RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 NDUFA8P51970 172 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 IQCB1Q15051 598 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 TTF1Q15361 905 aaPredicted RBP13.07□□□□□ -0.32
TP53-223ENST00000618944 ATL3Q6DD88 541 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 STK11IPQ8N1F8 1099 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 LINC00301Q8NCQ3 95 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 SEC31BQ9NQW1 1179 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 RTEL1Q9NZ71 1219 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 LAMA4Q16363 1823 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 PAPPAQ13219 1627 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 CTAGE5O15320 804 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 SUSD4Q5VX71 490 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 TOGARAM1Q9Y4F4 1720 aa13.07□□□□□ -0.32
TP53-223ENST00000618944 BECN2A8MW95 431 aa13.06□□□□□ -0.32
TP53-223ENST00000618944 STX1AQ16623 288 aa13.06□□□□□ -0.32
TP53-223ENST00000618944 PHKBQ93100 1093 aa13.06□□□□□ -0.32
TP53-223ENST00000618944 AIDAQ96BJ3 306 aa13.06□□□□□ -0.32
TP53-223ENST00000618944 BCL9O00512 1426 aa13.06□□□□□ -0.32
TP53-223ENST00000618944 SHANK3Q9BYB0 1731 aa13.06□□□□□ -0.32
TP53-223ENST00000618944 DYNC1I1O14576 645 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 UBE3CQ15386 1083 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 PUM3Q15397 648 aaKnown RBP13.05□□□□□ -0.32
TP53-223ENST00000618944 ADALQ6DHV7 355 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 SYNE3Q6ZMZ3 975 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 NFXL1Q6ZNB6 911 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 FMR1NBQ8N0W7 255 aaPredicted RBP13.05□□□□□ -0.32
TP53-223ENST00000618944 MAGEB6Q8N7X4 407 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 MRPS27Q92552 414 aaKnown RBP13.05□□□□□ -0.32
TP53-223ENST00000618944 STRBPQ96SI9 672 aaKnown RBP13.05□□□□□ -0.32
TP53-223ENST00000618944 MYL10Q9BUA6 226 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 ANGEL1Q9UNK9 670 aaKnown RBP13.05□□□□□ -0.32
TP53-223ENST00000618944 SPTLC2O15270 562 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 CDC27P30260 824 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.32
TP53-223ENST00000618944 CTDSPL2Q05D32 466 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 CCDC144BQ3MJ40 725 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 MYSM1Q5VVJ2 828 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 MICU3Q86XE3 530 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 ZNF34Q8IZ26 560 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 SPATA5Q8NB90 893 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 MYRIPQ8NFW9 859 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 LPIN2Q92539 896 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 ZNF512BQ96KM6 892 aaPredicted RBP13.05□□□□□ -0.32
TP53-223ENST00000618944 PDCL3Q9H2J4 239 aa13.05□□□□□ -0.32
TP53-223ENST00000618944 TCRBV5S4A2TA0A5A2 114 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 ERVV-1B6SEH8 477 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 MARCKSP29966 332 aaPredicted RBP13.04□□□□□ -0.32
TP53-223ENST00000618944 IL6STP40189 918 aaPredicted RBP13.04□□□□□ -0.32
TP53-223ENST00000618944 MPHOSPH8Q99549 860 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 ALG1Q9BT22 464 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 ARMT1Q9H993 441 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 UBE2Q2LH0YL09 131 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 SH2B2O14492 632 aaPredicted RBP13.04□□□□□ -0.32
TP53-223ENST00000618944 UQCRFS1P1P0C7P4 283 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 ARID4AP29374 1257 aaPredicted RBP13.04□□□□□ -0.32
TP53-223ENST00000618944 BCAMP50895 628 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 KIF23Q02241 960 aaPredicted RBP13.04□□□□□ -0.32
TP53-223ENST00000618944 RASGRF1Q13972 1273 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 ARID5BQ14865 1188 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 DHX40Q8IX18 779 aaKnown RBP13.04□□□□□ -0.32
TP53-223ENST00000618944 NEDD4P46934 1319 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 ABCC12Q96J65 1359 aa13.04□□□□□ -0.32
TP53-223ENST00000618944 BIN1O00499 593 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 PRKAB2O43741 272 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 MBD4O95243 580 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 CAVIN2O95810 425 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 FGFR2P21802 821 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 IFNL3Q8IZI9 196 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 AOPEPQ8N6M6 819 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 CACTINQ8WUQ7 758 aaKnown RBP13.03□□□□□ -0.32
TP53-223ENST00000618944 ANO10Q9NW15 660 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 NWD2Q9ULI1 1742 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 ADAMTS2O95450 1211 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 SLC5A1P13866 664 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 ATP6V1AP38606 617 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 TMEM67Q5HYA8 995 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
TP53-223ENST00000618944 ANO1Q5XXA6 986 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 ISM2Q6H9L7 571 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 INTS5Q6P9B9 1019 aaKnown RBP13.03□□□□□ -0.32
TP53-223ENST00000618944 APOA5Q6Q788 366 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 KCNG4Q8TDN1 519 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 PRIMPOLQ96LW4 560 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 ZSWIM5Q9P217 1185 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 IQSEC3Q9UPP2 1182 aaPredicted RBP13.03□□□□□ -0.32
TP53-223ENST00000618944 MROH5Q6ZUA9 1318 aa13.03□□□□□ -0.32
TP53-223ENST00000618944 KDM4FA0A1W2PPD8 638 aa13.02□□□□□ -0.32
TP53-223ENST00000618944 PATL2C9JE40 543 aaKnown RBP13.02□□□□□ -0.32
TP53-223ENST00000618944 GNL2Q13823 731 aaKnown RBP13.02□□□□□ -0.32
TP53-223ENST00000618944 IGDCC4Q8TDY8 1250 aa13.02□□□□□ -0.32
TP53-223ENST00000618944 ZKSCAN3Q9BRR0 538 aa13.02□□□□□ -0.32
TP53-223ENST00000618944 NAPBQ9H115 298 aa13.02□□□□□ -0.32
TP53-223ENST00000618944 EPB41L4AQ9HCS5 686 aaPredicted RBP13.02□□□□□ -0.32
TP53-223ENST00000618944 TOMM22Q9NS69 142 aa13.02□□□□□ -0.32
TP53-223ENST00000618944 POLR3EQ9NVU0 708 aa13.02□□□□□ -0.32
TP53-223ENST00000618944 TACC3Q9Y6A5 838 aa13.02□□□□□ -0.32
TP53-223ENST00000618944 ZMYM6O95789 1325 aa13.02□□□□□ -0.32
TP53-223ENST00000618944 A0A1W2PQ27 194 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms