO75529 589 aa11.48□□□□□ -0.57
SYN3-213ENST00000619146 IGHMBP2P38935 993 aaKnown RBP11.48□□□□□ -0.57
SYN3-213ENST00000619146 RBM5P52756 815 aaKnown RBP eCLIP11.48□□□□□ -0.57
SYN3-213ENST00000619146 SLC4A8Q2Y0W8 1093 aa11.48□□□□□ -0.57
SYN3-213ENST00000619146 ZBED3Q96IU2 234 aaPredicted RBP11.48□□□□□ -0.57
SYN3-213ENST00000619146 TMEM106CQ9BVX2 250 aa11.48□□□□□ -0.57
SYN3-213ENST00000619146 PTCH2Q9Y6C5 1203 aa11.48□□□□□ -0.57
SYN3-213ENST00000619146 COL6A3P12111 3177 aa11.48□□□□□ -0.57
SYN3-213ENST00000619146 H0YGN5 161 aa11.47□□□□□ -0.57
SYN3-213ENST00000619146 GRM8O00222 908 aa11.47□□□□□ -0.57
SYN3-213ENST00000619146 USP2O75604 605 aaPredicted RBP11.47□□□□□ -0.57
SYN3-213ENST00000619146 SP3Q02447 781 aa11.47□□□□□ -0.57
SYN3-213ENST00000619146 CFAP100Q494V2 611 aa11.47□□□□□ -0.57
SYN3-213ENST00000619146 CDAN1Q8IWY9 1227 aa11.47□□□□□ -0.57
SYN3-213ENST00000619146 SH3TC2Q8TF17 1288 aa11.47□□□□□ -0.57
SYN3-213ENST00000619146 PRMT6Q96LA8 375 aaPredicted RBP11.47□□□□□ -0.57
SYN3-213ENST00000619146 MPHOSPH8Q99549 860 aa11.47□□□□□ -0.57
SYN3-213ENST00000619146 USP44Q9H0E7 712 aa11.47□□□□□ -0.57
SYN3-213ENST00000619146 C9orf78Q9NZ63 289 aaPredicted RBP11.47□□□□□ -0.57
SYN3-213ENST00000619146 COL1A1P02452 1464 aaPredicted RBP11.46□□□□□ -0.57
SYN3-213ENST00000619146 GNAI2P04899 355 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 UBTFL1P0CB47 393 aaPredicted RBP11.46□□□□□ -0.57
SYN3-213ENST00000619146 ZBTB48P10074 688 aaPredicted RBP11.46□□□□□ -0.57
SYN3-213ENST00000619146 ITGA6P23229 1130 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 INHBEP58166 350 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 CHRNDQ07001 517 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 GCKRQ14397 625 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 SLC9C1Q4G0N8 1177 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 ARMC5Q96C12 935 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 OPTNQ96CV9 577 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 CCDC136Q96JN2 1154 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 MEIS3Q99687 375 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 CD209Q9NNX6 404 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 LEMD3Q9Y2U8 911 aa11.46□□□□□ -0.57
SYN3-213ENST00000619146 CUL9Q8IWT3 2517 aa11.46□□□□□ -0.58
SYN3-213ENST00000619146 A0A0C4DFX4 3053 aa11.46□□□□□ -0.58
SYN3-213ENST00000619146 UTYO14607 1347 aa11.45□□□□□ -0.58
SYN3-213ENST00000619146 IREB2P48200 963 aaKnown RBP11.45□□□□□ -0.58
SYN3-213ENST00000619146 RASA3Q14644 834 aa11.45□□□□□ -0.58
SYN3-213ENST00000619146 TAF1CQ15572 869 aaPredicted RBP11.45□□□□□ -0.58
SYN3-213ENST00000619146 OTUD7BQ6GQQ9 843 aa11.45□□□□□ -0.58
SYN3-213ENST00000619146 ZNF333Q96JL9 665 aa11.45□□□□□ -0.58
SYN3-213ENST00000619146 ARHGAP39Q9C0H5 1083 aa11.45□□□□□ -0.58
SYN3-213ENST00000619146 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
SYN3-213ENST00000619146 MYO1BO43795 1136 aa11.44□□□□□ -0.58
SYN3-213ENST00000619146 MAP3K11Q16584 847 aa11.44□□□□□ -0.58
SYN3-213ENST00000619146 SUPT20HL1Q3ZLR7 823 aa11.44□□□□□ -0.58
SYN3-213ENST00000619146 CHRDL2Q6WN34 429 aa11.44□□□□□ -0.58
SYN3-213ENST00000619146 RPAP2Q8IXW5 612 aaPredicted RBP11.44□□□□□ -0.58
SYN3-213ENST00000619146 ANKRD2Q9GZV1 360 aa11.44□□□□□ -0.58
SYN3-213ENST00000619146 PTPRFP10586 1907 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 CCL15-CCL14A0A0B4J2E2 113 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 SPDYE2BA6NHP3 402 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 TCP10L2B9ZVM9 353 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 H7C1W4 665 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 NBPF7P0C2Y1 421 aaPredicted RBP11.43□□□□□ -0.58
SYN3-213ENST00000619146 SPDYE6P0CI01 402 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 CCL15Q16663 113 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 ANKRD13AQ8IZ07 590 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 FAM43AQ8N2R8 423 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 BRI3BPQ8WY22 251 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 OTUD5Q96G74 571 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 RWDD1Q9H446 243 aaPredicted RBP11.43□□□□□ -0.58
SYN3-213ENST00000619146 TDRD3Q9H7E2 651 aaKnown RBP11.43□□□□□ -0.58
SYN3-213ENST00000619146 PCDHB15Q9Y5E8 787 aa11.43□□□□□ -0.58
SYN3-213ENST00000619146 HMMRO75330 724 aa11.42□□□□□ -0.58
SYN3-213ENST00000619146 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
SYN3-213ENST00000619146 DPF3Q92784 378 aa11.42□□□□□ -0.58
SYN3-213ENST00000619146 ZNF594Q96JF6 807 aaPredicted RBP11.42□□□□□ -0.58
SYN3-213ENST00000619146 MS4A4AQ96JQ5 239 aa11.42□□□□□ -0.58
SYN3-213ENST00000619146 LRRFIP2Q9Y608 721 aaKnown RBP11.42□□□□□ -0.58
SYN3-213ENST00000619146 IRS2Q9Y4H2 1338 aa11.41□□□□□ -0.58
SYN3-213ENST00000619146 MTFR1Q15390 333 aa11.41□□□□□ -0.58
SYN3-213ENST00000619146 B4GALNT3Q6L9W6 998 aa11.41□□□□□ -0.58
SYN3-213ENST00000619146 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.41□□□□□ -0.58
SYN3-213ENST00000619146 NBPF11Q86T75 865 aa11.41□□□□□ -0.58
SYN3-213ENST00000619146 ANKRD44Q8N8A2 993 aa11.41□□□□□ -0.58
SYN3-213ENST00000619146 MTMR14Q8NCE2 650 aa11.41□□□□□ -0.58
SYN3-213ENST00000619146 TMEM39BQ9GZU3 492 aa11.41□□□□□ -0.58
SYN3-213ENST00000619146 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
SYN3-213ENST00000619146 ZFYVE28Q9HCC9 887 aa11.41□□□□□ -0.58
SYN3-213ENST00000619146 RBM27Q9P2N5 1060 aaKnown RBP11.41□□□□□ -0.58
SYN3-213ENST00000619146 ZNF70Q9UC06 446 aaPredicted RBP11.41□□□□□ -0.58
SYN3-213ENST00000619146 PPP2R3BQ9Y5P8 575 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms